BAC Information

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BAC

Clone NameB6Ng01-068J16
Chromosome16 (Build37)
Map Location 84,221,057 - 84,369,477
singlet/doubletdoublet
Overlap geneEG621729, LOC640489
Upstream geneEG545172, LOC100039572
Downstream geneLOC665664, LOC547311, LOC100039893, LOC100039634, Mrpl39, Jam2, Atp5j, LOC100039950, Gabpa, Gm311, App
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068J16.bB6Ng01-068J16.g
ACCDH887143DH887144
length803434
definitionDH887143|Mus musculus domesticus DNA, BAC clone: B6Ng01-068J16, 5' end.DH887144|Mus musculus domesticus DNA, BAC clone: B6Ng01-068J16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,221,057 - 84,221,848)(84,369,038 - 84,369,477)
sequence
gaattccataacctctctcgaatgacttgttaaaatgtgatagtatttta
cttaaattttatgagaatggccaggtttacaacacaatgaaggtgtgatt
ttagataatgtgattgaatagtttgaactaaaattaagatgaagattata
gtagatcaattatagatagatagatagatagatagatagatagatagata
gatagatagatagatagatagatagatgtatagatatagatgtagatatg
ggtatccatatatgaagtgcctactaaaatcatcagatgtttattaaggt
taagactttcccccactatctttttctttagtttctaattctcttgaact
tcctttgtctctcacactgcagcattgtctgaaaaatgttggatatcaat
tcacatttaatgagaatgctagtgtagttcacactgcagaagcttgtcat
attaggcgggactctttagagggccaaaccaaaatagtgaatatatgtaa
taatgaatatatgaataatgaataatgaaaacaatgaatattacaaaggg
tatgaatcgtattagcttacaggatgtgcactgtgtaaagatatgaaata
tatttcatgaatatatgaaataaatgaatgtgtgaataatgaataatgaa
agtaatgaatattacaaagaatataaatcatatttattttacagggtgtg
cactggggcaatcccaaaaatggctatctgtacactgaagagagtgagat
cccagcagttgttaagaccacataccacacacacacacacacacgcacac
act
tagaggacaaggaaaactttttttaaaaatgtatttatatctaccacaga
ctggtgctttagtaagcaaagactacaatgcacctgtgggcggcatatat
caatttatgccatgcctgtgatagttggtgattctgaaagagaggagaca
acttagaaataagcatatggttgcttaattctcccttagcagtttcattt
aaaccaaggctgaaatgctgaaaagagtctaagattcttataagaagtat
agaatttttttttttaggagtattgcagtaatcagaggattaaggaatag
tacaaagatgacatcaggcaacagacctcatgtaggagatttattgcggt
ggggatgggaggcaggggaaggggacacaaatggctgcctctgagtgagg
aagagagagagatctggaggggggtagagagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_84221057_84221848
seq2: B6Ng01-068J16.b_47_848

seq1  GAATTCCATAACCTCTCTCGAATGACTTGTTAAAATGTGATAGTATTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAACCTCTCTCGAATGACTTGTTAAAATGTGATAGTATTTTA  50

seq1  CTTAAATTTTATGAGAATGGCCAGGTTTACAACACAATGAAGGTGTGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATTTTATGAGAATGGCCAGGTTTACAACACAATGAAGGTGTGATT  100

seq1  TTAGATAATGTGATTGAATAGTTTGAACTAAAATTAAGATGAAGATTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAATGTGATTGAATAGTTTGAACTAAAATTAAGATGAAGATTATA  150

seq1  GTAGATCAATT--------ATAGATAGATAGATAGATAGATAGATAGATA  192
      |||||||||||        |||||||||||||||||||||||||||||||
seq2  GTAGATCAATTATAGATAGATAGATAGATAGATAGATAGATAGATAGATA  200

seq1  GATAGATAGATAGATAGATAGATAGATGTATAGATATAGATGTAGATATG  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATAGATAGATAGATAGATAGATGTATAGATATAGATGTAGATATG  250

seq1  GGTATCCATATATGAAGTGCCTACTAAAATCATCAGATGTTTATTAAGGT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCCATATATGAAGTGCCTACTAAAATCATCAGATGTTTATTAAGGT  300

seq1  TAAGACTTTCCCCCACTATCTTTTTCTTTAGTTTCTAATTCTCTTGAACT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTTTCCCCCACTATCTTTTTCTTTAGTTTCTAATTCTCTTGAACT  350

seq1  TCCTTTGTCTCTCACACTGCAGCATTGTCTGAAAAATGTTGGATATCAAT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGTCTCTCACACTGCAGCATTGTCTGAAAAATGTTGGATATCAAT  400

seq1  TCACATTTAATGAGAATGCTAGTGTAGTTCACACTGCAGAAGCTTGTCAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTAATGAGAATGCTAGTGTAGTTCACACTGCAGAAGCTTGTCAT  450

seq1  ATTAGGCGGGACTCTTTAGAGGGCCAAACCAAAATAGTGAATATATGTAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGCGGGACTCTTTAGAGGGCCAAACCAAAATAGTGAATATATGTAA  500

seq1  TAATGAATATATGAATAATGAATAATGAAAACAATGAATATTACAAAGGG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAATATATGAATAATGAATAATGAAAACAATGAATATTACAAAGGG  550

seq1  TATGAATCGTATTAGCTTACAGGATGTGCACTGTGTAAAGATATGAAATA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATCGTATTAGCTTACAGGATGTGCACTGTGTAAAGATATGAAATA  600

seq1  TATTTCATGAATATATGAAAT-AATGAATGTGTGAATAATGAATAATGAA  641
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TATTTCATGAATATATGAAATAAATGAATGTGTGAATAATGAATAATGAA  650

seq1  AGTAATGAATATTACAAAGAATATAAATCATA-TTATTTTACAGGGTGTG  690
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGTAATGAATATTACAAAGAATATAAATCATATTTATTTTACAGGGTGTG  700

seq1  CACTGGGGCAAT-CCAAAAATGGCTATCTGTACACTGAAGAGAGTGAGAT  739
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CACTGGGGCAATCCCAAAAATGGCTATCTGTACACTGAAGAGAGTGAGAT  750

seq1  CCCAGCAGTTGTTAAGACCACATACACACACACACACACACACACACACA  789
      ||||||||||||||||||||||||| ||||||||||||||||||| ||||
seq2  CCCAGCAGTTGTTAAGACCACATAC-CACACACACACACACACACGCACA  799

seq1  CAC  792
      |||
seq2  CAC  802

seq1: chr16_84369038_84369477
seq2: B6Ng01-068J16.g_69_508 (reverse)

seq1  CCTCTCTCTACCCCCCTCCAGATCTCTCTCTCTTCCTCACTCAGAGGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTCTACCCCCCTCCAGATCTCTCTCTCTTCCTCACTCAGAGGCAG  50

seq1  CCATTTGTGTCCCCTTCCCCTGCCTCCCATCCCCACCGCAATAAATCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGTGTCCCCTTCCCCTGCCTCCCATCCCCACCGCAATAAATCTCC  100

seq1  TACATGAGGTCTGTTGCCTGATGTCATCTTTGTACTATTCCTTAATCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAGGTCTGTTGCCTGATGTCATCTTTGTACTATTCCTTAATCCTC  150

seq1  TGATTACTGCAATACTCCTAAAAAAAAAAATTCTATACTTCTTATAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACTGCAATACTCCTAAAAAAAAAAATTCTATACTTCTTATAAGAA  200

seq1  TCTTAGACTCTTTTCAGCATTTCAGCCTTGGTTTAAATGAAACTGCTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGACTCTTTTCAGCATTTCAGCCTTGGTTTAAATGAAACTGCTAAG  250

seq1  GGAGAATTAAGCAACCATATGCTTATTTCTAAGTTGTCTCCTCTCTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATTAAGCAACCATATGCTTATTTCTAAGTTGTCTCCTCTCTTTCA  300

seq1  GAATCACCAACTATCACAGGCATGGCATAAATTGATATATGCCGCCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACCAACTATCACAGGCATGGCATAAATTGATATATGCCGCCCACA  350

seq1  GGTGCATTGTAGTCTTTGCTTACTAAAGCACCAGTCTGTGGTAGATATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCATTGTAGTCTTTGCTTACTAAAGCACCAGTCTGTGGTAGATATAA  400

seq1  ATACATTTTTAAAAAAAGTTTTCCTTGTCCTCTAGAATTC  440
      ||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTTTAAAAAAAGTTTTCCTTGTCCTCTAGAATTC  440