BAC Information

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BAC

Clone NameB6Ng01-064O09
Chromosome16 (Build37)
Map Location 43,359,113 - 43,494,268
singlet/doubletdoublet
Overlap genenone
Upstream geneBC002163, LOC667484
Downstream geneZbtb20, LOC100043314, Drd3, Qtrtd1, 2610015P09Rik, Zdhhc23, Gramd1c, Atp6v1a, Nat13, Gm608, Sidt1, Ccdc52, Wdr52, Boc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064O09.bB6Ng01-064O09.g
ACCDH884549DH884550
length1,1111,130
definitionDH884549|Mus musculus domesticus DNA, BAC clone: B6Ng01-064O09, 5' end.DH884550|Mus musculus domesticus DNA, BAC clone: B6Ng01-064O09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,493,149 - 43,494,268)(43,359,113 - 43,360,256)
sequence
gaattcaactaatgtgtcaagtacagtcattctgcacaatgacgttgacc
gtgaggttctatgtgctacacttttgactggaaatattttaagttaaagc
aagctattcataaaattacataaacataaatatgcatacttgacagacat
gcatttgcacatccttaaaattaatgcaaagaaagatacattcctttgtt
ctactggagtaaaaatggtgaagactaatgaatgaataaataaagcacca
ggtagccaaatcaatgtctgctcaattctggtcaaggaggtgaagtgagg
tttccttttgagtcagagaatgtaatggataaaaggacgagaatagctgg
ggggatttcctgaggccattgcagaccagctcagacgctgttaagaggct
cattttcatgagacttttggttgcatttgtcacacttgctttaggtcccc
tggagcattaggtgccacatcacagcacagcaagaacaaggctaaacaca
cgaagggacatgctaaggctttctcttttcagacacagatggcctggagt
tggtagatactttcaaaactggattttttttaaattttaattttaatttt
tttgcttctccttctgaactctttccttcaaataggactaagcagaagat
attttttttcaattaaaaaaatctaatttctcttttgtaaacaaactatc
accactaaaatttcattggtataatgattcccataggtgaaagacatttt
gcaaaagaagaaaaaaaaataatgaatcttgaccggacagtaagtttgtt
ctagattaaggatttagctacagtttggtgcatatttgttctccattagg
cttggtacatatttcaacttttcactattatattaaattattaataattt
gaaattagtagctggtgctgccaccacttttctgaaatagtgccagtcat
ttcttctaagtttgttcagaacaaaaaatctgaaatctaatttgtcaaga
aaatgaatggtgagtgaggaagaagatagcagtcgcacaagaagaagtca
atctctgacttctcagctgaagctcagctcgaacggaaaggtagggaccc
tgcttccaggg
gaattcagtaatcttcagcagttaaatttattggatccatatagcaatac
agatgtatactttgactctctcttgaaatagaaaaagagattggcctcac
aggtgatatatctagcaaatttcaaacaaacaaacaaaaaatttaaccta
gaactttctgtgagccacagcttgtcaaaaccactccgcttccaaaagcc
aatcataagttaccttggaaaacaaatagggtattttcagtctctcagtc
agagatttggagaagagctaccacaagaatctgcaacatgtttagcagca
caccctgagatactgcctgtaccatcaacctgttacttaaccagatatgg
ataaactaagtgaactctggagatgaaattcccagaacctaagtgttaac
agagtatctaaaatgtagcagcctttattctgagctgagttgaaggcaga
tgaaatattaacagcaagttctagcagcagaaaatgaaatatgagatcct
gtatcagaaattattagtaacctgttaaaagaaatgctgaaaaatggcag
ttaccaaattaaaactgggaaacagagcccaaatgggaaatttcaaaaag
tttggaggaaaataaatgacagattgtcctcttggctcttattactatgc
catcctaaatcctacttggcaatggatggtggaggtgaaataagagcggc
atccctgccagcgttggtcctcagatttgtagtcctaagtgtctgtgatg
gtgtctggggctgactggaaacgtagttgggagttgatagcatttgagct
ttatctaaattgaagagcctggagactcttattatgaaaggcttcctctc
attgtgaattggccctttgctccactttggatggctggcttcctccatgc
agagctatactaaatgttctacatgggaaagctattctccttaaatgcct
tcaaatttaaagcatctatctgatatgttcatgtttatgactcaaaattt
ctacatcaaaagaagagggggtacaaatagaaatgccagcagtaaatgag
gagatatttttcctccgtactgaaaaaaaaaattatttttatgctgagtg
tttgagctttgatgctaggggagaaaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_43493149_43494268
seq2: B6Ng01-064O09.b_47_1157 (reverse)

seq1  CCCTGGAAGCAGGGGTCCCCCTACCTCTCAGTCTGAGCTGAGGGCTCAGC  50
      ||||||||||||||    |||||||| || ||  ||||||| |  |||||
seq2  CCCTGGAAGCAGGG---TCCCTACCTTTCCGTTCGAGCTGA-GCTTCAGC  46

seq1  TGAGGAAGTCTGAGATTGACTTTCTTCTTGTGCCGACTGCTATCTTCTTC  100
      ||| |||||| ||||||||| ||||||||||| |||||||||||||||||
seq2  TGA-GAAGTCAGAGATTGAC-TTCTTCTTGTG-CGACTGCTATCTTCTTC  93

seq1  CTCAACTTCACATTCATTTTCTTGACAAATTAGATTTCAGATTTTTTTGT  150
      ||| |||   ||||||||||||||||||||||||||||||| ||||||||
seq2  CTC-ACTCACCATTCATTTTCTTGACAAATTAGATTTCAGA-TTTTTTGT  141

seq1  TCTGAACAAACTTAGAAGAAATGACTGGCACTATTTCAGAAAAGTGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACAAACTTAGAAGAAATGACTGGCACTATTTCAGAAAAGTGGTGG  191

seq1  CAGCACCAGCTACTAATTTCAAATTATTAATAATTTAATATAATAGTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCAGCTACTAATTTCAAATTATTAATAATTTAATATAATAGTGAA  241

seq1  AAGTTGAAATATGTACCAAGCCTAATGGAGAACAAATATGCACCAAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAAATATGTACCAAGCCTAATGGAGAACAAATATGCACCAAACTG  291

seq1  TAGCTAAATCCTTAATCTAGAACAAACTTACTGTCCGGTCAAGATTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAAATCCTTAATCTAGAACAAACTTACTGTCCGGTCAAGATTCATT  341

seq1  ATTTTTTTTTCTTCTTTTGCAAAATGTCTTTCACCTATGGGAATCATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTCTTCTTTTGCAAAATGTCTTTCACCTATGGGAATCATTAT  391

seq1  ACCAATGAAATTTTAGTGGTGATAGTTTGTTTACAAAAGAGAAATTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGAAATTTTAGTGGTGATAGTTTGTTTACAAAAGAGAAATTAGAT  441

seq1  TTTTTTAATTGAAAAAAAATATCTTCTGCTTAGTCCTATTTGAAGGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATTGAAAAAAAATATCTTCTGCTTAGTCCTATTTGAAGGAAAG  491

seq1  AGTTCAGAAGGAGAAGCAAAAAAATTAAAATTAAAATTTAAAAAAAATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGAAGGAGAAGCAAAAAAATTAAAATTAAAATTTAAAAAAAATCC  541

seq1  AGTTTTGAAAGTATCTACCAACTCCAGGCCATCTGTGTCTGAAAAGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGAAAGTATCTACCAACTCCAGGCCATCTGTGTCTGAAAAGAGAA  591

seq1  AGCCTTAGCATGTCCCTTCGTGTGTTTAGCCTTGTTCTTGCTGTGCTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTAGCATGTCCCTTCGTGTGTTTAGCCTTGTTCTTGCTGTGCTGTG  641

seq1  ATGTGGCACCTAATGCTCCAGGGGACCTAAAGCAAGTGTGACAAATGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCACCTAATGCTCCAGGGGACCTAAAGCAAGTGTGACAAATGCAA  691

seq1  CCAAAAGTCTCATGAAAATGAGCCTCTTAACAGCGTCTGAGCTGGTCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGTCTCATGAAAATGAGCCTCTTAACAGCGTCTGAGCTGGTCTGC  741

seq1  AATGGCCTCAGGAAATCCCCCCAGCTATTCTCGTCCTTTTATCCATTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCTCAGGAAATCCCCCCAGCTATTCTCGTCCTTTTATCCATTACA  791

seq1  TTCTCTGACTCAAAAGGAAACCTCACTTCACCTCCTTGACCAGAATTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGACTCAAAAGGAAACCTCACTTCACCTCCTTGACCAGAATTGAG  841

seq1  CAGACATTGATTTGGCTACCTGGTGCTTTATTTATTCATTCATTAGTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATTGATTTGGCTACCTGGTGCTTTATTTATTCATTCATTAGTCTT  891

seq1  CACCATTTTTACTCCAGTAGAACAAAGGAATGTATCTTTCTTTGCATTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTTTTACTCCAGTAGAACAAAGGAATGTATCTTTCTTTGCATTAA  941

seq1  TTTTAAGGATGTGCAAATGCATGTCTGTCAAGTATGCATATTTATGTTTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGGATGTGCAAATGCATGTCTGTCAAGTATGCATATTTATGTTTA  991

seq1  TGTAATTTTATGAATAGCTTGCTTTAACTTAAAATATTTCCAGTCAAAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTTTATGAATAGCTTGCTTTAACTTAAAATATTTCCAGTCAAAAG  1041

seq1  TGTAGCACATAGAACCTCACGGTCAACGTCATTGTGCAGAATGACTGTAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCACATAGAACCTCACGGTCAACGTCATTGTGCAGAATGACTGTAC  1091

seq1  TTGACACATTAGTTGAATTC  1120
      ||||||||||||||||||||
seq2  TTGACACATTAGTTGAATTC  1111

seq1: chr16_43359113_43360256
seq2: B6Ng01-064O09.g_70_1199

seq1  GAATTCAGTAATCTTCAGCAGTTAAATTTATTGGATCCATATAGCAATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAATCTTCAGCAGTTAAATTTATTGGATCCATATAGCAATAC  50

seq1  AGATGTATACTTTGACTCTCTCTTGAAATAGAAAAAGAGATTGGCCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTATACTTTGACTCTCTCTTGAAATAGAAAAAGAGATTGGCCTCAC  100

seq1  AGGTGATATATCTAGCAAATTTCAAACAAACAAACAAAAAATTTAACCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATATATCTAGCAAATTTCAAACAAACAAACAAAAAATTTAACCTA  150

seq1  GAACTTTCTGTGAGCCACAGCTTGTCAAAACCACTCCGCTTCCAAAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTCTGTGAGCCACAGCTTGTCAAAACCACTCCGCTTCCAAAAGCC  200

seq1  AATCATAAGTTACCTTGGAAAACAAATAGGGTATTTTCAGTCTCTCAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATAAGTTACCTTGGAAAACAAATAGGGTATTTTCAGTCTCTCAGTC  250

seq1  AGAGATTTGGAGAAGAGCTACCACAAGAATCTGCAACATGTTTAGCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTTGGAGAAGAGCTACCACAAGAATCTGCAACATGTTTAGCAGCA  300

seq1  CACCCTGAGATACTGCCTGTACCATCAACCTGTTACTTAACCAGATATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGAGATACTGCCTGTACCATCAACCTGTTACTTAACCAGATATGG  350

seq1  ATAAACTAAGTGAACTCTGGAGATGAAATTCCCAGAACCTAAGTGTTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTAAGTGAACTCTGGAGATGAAATTCCCAGAACCTAAGTGTTAAC  400

seq1  AGAGTATCTAAAATGTAGCAGCCTTTATTCTGAGCTGAGTTGAAGGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATCTAAAATGTAGCAGCCTTTATTCTGAGCTGAGTTGAAGGCAGA  450

seq1  TGAAATATTAACAGCAAGTTCTAGCAGCAGAAAATGAAATATGAGATCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATTAACAGCAAGTTCTAGCAGCAGAAAATGAAATATGAGATCCT  500

seq1  GTATCAGAAATTATTAGTAACCTGTTAAAAGAAATGCTGAAAAATGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAGAAATTATTAGTAACCTGTTAAAAGAAATGCTGAAAAATGGCAG  550

seq1  TTACCAAATTAAAACTGGGAAACAGAGCCCAAATGGGAAATTTCAAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAAATTAAAACTGGGAAACAGAGCCCAAATGGGAAATTTCAAAAAG  600

seq1  TTTGGAGGAAAATAAATGACAGATTGTCCTCTTGGCTCTTATTACTATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGGAAAATAAATGACAGATTGTCCTCTTGGCTCTTATTACTATGC  650

seq1  CATCCTAAATCCTACTTGGCAATGGATGGTGGAGGTGAAATAAGAGCGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTAAATCCTACTTGGCAATGGATGGTGGAGGTGAAATAAGAGCGGC  700

seq1  ATCCCTGCCAGCGTTGGTCCTCAGATTTGTAGTCCTAAGTGTCTGTGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGCCAGCGTTGGTCCTCAGATTTGTAGTCCTAAGTGTCTGTGATG  750

seq1  GTGTCTGGGGCTGACTGGAAACGTAGTTGGGAGTTGATAGCATTTGAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGGGGCTGACTGGAAACGTAGTTGGGAGTTGATAGCATTTGAGCT  800

seq1  TTATCTAAATTGAAGAGCCTGGAGACTCTTATTATGAAAGGCTTCCTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTAAATTGAAGAGCCTGGAGACTCTTATTATGAAAGGCTTCCTCTC  850

seq1  ATTTGTGAATTGGCCCCTTTGCTCCACTTTGGATGGCTGGCTTCCTCCAT  900
      | ||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  A-TTGTGAATTGG-CCCTTTGCTCCACTTTGGATGGCTGGCTTCCTCCAT  898

seq1  GCAGAGCTATACTAAATGTTCTACATGGGAAAGCTATTCTCCTTAAATGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCTATACTAAATGTTCTACATGGGAAAGCTATTCTCCTTAAATGC  948

seq1  CTTCAAATTTAAAGCATCTATCTGAATATGTTCATGTTTATGACTCAAAA  1000
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTTCAAATTTAAAGCATCTATCTG-ATATGTTCATGTTTATGACTCAAAA  997

seq1  TATCTAACATCAAAAAGAAAGAGGGGGTACAAATAGAAAATGCCCAGCAG  1050
      | ||| |||||||||   |||||||||||||||||| ||||| |||||||
seq2  TTTCT-ACATCAAAA--GAAGAGGGGGTACAAATAG-AAATG-CCAGCAG  1042

seq1  TAAATGAAGGAGATATTTTTCCTTCAGTAACTGAAAAAGAAAAATTA-TT  1099
      |||||| ||||||||||||||| || || ||||||||| |||||||| ||
seq2  TAAATG-AGGAGATATTTTTCC-TCCGT-ACTGAAAAA-AAAAATTATTT  1088

seq1  TTATGCAGAGTTGTTGAGCATTTGATGCCAGAGGGGAGAAAAAGG  1144
      |||||| ||||  |||||| ||||||||   ||||||||||||||
seq2  TTATGCTGAGTGTTTGAGC-TTTGATGC--TAGGGGAGAAAAAGG  1130