BAC Information

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BAC

Clone NameB6Ng01-060B08
Chromosome16 (Build37)
Map Location 41,123,690 - 41,124,850
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneEG667450, Lsamp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060B08.bB6Ng01-060B08.g
ACCDH881166DH881167
length1,1361,171
definitionDH881166|Mus musculus domesticus DNA, BAC clone: B6Ng01-060B08, 5' end.DH881167|Mus musculus domesticus DNA, BAC clone: B6Ng01-060B08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaaatatcctacaatttatattcaaaacatggatgtaaacta
agaagtgttcattttagtttcttgacttagcaaaacccaattaaatagaa
caatttcttctctgtattctgagcttctttggagcatgggacaaactgtg
gattcggagactgatttactccataaccttctcattgtcgctccctgcct
gacagcaatgcaggacttaacatcttcagttctgtgaaaatcataaaaga
gattgtactccagattattcctgccatcctcagaattcttcatcctgctt
acccttctctgatacaaagtttattttctgtatttcaggcatttaacctt
tacattcttctgcaaggacaattctgtttgtttgcttgttcttttgagga
caaaggagaagccatccctaatgaagtggttattcattgatcacttcagt
agaaaacccacacaggctgcaaggaagaacttgaaggcatacaggggctt
gttctctaaccaagtgacttaactctgccagttacttctgcaaatgactg
cctcatcagagtcagaccattttggatatcaaaatgtcatgataattttt
gagttgaaaaactcacaaggattaaattcatcaactcgataacccctcct
atgacctggcatgatcatacctgggctttgcacatttgtttccctgtggc
agagaaagaagcaattctcagctcctggtctgtgctctagctaggccagt
tatggcctgaagcaacaggcgggaattctcctttccctgcctagctgttc
ttccttgatctggggtcctttttaagaaaacaacaggaaaaaaataggaa
aaacctacagtggggcagcctgaagctgcaacacaataatgattattcct
gtcaggtttaactgtggttgctaagttactggtctctctgcaaaccttga
gtatgggacacattaggagctcgtaggtcccagtgacttgcggtaaatgt
acaatttgtccctgtgctaaaacacttctaatacatataaaagatcccac
atggctaaaattgtgaccttctgttgttaccttctcctccctttacacct
cttctcctactgcatgttatatgggaactgcattgg
gaattcttacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcataccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgtcatggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
cttcatagcagcctcatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggagtggatacagaaaatgtggtaaatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggtctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggagggagctagagaaagactcaaggagctaagggatcttgcatcccta
tagtggaacacattatgaactaaccagtacccggagctctggacttctag
ctgcatatgtatcaaagatgctagtcgcatcactggaggaaggccatttg
acacgcaactttaatgtcagtacggggggaccgcaggggccgaaaggggg
atgtggtggggtaagggatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_41123690_41124850
seq2: B6Ng01-060B08.b_45_1180

seq1  GAATTCCACAAATATCCTACAATTTATATTCAAAACATGGATGTAAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAAATATCCTACAATTTATATTCAAAACATGGATGTAAACTA  50

seq1  AGAAGTGTTCATTTTAGTTTCTTGACTTAGCAAAACCCAATTAAATAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGTTCATTTTAGTTTCTTGACTTAGCAAAACCCAATTAAATAGAA  100

seq1  CAATTTCTTCTCTGTATTCTGAGCTTCTTTGGAGCATGGGACAAACTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCTTCTCTGTATTCTGAGCTTCTTTGGAGCATGGGACAAACTGTG  150

seq1  GATTCGGAGACTGATTTACTCCATAACCTTCTCATTGTCGCTCCCTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCGGAGACTGATTTACTCCATAACCTTCTCATTGTCGCTCCCTGCCT  200

seq1  GACAGCAATGCAGGACTTAACATCTTCAGTTCTGTGAAAATCATAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAATGCAGGACTTAACATCTTCAGTTCTGTGAAAATCATAAAAGA  250

seq1  GATTGTACTCCAGATTATTCCTGCCATCCTCAGAATTCTTCATCCTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTACTCCAGATTATTCCTGCCATCCTCAGAATTCTTCATCCTGCTT  300

seq1  ACCCTTCTCTGATACAAAGTTTATTTTCTGTATTTCAGGCATTTAACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCTCTGATACAAAGTTTATTTTCTGTATTTCAGGCATTTAACCTT  350

seq1  TACATTCTTCTGCAAGGACAATTCTGTTTGTTTGCTTGTTCTTTTGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCTTCTGCAAGGACAATTCTGTTTGTTTGCTTGTTCTTTTGAGGA  400

seq1  CAAAGGAGAAGCCATCCCTAATGAAGTGGTTATTCATTGATCACTTCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAGAAGCCATCCCTAATGAAGTGGTTATTCATTGATCACTTCAGT  450

seq1  AGAAAACCCACACAGGCTGCAAGGAAGAACTTGAAGGCATACAGGGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACCCACACAGGCTGCAAGGAAGAACTTGAAGGCATACAGGGGCTT  500

seq1  GTTCTCTAACCAAGTGACTTAACTCTGCCAGTTACTTCTGCAAATGACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTAACCAAGTGACTTAACTCTGCCAGTTACTTCTGCAAATGACTG  550

seq1  CCTCATCAGAGTCAGACCATTTTGGATATCAAAATGTCATGATAATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCAGAGTCAGACCATTTTGGATATCAAAATGTCATGATAATTTTT  600

seq1  GAGTTGAAAAACTCACAAGGATTAAATTCATCAACTCGATAACCCCTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGAAAAACTCACAAGGATTAAATTCATCAACTCGATAACCCCTCCT  650

seq1  ATGACCTGGCATGATCATACCTGGGCTTTGCACATTTGTTTCCCTGTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTGGCATGATCATACCTGGGCTTTGCACATTTGTTTCCCTGTGGC  700

seq1  AGAGAAAGAAGCAATTCTCAGCTCCTGGTCTGTGCTCTAGCTAGGCCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGAAGCAATTCTCAGCTCCTGGTCTGTGCTCTAGCTAGGCCAGT  750

seq1  TATGGCCTGAAGCAACAGGCGGGAATTCTCCTTTCCCTGCCTAGCTGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCCTGAAGCAACAGGCGGGAATTCTCCTTTCCCTGCCTAGCTGTTC  800

seq1  TTCCTTGATCTGGGGTCCTTTTTAAGAAAACAACAGGAAAAAAATAGGAA  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTCCTTGATCTGGGGTCCTTTTTAAGAAAACAACAGGAAAAAAATAGG-A  849

seq1  AAAACCTACAGTGGGGCAGCCTGAAGCTGCAACACAAATAATGATTATTC  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAACCTACAGTGGGGCAGCCTGAAGCTGCAACAC-AATAATGATTATTC  898

seq1  CTGTCAAGGTTTAACTGTGGTTGCTAAGTTACTGGTCTTCTCTGCAAAAC  950
      ||||| ||||||||||||||||||||||||||||||| ||||||| ||||
seq2  CTGTC-AGGTTTAACTGTGGTTGCTAAGTTACTGGTC-TCTCTGC-AAAC  945

seq1  CTTGAAGTATGGGACACATTAGGAGCTCGTTAGGTCCCAGTGACTTGCGG  1000
      |||| |||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTTG-AGTATGGGACACATTAGGAGCTCG-TAGGTCCCAGTGACTTGCGG  993

seq1  TAAATGTACAATTTGTCTCTGTGCTAAACACACTTCAAAAATAACAATAA  1050
      ||||||||||||||||| |||||||||| ||||||| || |        |
seq2  TAAATGTACAATTTGTCCCTGTGCTAAA-ACACTTCTAATA-------CA  1035

seq1  TAAAAAAGAATCCCACATGGCTTAAAAATCTGTGACCTTTCTGTTGTTAC  1100
      || ||||| |||||||||||||  ||||| ||||||| ||||||||||| 
seq2  TATAAAAG-ATCCCACATGGCT--AAAAT-TGTGACC-TTCTGTTGTTA-  1079

seq1  CCTTCTCCTCCCCTTTACACCTCTTCTCCTACTTGCATGTTATTATGGAA  1150
      ||||||||| |||||||||||||||||||||| ||||||||| ||||| |
seq2  CCTTCTCCT-CCCTTTACACCTCTTCTCCTAC-TGCATGTTA-TATGGGA  1126

seq1  ACTGCTATTGG  1161
      ||||| |||||
seq2  ACTGC-ATTGG  1136