BAC Information

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BAC

Clone NameB6Ng01-059F16
Chromosome16 (Build37)
Map Location 68,450,438 - 68,615,323
singlet/doubletdoublet
Overlap geneEG626609
Upstream geneCadm2
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059F16.bB6Ng01-059F16.g
ACCDH880663DH880664
length1,220604
definitionDH880663|Mus musculus domesticus DNA, BAC clone: B6Ng01-059F16, 5' end.DH880664|Mus musculus domesticus DNA, BAC clone: B6Ng01-059F16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,614,082 - 68,615,323)(68,450,438 - 68,451,041)
sequence
gaattcaataattagaaagtacttacatactcacagctcactcattaatg
gtggttaacttaaatgaacactatttttaataaaatctctggcatttctg
ctaagcaatagccttaagaaaaactggaagatatttaattgtagaaaaat
gagaagaaaaaatccaaaagtcttaagtaaaatattatcttttaatttct
atatatcataactgtgtcctttcactttttttttgaaaaacctaaataca
gtattcattatggttacatcttagtttttaaataaaagtgtaagtgaatt
catttgtaaaatattgactaatgaaaatggactaactctctctctttctc
tttcacacacacacatacacacataaacacacacaaacacatacacacac
ttctatgttatgctccaataaaagggaagttcttataacacatcattatt
tcttttgcacataaattaaaatttatgagaatcctttttggccattcatt
tgcttcgactatcttatcatgaagatttcccctctccaaactctcatcat
gtcaaagccagcattcaaatatcttctctctgtggaaggaaggactgttt
cccaagtccctctctttttatcattgggtagttaactgaaagtctgtgtt
tctttttagtatttggaagtttattaaaagaattttcatgtttcatgtaa
ataagaagcaatgaaatcacttaaagtatcgttgtagctggactgcagag
atgacttagccgttaaaagcacatacagctttctgtatgtgcccagcaca
caagttgctattttccattaactttgtcttcaggagatttgctgccctct
tctggacactccaagtgattacagtcacacttgcacagacctacacatat
agagacacatacaaataattaaaatatcaaacaaatcttttattaaaagg
ataacaaaaacatccttaaatttcatcaatgagtttgaatatatgtactt
tggatatgcaagttaatttaaatgaactattaacttccagttaaataaaa
gacaagactaatttcaactatgacaattaagtaattcttaatttggtcca
ccaggaacgtattggataccatcacccaggctgaaattcctcattcgaaa
aatctatcttaattggggtgtgaaccttatacatactctctccattacta
tctccaacctaattgcaaac
gaattcttttccttttttttttactctttaacccttttattaaagtacag
acttcatccacctcccagtcttctcccttacagctccccatcccatacct
ccctccccttttttgtggtatcatataccccaatcccacaatctctccct
ccctttatacctgtcctatacccttgtaaccttttctccaacagagaatg
tcattgcagaagctggagtgtgtcatagtacatttcaaagtaaccctatt
atcaaaattctttgcttgaaaaagttcgttgcaatgatttgttggtatgg
tatatggcctttggtttctgctgctctttagatactggaactttgctagg
agtcctctcagatatcctgttttttcccagtgtcacagagctcctgcagt
tttggatatttaggaccagctccttcatgcagtgcagcatttcatagatg
gaatagagttgggttagatcaattaaaaatcctggatctggatctgagag
gtatctgagctgctaagcccagcagctctcccactctcataccctcagag
ctggctcaccggcaacccccacaactagggccaggcagctacactctaat
gccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_68614082_68615323
seq2: B6Ng01-059F16.b_49_1268 (reverse)

seq1  GTTTGCAATTTTAGGTTTGTAAGATTAAGTAAAATGGAGAAGAGTATGTA  50
      ||||||||  ||||||| |  ||||  |||  ||||||| ||||||||||
seq2  GTTTGCAA--TTAGGTTGG--AGAT--AGT--AATGGAG-AGAGTATGTA  41

seq1  TAAGCTACAACACACAATGTAAGATGAATTATTTCAGAAATGATGAAATT  100
      |||| | | |||| | |  ||||||  ||| ||||   ||||| | ||||
seq2  TAAGGTTC-ACACCCCAATTAAGATAGATT-TTTC--GAATGA-GGAATT  86

seq1  TCAGCCTGGATGATGGTATCAATAACTGTTCTTGTTGATCAAATTAAGAA  150
      ||||||||| |||||||||| |  ||  | || || || |||||||||||
seq2  TCAGCCTGGGTGATGGTATCCAATACGTTCCTGGTGGACCAAATTAAGAA  136

seq1  TTACTGTAATTGTCATAAGTTTGAAATTAGTCTTGTCTTTTATATAAACT  200
      ||||| |||||||||||   ||||||||||||||||||||||| | ||||
seq2  TTACT-TAATTGTCATA--GTTGAAATTAGTCTTGTCTTTTAT-TTAACT  182

seq1  GGAAGTTAATAGTTCATTTTAAATTAACTTGCATATCCAAAGTAACAATA  250
      |||||||||||||||| |||||||||||||||||||||||||||   |||
seq2  GGAAGTTAATAGTTCA-TTTAAATTAACTTGCATATCCAAAGTA--CATA  229

seq1  TATTCAAAACTCATTGATGAAATTTAAGGATGTTTTTGTTATCCTTTTAA  300
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTC-AAACTCATTGATGAAATTTAAGGATGTTTTTGTTATCCTTTTAA  278

seq1  TAAAAGATTTGTTTGATATTTTAATTATTTGTATGTGTCTCTATATGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATTTGTTTGATATTTTAATTATTTGTATGTGTCTCTATATGTGT  328

seq1  AGGTCTGTGCAAGTGTGACTGTAATCACTTGGAGTGTCCAGAAGAGGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGTGCAAGTGTGACTGTAATCACTTGGAGTGTCCAGAAGAGGGCA  378

seq1  GCAAATCTCCTGAAGACAAAGTTAATGGAAAATAGCAACTTGTGTGCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCTCCTGAAGACAAAGTTAATGGAAAATAGCAACTTGTGTGCTGG  428

seq1  GCACATACAGAAAGCTGTATGTGCTTTTAACGGCTAAGTCATCTCTGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATACAGAAAGCTGTATGTGCTTTTAACGGCTAAGTCATCTCTGCAG  478

seq1  TCCAGCTACAACGATACTTTAAGTGATTTCATTGCTTCTTATTTACATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTACAACGATACTTTAAGTGATTTCATTGCTTCTTATTTACATGA  528

seq1  AACATGAAAATTCTTTTAATAAACTTCCAAATACTAAAAAGAAACACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAAAATTCTTTTAATAAACTTCCAAATACTAAAAAGAAACACAGA  578

seq1  CTTTCAGTTAACTACCCAATGATAAAAAGAGAGGGACTTGGGAAACAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGTTAACTACCCAATGATAAAAAGAGAGGGACTTGGGAAACAGTC  628

seq1  CTTCCTTCCACAGAGAGAAGATATTTGAATGCTGGCTTTGACATGATGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCACAGAGAGAAGATATTTGAATGCTGGCTTTGACATGATGAG  678

seq1  AGTTTGGAGAGGGGAAATCTTCATGATAAGATAGTCGAAGCAAATGAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGAGAGGGGAAATCTTCATGATAAGATAGTCGAAGCAAATGAATG  728

seq1  GCCAAAAAGGATTCTCATAAATTTTAATTTATGTGCAAAAGAAATAATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAAAGGATTCTCATAAATTTTAATTTATGTGCAAAAGAAATAATGA  778

seq1  TGTGTTATAAGAACTTCCCTTTTATTGGAGCATAACATAGAAGTGTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTATAAGAACTTCCCTTTTATTGGAGCATAACATAGAAGTGTGTGT  828

seq1  ATGTGTTTGTGTGTGTTTATGTGTGTATGTGTGTGTGTGAAAGAGAAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTTGTGTGTGTTTATGTGTGTATGTGTGTGTGTGAAAGAGAAAGA  878

seq1  GAGAGAGTTAGTCCATTTTCATTAGTCAATATTTTACAAATGAATTCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGTTAGTCCATTTTCATTAGTCAATATTTTACAAATGAATTCACT  928

seq1  TACACTTTTATTTAAAAACTAAGATGTAACCATAATGAATACTGTATTTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTTTATTTAAAAACTAAGATGTAACCATAATGAATACTGTATTTA  978

seq1  GGTTTTTCAAAAAAAAAGTGAAAGGACACAGTTATGATATATAGAAATTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTCAAAAAAAAAGTGAAAGGACACAGTTATGATATATAGAAATTA  1028

seq1  AAAGATAATATTTTACTTAAGACTTTTGGATTTTTTCTTCTCATTTTTCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAATATTTTACTTAAGACTTTTGGATTTTTTCTTCTCATTTTTCT  1078

seq1  ACAATTAAATATCTTCCAGTTTTTCTTAAGGCTATTGCTTAGCAGAAATG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTAAATATCTTCCAGTTTTTCTTAAGGCTATTGCTTAGCAGAAATG  1128

seq1  CCAGAGATTTTATTAAAAATAGTGTTCATTTAAGTTAACCACCATTAATG  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATTTTATTAAAAATAGTGTTCATTTAAGTTAACCACCATTAATG  1178

seq1  AGTGAGCTGTGAGTATGTAAGTACTTTCTAATTATTGAATTC  1242
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGCTGTGAGTATGTAAGTACTTTCTAATTATTGAATTC  1220

seq1: chr16_68450438_68451041
seq2: B6Ng01-059F16.g_68_671

seq1  GAATTCTTTTCCTTTTTTTTTTACTCTTTAACCCTTTTATTAAAGTACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCCTTTTTTTTTTACTCTTTAACCCTTTTATTAAAGTACAG  50

seq1  ACTTCATCCACCTCCCAGTCTTCTCCCTTACAGCTCCCCATCCCATACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATCCACCTCCCAGTCTTCTCCCTTACAGCTCCCCATCCCATACCT  100

seq1  CCCTCCCCTTTTTTGTGGTATCATATACCCCAATCCCACAATCTCTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCTTTTTTGTGGTATCATATACCCCAATCCCACAATCTCTCCCT  150

seq1  CCCTTTATACCTGTCCTATACCCTTGTAACCTTTTCTCCAACAGAGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTATACCTGTCCTATACCCTTGTAACCTTTTCTCCAACAGAGAATG  200

seq1  TCATTGCAGAAGCTGGAGTGTGTCATAGTACATTTCAAAGTAACCCTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCAGAAGCTGGAGTGTGTCATAGTACATTTCAAAGTAACCCTATT  250

seq1  ATCAAAATTCTTTGCTTGAAAAAGTTCGTTGCAATGATTTGTTGGTATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATTCTTTGCTTGAAAAAGTTCGTTGCAATGATTTGTTGGTATGG  300

seq1  TATATGGCCTTTGGTTTCTGCTGCTCTTTAGATACTGGAACTTTGCTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGCCTTTGGTTTCTGCTGCTCTTTAGATACTGGAACTTTGCTAGG  350

seq1  AGTCCTCTCAGATATCCTGTTTTTTCCCAGTGTCACAGAGCTCCTGCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCTCAGATATCCTGTTTTTTCCCAGTGTCACAGAGCTCCTGCAGT  400

seq1  TTTGGATATTTAGGACCAGCTCCTTCATGCAGTGCAGCATTTCATAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATATTTAGGACCAGCTCCTTCATGCAGTGCAGCATTTCATAGATG  450

seq1  GAATAGAGTTGGGTTAGATCAATTAAAAATCCTGGATCTGGATCTGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAGTTGGGTTAGATCAATTAAAAATCCTGGATCTGGATCTGAGAG  500

seq1  GTATCTGAGCTGCTAAGCCCAGCAGCTCTCCCACTCTCATACCCTCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGAGCTGCTAAGCCCAGCAGCTCTCCCACTCTCATACCCTCAGAG  550

seq1  CTGGCTCACCGGCAACCCCCACAACTAGGGCCAGGCAGCTACACTCTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCACCGGCAACCCCCACAACTAGGGCCAGGCAGCTACACTCTAAT  600

seq1  GCCC  604
      ||||
seq2  GCCC  604