BAC Information

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BAC

Clone NameB6Ng01-068H15
Chromosome16 (Build37)
Map Location 24,934,192 - 25,033,039
singlet/doubletdoublet
Overlap geneLpp
Upstream geneBcl6, EG433009, LOC666580, LOC100043564, 1110054M08Rik, A730098P11Rik
Downstream gene5430420C16Rik, Trp63, LOC100043571, Leprel1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068H15.bB6Ng01-068H15.g
ACCDH887053DH887054
length1,183818
definitionDH887053|Mus musculus domesticus DNA, BAC clone: B6Ng01-068H15, 5' end.DH887054|Mus musculus domesticus DNA, BAC clone: B6Ng01-068H15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,934,192 - 24,935,391)(25,032,224 - 25,033,039)
sequence
gaattcaacagataaaaggccagaggagacatttgaaaagtccatgttgt
tattattttaggtcagatatttacaaattgtactttaaaagttatgactg
caaaaacaaagagtgcgtatctttctgtcttgtttgggcaaggctgtgtg
ctggctagtaagaggaggagccggtgtgctcacactcccagtgtgaacta
ttacactattgttcacatttgcttttcctcactaatgtgcccacccacct
tagcagatccccagctcaatttcctggaattgtcctatcagaaagtcctg
acttcaggactggatccatgtgtgctgcgtgtgtgctaccattgagttga
agactagtttttattttcagtattcttgaaggtttatcatcattgtcatc
actattattgctactactgctactattactattattactatcatcatcat
cattattattggtaagtttaactttccgtggagtgaacctagaccactaa
gctgaactcactctaaatgtttcagagaattaaaatacaacacttctcta
taaatttttaagaaaaatctaagtttctgtttaaaaacaatcaaaaagtg
aatgcagtgtctttacaggttgtgatgcattcaggagtagttacgagaca
agtagagtgattgcattaccttccatgaagctcttggggaaaaattgtct
atgtgcatgagtgttgtgtctgtgcatgtgtctatacaccacctgagtgc
tttgtgggacatagagtctagaagagggggttagattcacaggactggag
ttacagacagttgtgagcctccatgtgggatgctgggatttgaacctgag
tcctctagtgtgcttttaacccctgacccttctctccagccttctttctg
tgtagctcttactatatttcactgcacaatattgtttccacgctgctaga
ctttagttctgagcttcttgaacatgctctgagttcaggccatttccatc
ttcctggccagcacgatgatgctccgtctagatttggcattttcagagct
gacgcaaaggcactatgtcagcctgttagacagttttcttcaaagcttct
ggggatctgacactacaacatatggtttcagggtttcattggattttcat
atttttcagaattcattctggactgcattcaag
gaattccagttcttaggactgagatcagcttgacaaggggactcagacta
cctcccaaaccccaacatgacatttcctcatggagattaagggaacaatg
gagggtgctatcttcatagaaaccccaagtgatgccctcttgtgtgcttg
tgatcagagacagagacagccttatgtggggctgaggcttctcaacagag
ggacagaacagtcaagaagacagagcactactccccaacccacccactcc
cacttcctggccctggcattcccctatacaggggcatagaaccttcacaa
gaccaaggacctgttctcccactgatgaccgactaggccatcctctgttt
gaaatgtaaataaagaaaatatctaataagaaagaaagaaagaaagaaag
aaagaaaggaagaaagaaagaaagaaagaaagaaagaaagaaagaagagg
cacaacaaacaattcaaaattagcttggctacataaaaccgaacaaggca
gctaagtgaataatgatgcttgtttccaaaaaaaaaaaaaaaaaaaaaaa
aaagacagagcactgtagaagctggacacctttctcccatgaagatgcat
gcaaactctaatagttccctgtctccaccactgactgctggtccttccac
ttagattttgttagctaagtgacaaaggagatatttactaaaatgttaat
agaatatatatgttaatatatattctattaatataatatattatattatc
ttgatataatatatcagtgtatatatacatattacatatacatatacata
tacatatacatgtacata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_24934192_24935391
seq2: B6Ng01-068H15.b_40_1222

seq1  GAATTCAACAGATAAAAGGCCAGAGGAGACA-CAGAAAAGTCCATGTTGT  49
      |||||||||||||||||||||||||||||||   ||||||||||||||||
seq2  GAATTCAACAGATAAAAGGCCAGAGGAGACATTTGAAAAGTCCATGTTGT  50

seq1  TATTATTTTAGGTCAGATATTTACAAATTGTACTTTAAAAGTTATGACTG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTTAGGTCAGATATTTACAAATTGTACTTTAAAAGTTATGACTG  100

seq1  CAAAAACAAAGAGTGCGTATCTTTCTGTCTTGTTTGGGCAAGGCTGTGTG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAAAGAGTGCGTATCTTTCTGTCTTGTTTGGGCAAGGCTGTGTG  150

seq1  CTGGCTAGTAAGAGGAGGAGCCGGTGTGCTCACACTCCCAGTGTGAACTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTAGTAAGAGGAGGAGCCGGTGTGCTCACACTCCCAGTGTGAACTA  200

seq1  TTACACTATTGTTCACATTTGCTTTTCCTCACTAATGTGCCCACCCACCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTATTGTTCACATTTGCTTTTCCTCACTAATGTGCCCACCCACCT  250

seq1  TAGCAGATCCCCAGCTCAATTTCCTGGAATTGTCCTATCAGAAAGTCCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGATCCCCAGCTCAATTTCCTGGAATTGTCCTATCAGAAAGTCCTG  300

seq1  ACTTCAGGACTGGATCCATGTGTGCTGCGTGTGTGCTACCATTGAGTTGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGGACTGGATCCATGTGTGCTGCGTGTGTGCTACCATTGAGTTGA  350

seq1  AGACTAGTTTTTATTTTCAGTATTCTTGAAGGTTTATCATCATTGTCATC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAGTTTTTATTTTCAGTATTCTTGAAGGTTTATCATCATTGTCATC  400

seq1  ACTATTATTGCTACTACTGCTACTATTACTATTATTACTATCATCATCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTATTGCTACTACTGCTACTATTACTATTATTACTATCATCATCAT  450

seq1  CATTATTATTGGTAAGTTTAACTTTCCGTGGAGTGAACCTAGACCACTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTATTGGTAAGTTTAACTTTCCGTGGAGTGAACCTAGACCACTAA  500

seq1  GCTGAACTCACTCTAAATGTTTCAGAGAATTAAAATACAACACTTCTCTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAACTCACTCTAAATGTTTCAGAGAATTAAAATACAACACTTCTCTA  550

seq1  TAAATTTTTAAGAAAAATCTAAGTTTCTGTTTAAAAACAATCAAAAAGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTTAAGAAAAATCTAAGTTTCTGTTTAAAAACAATCAAAAAGTG  600

seq1  AATGCAGTGTCTTTACAGGTTGTGATGCATTCAGGAGTAGTTACGAGACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGTGTCTTTACAGGTTGTGATGCATTCAGGAGTAGTTACGAGACA  650

seq1  AGTAGAGTGATTGCATTACCTTCCATGAAGCTCTTGGGGAAAAATTGTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGTGATTGCATTACCTTCCATGAAGCTCTTGGGGAAAAATTGTCT  700

seq1  ATGTGCATGAGTGTTGTGTCTGTGCATGTGTCTATACACCACCTGAGTGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCATGAGTGTTGTGTCTGTGCATGTGTCTATACACCACCTGAGTGC  750

seq1  TTTGT-GGACATAGAGTCTAGAAGAGGGGGTTAGATTCACAGGACTGGAG  798
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGGACATAGAGTCTAGAAGAGGGGGTTAGATTCACAGGACTGGAG  800

seq1  TTACAGACAGTTGTGAGCCTCCATGT-GGATGCTGGGATTTGAACCTGAG  847
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTACAGACAGTTGTGAGCCTCCATGTGGGATGCTGGGATTTGAACCTGAG  850

seq1  TCCTCTAGTGTGCTTTTAACCCCTGACCCTTCTCTCCAGCCTTCTTTCTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTAGTGTGCTTTTAACCCCTGACCCTTCTCTCCAGCCTTCTTTCTG  900

seq1  TGTAGCTCTTACTAATATTTCCACTGCACCAATATTGTTTCCCACGCTGC  947
      ||||||||||||| |||||| ||||||| ||||||||||| |||||||||
seq2  TGTAGCTCTTACT-ATATTT-CACTGCA-CAATATTGTTT-CCACGCTGC  946

seq1  TAGACTTTAGTTCTGAGCTTCTTGAACATGCTCTGAGTTCCAGGCCATTT  997
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAGACTTTAGTTCTGAGCTTCTTGAACATGCTCTGAGTT-CAGGCCATTT  995

seq1  CCATCCTCCTGGCCAGCACGATGATGCTCACGTCTAGATTTGGCCATTTT  1047
      ||||| ||||||||||||||||||||||| ||||||||||||| ||||||
seq2  CCATCTTCCTGGCCAGCACGATGATGCTC-CGTCTAGATTTGG-CATTTT  1043

seq1  CAGAGCTGACGCACAGGCACTATGTCAAGCCTGTTAGGACAGTTTTCTCT  1097
      ||||||||||||| |||||||||||| ||||||||| |||||||||||  
seq2  CAGAGCTGACGCAAAGGCACTATGTC-AGCCTGTTA-GACAGTTTTCTTC  1091

seq1  AAAGCTCTCTGGGTGATCCTGACACTACAACATAGTGTTTCCAGTGGTTT  1147
      |||||| |||||| ||| |||||||||||||||| || || ||| |||||
seq2  AAAGCT-TCTGGG-GAT-CTGACACTACAACATA-TGGTTTCAG-GGTTT  1136

seq1  CCATTGTGATTTTCATATTTTTACAGACATTCAATTCTGGACTGCATTTC  1197
       ||||| ||||||||||||||| |||| |||| ||||||||||||| |||
seq2  -CATTG-GATTTTCATATTTTT-CAGA-ATTC-ATTCTGGACTGCA-TTC  1180

seq1  AAG  1200
      |||
seq2  AAG  1183

seq1: chr16_25032224_25033039
seq2: B6Ng01-068H15.g_71_888 (reverse)

seq1  TATGTATATGTATATGTATATGTATATGTATATGT-ATATGTATATATAC  49
      |||||| |||||||||||||||||||||||||||| ||||||||||||||
seq2  TATGTACATGTATATGTATATGTATATGTATATGTAATATGTATATATAC  50

seq1  ACTGATATATTATATC-AGATAATATAATATATTATATTAATAGAATATA  98
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACTGATATATTATATCAAGATAATATAATATATTATATTAATAGAATATA  100

seq1  TATTAACATATATATTCTATTAACATTTTAGTAAATATCTCCTTTGTCAC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACATATATATTCTATTAACATTTTAGTAAATATCTCCTTTGTCAC  150

seq1  TTAGCTAACAAAATCTAAGTGGAAGGACCAGCAGTCAGTGGTGGAGACAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTAACAAAATCTAAGTGGAAGGACCAGCAGTCAGTGGTGGAGACAG  200

seq1  GGAACTATTAGAGTTTGCATGCATCTTCATGGGAGAAAGGTGTCCAGCTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTATTAGAGTTTGCATGCATCTTCATGGGAGAAAGGTGTCCAGCTT  250

seq1  CTACAGTGCTCTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTGGAAACAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTGCTCTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTGGAAACAAG  300

seq1  CATCATTATTCACTTAGCTGCCTTGTTCGGTTTTATGTAGCCAAGCTAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTATTCACTTAGCTGCCTTGTTCGGTTTTATGTAGCCAAGCTAAT  350

seq1  TTTGAATTGTTTGTTGTGCCTCTTCTTTCTTTCTTTCTTTCTTTCTTTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATTGTTTGTTGTGCCTCTTCTTTCTTTCTTTCTTTCTTTCTTTCT  400

seq1  TTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTATTAGATAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTATTAGATAT  450

seq1  TTTCTTTATTTACATTTCAAACAGAGGATGGCCTAGTCGGTCATCAGTGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATTTACATTTCAAACAGAGGATGGCCTAGTCGGTCATCAGTGG  500

seq1  GAGAACAGGTCCTTGGTCTTGTGAAGGTTCTATGCCCCTGTATAGGGGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAGGTCCTTGGTCTTGTGAAGGTTCTATGCCCCTGTATAGGGGAA  550

seq1  TGCCAGGGCCAGGAAGTGGGAGTGGGTGGGTTGGGGAGTAGTGCTCTGTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGGCCAGGAAGTGGGAGTGGGTGGGTTGGGGAGTAGTGCTCTGTC  600

seq1  TTCTTGACTGTTCTGTCCCTCTGTTGAGAAGCCTCAGCCCCACATAAGGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGACTGTTCTGTCCCTCTGTTGAGAAGCCTCAGCCCCACATAAGGC  650

seq1  TGTCTCTGTCTCTGATCACAAGCACACAAGAGGGCATCACTTGGGGTTTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTGTCTCTGATCACAAGCACACAAGAGGGCATCACTTGGGGTTTC  700

seq1  TATGAAGATAGCACCCTCCATTGTTCCCTTAATCTCCATGAGGAAATGTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGATAGCACCCTCCATTGTTCCCTTAATCTCCATGAGGAAATGTC  750

seq1  ATGTTGGGGTTTGGGAGGTAGTCTGAGTCCCCTTGTCAAGCTGATCTCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGGGTTTGGGAGGTAGTCTGAGTCCCCTTGTCAAGCTGATCTCAG  800

seq1  TCCTAAGAACTGGAATTC  816
      ||||||||||||||||||
seq2  TCCTAAGAACTGGAATTC  818