BAC Information

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BAC

Clone NameB6Ng01-063F10
Chromosome16 (Build37)
Map Location 58,073,294 - 58,074,452
singlet/doubletsinglet
Overlap geneLOC100043477
Upstream geneTomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480, LOC629342
Downstream geneDcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063F10.bB6Ng01-063F10.g
ACCDH883465DH883466
length1,1301,170
definitionDH883465|Mus musculus domesticus DNA, BAC clone: B6Ng01-063F10, 5' end.DH883466|Mus musculus domesticus DNA, BAC clone: B6Ng01-063F10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaaacattatgttgtttttgattcacaagttttattgagttc
attaattcatacatttgattctctgtcacacattatttttctcttctcca
gtttcatttgctcattatgaaatattgcctcttgatacataagttggaag
caaagcaataacagaatttaaatctttaaacaaatgtattataccctgtc
tcaaagaaaaagtattaaacttaatcctttactggtgaaaggtaagtgcc
acagctcatctgtggacaccacaggacaacttccaggagtcagttccctc
catctatcatgtgggtgccagagatgaaattcaggtcctcagactttgtg
gcaagcatcatcacccaccgagctgtcttactggcttcagagtttaaatc
ttttactaataaaataatttatccaaatttagcttttatgctcttttcat
tctggatacagctaattttaaatcttttaaaagtcagttgtgtctttcct
gattcttttttgtttggcttcacaggccatttttgaacttgagtcataga
caaattgcaaatttatagcattcatattttcattttggttgaacagtgtt
tattctgtctttattatttgtctttgtaaaatgtgatctcataccagaca
gaacatagggcttcattaaaaaaaatgtgatcagtgattgtatatcagaa
tatcattgttattcttccatctctccgaagaacgctccccttttagccat
gtcttacaccttttgaaaacttctctcctgaaaactgggatagatgtctg
gccaagaacattgctcacattctccaaagctacagtcacttacattgact
aaggctgagtttcttggtgcaaaataattcatttaatagaatattcctgt
aaatatatgtggtcagataaggttaaggtaatctgatgggggtctattac
tataaaaaaccttaatggactgggttatccctaaatataggtatacatga
attttctactatcatgatcacttcttttcccattattaaagtttgtgatt
tacatgcaaagcagatactctttctaatatgtatgataaaatggtgaata
ttaattgacagtaaggtaatatgtatataa
gaattctcacctgaggaataccgaatggcagagaagcatctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttttacaaccactctggaaatcagtctggcggttcctca
gaaaactggatatcgtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctatgaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatatccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgacgtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggaggtacagagacaaagtttggagctgagataa
aaagatggaccatgtagagactgccatatccggggatccatcccctaatc
agctttccaaatgctgacaccattgcatacactagcaggattattgctga
gaggaccctgatttagctgtctcttgtcagaagtttgcctgggcctagca
aacatagaagtggatgctcacagtcggctattggatggatcacatggccc
caatgaaggagctatagaaagtacccacgaagctaaagggatcctgcacc
ctatagtggatcaacattatgaactacagtacccggagctcctgacttct
gctgctatatgattcaagattgcctaggcgcatcactgaagaagggccat
tggacacccaactttatttgcccagttacagggaacccctggacataaaa
gggatgggtggtgtagggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58073294_58074452
seq2: B6Ng01-063F10.b_46_1175

seq1  GAATTCTTTAAACATTATGTTGTTTTTGATTCACAAGTTTTATTGAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAACATTATGTTGTTTTTGATTCACAAGTTTTATTGAGTTC  50

seq1  ATTAATTCATACATTTGATTCTCTGTCACACATTATTTTTCTCTTCTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTCATACATTTGATTCTCTGTCACACATTATTTTTCTCTTCTCCA  100

seq1  GTTTCATTTGCTCATTATGAAATATTGCCTCTTGATACATAAGTTGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATTTGCTCATTATGAAATATTGCCTCTTGATACATAAGTTGGAAG  150

seq1  CAAAGCAATAACAGAATTTAAATCTTTAAACAAATGTATTATACCCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAATAACAGAATTTAAATCTTTAAACAAATGTATTATACCCTGTC  200

seq1  TCAAAGAAAAAGTATTAAACTTAATCCTTTACTGGTGAAAGGTAAGTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAAAAGTATTAAACTTAATCCTTTACTGGTGAAAGGTAAGTGCC  250

seq1  ACAGCTCATCTGTGGACACCACAGGACAACTTCCAGGAGTCAGTTCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCATCTGTGGACACCACAGGACAACTTCCAGGAGTCAGTTCCCTC  300

seq1  CATCTATCATGTGGGTGCCAGAGATGAAATTCAGGTCCTCAGACTTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATCATGTGGGTGCCAGAGATGAAATTCAGGTCCTCAGACTTTGTG  350

seq1  GCAAGCATCATCACCCACCGAGCTGTCTTACTGGCTTCAGAGTTTAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCATCATCACCCACCGAGCTGTCTTACTGGCTTCAGAGTTTAAATC  400

seq1  TTTTACTAATAAAATAATTTATCCAAATTTAGCTTTTATGCTCTTTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTAATAAAATAATTTATCCAAATTTAGCTTTTATGCTCTTTTCAT  450

seq1  TCTGGATACAGCTAATTTTAAATCTTTTAAAAGTCAGTTGTGTCTTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATACAGCTAATTTTAAATCTTTTAAAAGTCAGTTGTGTCTTTCCT  500

seq1  GATTCTTTTTTGTTTGGCTTCACAGGCCATTTTTGAACTTGAGTCATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTTTTTGTTTGGCTTCACAGGCCATTTTTGAACTTGAGTCATAGA  550

seq1  CAAATTGCAAATTTATAGCATTCATATTTTCATTTTGGTTGAACAGTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGCAAATTTATAGCATTCATATTTTCATTTTGGTTGAACAGTGTT  600

seq1  TATTCTGTCTTTATTATTTGTCTTTGTAAAATGTGATCTCATACCAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGTCTTTATTATTTGTCTTTGTAAAATGTGATCTCATACCAGACA  650

seq1  GAACATAGGGCTTCATTAAAAAAAATGTGATCAGTGATTGTATATCAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATAGGGCTTCATTAAAAAAAATGTGATCAGTGATTGTATATCAGAA  700

seq1  TATCATTGTTATTCTTCCATCTCTCCGAAGAACGCTCCCCTTTTAGCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTGTTATTCTTCCATCTCTCCGAAGAACGCTCCCCTTTTAGCCAT  750

seq1  GTCTTACACCTTTTGAAAACTTCTCTCCTGAAAACTGGGATAGATGTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTACACCTTTTGAAAACTTCTCTCCTGAAAACTGGGATAGATGTCTG  800

seq1  GCCAAGAACATTGCTCACATTCTCCAAAGCTACAGTCACTTACATTGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAACATTGCTCACATTCTCCAAAGCTACAGTCACTTACATTGACT  850

seq1  AAGGCTGAGTTTTCTTGGTGCAAAATAATTCAATTTAATAGAATATTCCT  900
      ||||||||| ||||||||||||||||||||| ||||||||||||||||||
seq2  AAGGCTGAG-TTTCTTGGTGCAAAATAATTC-ATTTAATAGAATATTCCT  898

seq1  GTAAATATATGTGGTCAGATAAGGTTAAGGTAAATCTGATGGGGGTCTAT  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTAAATATATGTGGTCAGATAAGGTTAAGGT-AATCTGATGGGGGTCTAT  947

seq1  TAACTATAAAAAAACCTTAAATGGACTGGGTTTAATCCCCTAAAATTATA  1000
      | ||||| |||||||||| |||||||||||||  || |||||||  ||||
seq2  T-ACTAT-AAAAAACCTT-AATGGACTGGGTT--AT-CCCTAAA--TATA  989

seq1  GGTATACATGAATTTTTCTACTAATCATTGATCACTTCTTTTCCCCATTA  1050
      |||||||||||| ||||||||| |||| |||||||||||||| |||||||
seq2  GGTATACATGAA-TTTTCTACT-ATCA-TGATCACTTCTTTT-CCCATTA  1035

seq1  TTAAAGTTTGTGAATTTACATGCCAAAGCAGATACTCTTTCTAAATATGT  1100
      |||||||||||| ||||||||| ||||||||||||||||||| |||||||
seq2  TTAAAGTTTGTG-ATTTACATG-CAAAGCAGATACTCTTTCT-AATATGT  1082

seq1  AATGATTACAAAAT-GTGAAATTATTACATGACAGTAAGAGGTAATTAAA  1149
       |||||   ||||| |||||  |||||  ||||||||  |||||||   |
seq2  -ATGAT---AAAATGGTGAA--TATTAATTGACAGTA--AGGTAAT---A  1121

seq1  TGTATTATAA  1159
      |||| |||||
seq2  TGTA-TATAA  1130