BAC Information

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BAC

Clone NameB6Ng01-063C07
Chromosome16 (Build37)
Map Location 79,192,900 - 79,276,421
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039561, Cxadr, Btg3, D16Ertd472e, LOC100039605, 4930570E03Rik, Chodl, Prss7
Downstream geneEG383172, 1700066C05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063C07.bB6Ng01-063C07.g
ACCDH883327DH883328
length1,1291,157
definitionDH883327|Mus musculus domesticus DNA, BAC clone: B6Ng01-063C07, 5' end.DH883328|Mus musculus domesticus DNA, BAC clone: B6Ng01-063C07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,275,268 - 79,276,421)(79,192,900 - 79,194,085)
sequence
gaattctagagaagaacctggattttgccgatggaagagaagggaatttc
tccagccaagaacacaaactaaaactcacaggagttacgctcttaactca
tctctcaccacattgaagaactaaaaatgtgaaacatttgaacataagac
ttcatatctttgcctaacatttgaaacagtttgtggggagcgggtgtggc
ggcagtcccaaaggcgccagggactgtagctaagtcgtatgacttgcacc
tgacttcctcatataagccacaaacatcttgagagctgcgcaggtgcacc
aggataccgatgaatccagtttgatggagatatgcccctgctgccctgat
tagctgaagctgcgtgcctggtgagggggcgtggcctgctgtgcatggat
gagagtataaaaggagtgagaggcccagggttcgagggagatataaacaa
gaagaatcaggactgaataaactgctgttagaaggactggtggtcatgtc
gttcttgctggtcgagagcggacgcgacaacagttaactaaatggtaagt
gcttcagtaactctgagtacagaaattaccatactccaatcaatcaatca
atcaatcaatcaacaaacaaaccaataaataaatagcaagttggtacata
tggacagaaattaacccggacctgctaccctattttgcccacacaaactt
gcagctcgttaattacttcagtctcccaggcttgccactttcctttcagt
tccattgtagaatatagaagaaaacactgattatacctgttccagcgcag
caatggtaacccagcatgaaattactgtaataagataagctggaccatgc
ttttgtaatcttgccaatatcagagtttgatacaataagcatttggttat
ctctgtgagatatactaccttagtctggattaagtgattaagattattgt
ttactgtatcaagtcactcactgtggctagagagatgaatatatcaattg
tcactgctcatacgtagtttatgagagttggcagttagactgggctacat
cggtaccaaacatatgtaacaaagacttttcattggaataaggatgtaaa
tacacccagaaagggtacatttaaatgat
gaattctgtgataattggatagcttaatatacttctaatatttcagaaat
ttatgccatctaatcacttttgaaattgagaaagaattttgggcaagata
tattttagttataaaagacacatatgaccattgaatgatactttcaaatt
atatttgatgcacaaattgaaatttaattttcttagcaatgtttaaacca
gagtatccagtgtcagtatcttgaaataacactacagaatagttttccct
tcaaatttatatttaaatataggaaatcatcctataattcaccatgtgtt
ttttagagacacatttttacaaaaatattgtcattattttatgctaatta
ctatccaaacatttttgttgtacaaacaatcttttattgtggcattttct
tatcttatctgcatatagtacaacttgatcatattaatttttcatatttc
ttgctcatatgttcactcaatcttaccttgggaccattaatatctttaaa
atacttaacatctttaaaatatgccccattatcttgaatgtccttttaat
aattacctacctagattccacatttaagagaagatatgtgatttttgtct
tttaaggtattaaatattttacttaatgttataatgctcaattttatcta
cttcttgcaagaaaatatattattcattttatggctaactgtccagtgtg
catcctgatttaccttgatggtggctaactaaaagagaatagccatcaat
agtctaacttacatgtgaacttacaaacttcaatttataggtgtgtccat
tgattggcacagaagtagtatgacaattatagacataaccagccactctg
taattagatttgaggactgctccacagagagagatctcatgtttcctatt
gtaatcccagttaaaactcatagttgagaaagtcatagttgtaagtggga
acatactatactgtgtagactaagtgatgtgttaaatttcttcaatctat
gtatctattttatcacagctatttctcatcttaatactagagaattctct
ttcagcactggaatgagggtagagactacgactgctcatggtgtgagagt
acgattgtcagtgatcagtcttagcagacattatgtaacccttcctttaa
tctcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_79275268_79276421
seq2: B6Ng01-063C07.b_43_1171 (reverse)

seq1  ATCATTTTAAAATGGTACCCTTTTCTGGGGTGTATTTTACATCTTTATCC  50
      |||||||  |||| |||||| ||||| ||||||| |||||||| |||| |
seq2  ATCATTT--AAAT-GTACCC-TTTCT-GGGTGTA-TTTACATCCTTATTC  44

seq1  CATTGGGAAAAGTCTTTGTGTACCATATGTTTTGGGTAACGGATGTAGCA  100
      || |  ||||||||||||| || |||||||||  ||| || |||||||| 
seq2  CAAT--GAAAAGTCTTTGT-TA-CATATGTTT--GGT-ACCGATGTAGCC  87

seq1  CAGTTCTAAACTTGCCAACTCTTCATAAACATACGTTATGAGCAGTGAAC  150
      ||| |||||   ||||||||| |||||||| |||| ||||||||||||  
seq2  CAG-TCTAA--CTGCCAACTC-TCATAAAC-TACG-TATGAGCAGTGA--  129

seq1  CATTTGATATATTCATCTCTCTAGCCACAGTGAGTGACTTGATACAGTAA  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGATATATTCATCTCTCTAGCCACAGTGAGTGACTTGATACAGTAA  179

seq1  ACAATTATTCTAATTCACTTAATCCAGACTAAGGTAGTATATCTCACAGA  250
      |||| || ||| | ||||||||||||||||||||||||||||||||||||
seq2  ACAA-TAATCTTAATCACTTAATCCAGACTAAGGTAGTATATCTCACAGA  228

seq1  GATAA-CAAATGCTTATTGATATCAAACTCTGATATTTGGCAAAGATTAC  299
      ||||| ||||||||||||| ||||||||||||||| ||||| ||||||||
seq2  GATAACCAAATGCTTATTG-TATCAAACTCTGATA-TTGGC-AAGATTAC  275

seq1  AAAAGCATGGTCCAGCTTATCTTATTACAGTAATTTCATGCTGGGTTACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATGGTCCAGCTTATCTTATTACAGTAATTTCATGCTGGGTTACC  325

seq1  ATTGCTGCGCTGGAACAGGTATAATCAGTGTTTTCTTCTATATTCTACAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGCGCTGGAACAGGTATAATCAGTGTTTTCTTCTATATTCTACAA  375

seq1  TGGAACTGAAAAGGAAAGTGGCAAGCCTGGGAGACTGAAGTAATTAACGA  449
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTG-AAAGGAAAGTGGCAAGCCTGGGAGACTGAAGTAATTAACGA  424

seq1  GCTGCAAGTTTGTGTGGGCAAAATAGGGTAGCAGGTCCGGGTTAATTTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAAGTTTGTGTGGGCAAAATAGGGTAGCAGGTCCGGGTTAATTTCT  474

seq1  GTCCATATGTACCAACTTGCTATTTATTTATTGGTTTGTTTGTTGATTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATATGTACCAACTTGCTATTTATTTATTGGTTTGTTTGTTGATTGA  524

seq1  TTGATTGATTGATTGATTGGAGTATGGTAATTTCTGTACTCAGAGTTACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGATTGATTGATTGGAGTATGGTAATTTCTGTACTCAGAGTTACT  574

seq1  GAAGCACTTACCATTTAGTTAACTGTTGTCGCGTCCGCTCTCGACCAGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACTTACCATTTAGTTAACTGTTGTCGCGTCCGCTCTCGACCAGCA  624

seq1  AGAACGACATGACCACCAGTCCTTCTAACAGCAGTTTATTCAGTCCTGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGACATGACCACCAGTCCTTCTAACAGCAGTTTATTCAGTCCTGAT  674

seq1  TCTTCTTGTTTATATCTCCCTCGAACCCTGGGCCTCTCACTCCTTTTATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGTTTATATCTCCCTCGAACCCTGGGCCTCTCACTCCTTTTATA  724

seq1  CTCTCATCCATGCACAGCAGGCCACGCCCCCTCACCAGGCACGCAGCTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATCCATGCACAGCAGGCCACGCCCCCTCACCAGGCACGCAGCTTC  774

seq1  AGCTAATCAGGGCAGCAGGGGCATATCTCCATCAAACTGGATTCATCGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATCAGGGCAGCAGGGGCATATCTCCATCAAACTGGATTCATCGGT  824

seq1  ATCCTGGTGCACCTGCGCAGCTCTCAAGATGTTTGTGGCTTATATGAGGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGTGCACCTGCGCAGCTCTCAAGATGTTTGTGGCTTATATGAGGA  874

seq1  AGTCAGGTGCAAGTCATACGACTTAGCTACAGTCCCTGGCGCCTTTGGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGTGCAAGTCATACGACTTAGCTACAGTCCCTGGCGCCTTTGGGA  924

seq1  CTGCCGCCACACCCGCTCCCCACAAACTGTTTCAAATGTTAGGCAAAGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGCCACACCCGCTCCCCACAAACTGTTTCAAATGTTAGGCAAAGAT  974

seq1  ATGAAGTCTTATGTTCAAATGTTTCACATTTTTAGTTCTTCAATGTGGTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTCTTATGTTCAAATGTTTCACATTTTTAGTTCTTCAATGTGGTG  1024

seq1  AGAGATGAGTTAAGAGCGTAACTCCTGTGAGTTTTAGTTTGTGTTCTTGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGAGTTAAGAGCGTAACTCCTGTGAGTTTTAGTTTGTGTTCTTGG  1074

seq1  CTGGAGAAATTCCCTTCTCTTCCATCGGCAAAATCCAGGTTCTTCTCTAG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAAATTCCCTTCTCTTCCATCGGCAAAATCCAGGTTCTTCTCTAG  1124

seq1  AATTC  1154
      |||||
seq2  AATTC  1129

seq1: chr16_79192900_79194085
seq2: B6Ng01-063C07.g_68_1224

seq1  GAATTCTGTGATAATTGGATAGCTTAATATACTTCTAATATTTCAGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGATAATTGGATAGCTTAATATACTTCTAATATTTCAGAAAT  50

seq1  TTATGCCATCTAATCACTTTTGAAATTGAGAAAGAATTTTGGGCAAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCCATCTAATCACTTTTGAAATTGAGAAAGAATTTTGGGCAAGATA  100

seq1  TATTTTAGTTATAAAAGACACATATGACCATTGAATGATACTTTCAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGTTATAAAAGACACATATGACCATTGAATGATACTTTCAAATT  150

seq1  ATATTTGATGCACAAATTGAAATTTAATTTTCTTAGCAATGTTTAAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGATGCACAAATTGAAATTTAATTTTCTTAGCAATGTTTAAACCA  200

seq1  GAGTATCCAGTGTCAGTATCTTGAAATAACACTACAGAATAGTTTTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATCCAGTGTCAGTATCTTGAAATAACACTACAGAATAGTTTTCCCT  250

seq1  TCAAATTTATATTTAAATATAGGAAATCATCCTATAATTCACCATGTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTATATTTAAATATAGGAAATCATCCTATAATTCACCATGTGTT  300

seq1  TTTTAGAGACACATTTTTACAAAAATATTGTCATTATTTTATGCTAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAGACACATTTTTACAAAAATATTGTCATTATTTTATGCTAATTA  350

seq1  CTATCCAAACATTTTTGTTGTACAAACAATCTTTTATTGTGGCATTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCAAACATTTTTGTTGTACAAACAATCTTTTATTGTGGCATTTTCT  400

seq1  TATCTTATCTGCATATAGTACAACTTGATCATATTAATTTTTCATATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTATCTGCATATAGTACAACTTGATCATATTAATTTTTCATATTTC  450

seq1  TTGCTCATATGTTCACTCAATCTTACCTTGGGACCATTAATATCTTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCATATGTTCACTCAATCTTACCTTGGGACCATTAATATCTTTAAA  500

seq1  ATACTTAACATCTTTAAAATATGCCCCATTATCTTGAATGTCCTTTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAACATCTTTAAAATATGCCCCATTATCTTGAATGTCCTTTTAAT  550

seq1  AATTACCTACCTAGATTCCACATTTAAGAGAAGATATGTGATTTTTGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCTACCTAGATTCCACATTTAAGAGAAGATATGTGATTTTTGTCT  600

seq1  TTTAAGGTATTAAATATTTTACTTAATGTTATAATGCTCAATTTTATCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGTATTAAATATTTTACTTAATGTTATAATGCTCAATTTTATCTA  650

seq1  CTTCTTGCAAGAAAATATATTATTCATTTTATGGCTAACTGTCCAGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGCAAGAAAATATATTATTCATTTTATGGCTAACTGTCCAGTGTG  700

seq1  CATCCTGATTTACCTTGATGGTGGCTAACTAAAAGAGAATAGCCATCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGATTTACCTTGATGGTGGCTAACTAAAAGAGAATAGCCATCAAT  750

seq1  AGTCTAACTTACATGTGAACTTACAAACTTCAATTTATAGGTGTGTCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAACTTACATGTGAACTTACAAACTTCAATTTATAGGTGTGTCCAT  800

seq1  TGATTGGCACAGAAGTAGTATGACAATTATAGACATAACCAGCCACTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGCACAGAAGTAGTATGACAATTATAGACATAACCAGCCACTCTG  850

seq1  TAATTAGATTTGAGGACTGCTCCACAGAAGAGAGATCTCATGTTTCCTAT  900
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAATTAGATTTGAGGACTGCTCCACAG-AGAGAGATCTCATGTTTCCTAT  899

seq1  TGTAATCCCAGTTAAAAACTCATAGTTGAGAAAGTCATAGTTGTAAGGTG  950
      ||||||||||||| |||||||||||||||||||||||||||||||| |||
seq2  TGTAATCCCAGTT-AAAACTCATAGTTGAGAAAGTCATAGTTGTAA-GTG  947

seq1  GGAACATACTATACTGTTGTAAGACTAAAGTGATGTGGTTAAAATTTCCT  1000
      |||||||||||||||| ||| ||||| ||||||||| ||||||  || ||
seq2  GGAACATACTATACTG-TGT-AGACT-AAGTGATGT-GTTAAA--TTTCT  991

seq1  TCCAAATTCCTATGTATCTATTTATATCCACAGCTATTTCTCATCTTAAA  1050
      ||  |||  |||||||||||||| ||| ||||||||||||||||||| ||
seq2  TC--AAT--CTATGTATCTATTT-TAT-CACAGCTATTTCTCATCTT-AA  1034

seq1  TAACTTAGAGAATTCTCTTTTCAGCAACTGGAAATGAGTGTAGAGACTTA  1100
      ||   |||||||||||| ||||||| ||||| |||||| |||||||| ||
seq2  TA--CTAGAGAATTCTC-TTTCAGC-ACTGG-AATGAGGGTAGAGAC-TA  1078

seq1  CGACTGCTCAATGTGGTGAGAGTTACGATATGTTCCAGTGATCAGTTCTA  1150
      ||||||||| |||  ||||||| |||||| |||  |||||||||| ||| 
seq2  CGACTGCTC-ATGGTGTGAGAG-TACGAT-TGT--CAGTGATCAG-TCTT  1122

seq1  AGCAAGTCATT-TATGACACTTTCTTTAAATCTCAGA  1186
      ||| || |||| | | || ||| |||| |||||||||
seq2  AGC-AGACATTATGTAACCCTTCCTTT-AATCTCAGA  1157