BAC Information

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BAC

Clone NameB6Ng01-069B05
Chromosome10 (Build37)16 (Build37)
Map Location 123,639,411 - 123,639,60915,301,688 - 15,302,716
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAI851790
Downstream gene4930503E24Rik, LOC671416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069B05.bB6Ng01-069B05.g
ACCDH887486DH887487
length5461,032
definitionDH887486|Mus musculus domesticus DNA, BAC clone: B6Ng01-069B05, 5' end.DH887487|Mus musculus domesticus DNA, BAC clone: B6Ng01-069B05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(123,639,411 - 123,639,609)(15,301,688 - 15,302,716)
sequence
gaattctccacattctatgacttgtatacataatatctttaggaacaaga
ttttactgtcaagttctggagggtaaccaaaagcagtggcaataccttgt
aaggtttgaaaggaggaaccctgtaacctcattgattcaagaaaaggtaa
ctcacacccagcactggtctttttatttcatagcgcatagtgtctgcaaa
aactattctctccctactatagggtgattccatttaatatccttttttac
aagtatatgtaagcatgtttaaaagcttctatactagctgtcctccatat
ggcattttttcaaaggtctctagtgtactatctctctccatactcactcc
tgtgtcctgcactgctatcctccaccccgtttaatccttgttatttcatt
gttctttttcaccctaatttatcttttatttttagttatgtgtatgtgtg
tctgtgtaacttagaagagacattggatcacctggagctggagatatata
tatatatatatatatatatatatatatatatatatatatatatatc
gaattcttatgtttgcctttcactgtctggtaatctttgaagctagttgt
tatagttgtctctggttagagcttgttcctcaggtgactctgttagcctc
tatcagcagacctgggagactagatctctccttagtttcagtggtcagag
tattctctgcaggcaagctctcttcttgcagggaaggtgcccagatatat
ggtgttcgaaactgcctcctggcagaagttgtgttccactcaccagaggt
cttaagatcccgtggagggtcctgtgagggccttgggggtgtcgggaaac
tctgcatgcaaggtaccccggagctggagtagaccggaagggacttgtgc
ccctgatcaggccaggttatctgcttccctagttaatggagtctcaggtc
cagcgtgattggattggagcagatgctgtgttccactcaccagaggtctt
aggatcccgtgggggatcctgtgtgggtccttgcctgtgtccggagactc
tgcgggcctagttcttccattttcatgtcctgcagagtacctggtctcct
gcccacacttacagtttaagggctccttcaccacaccatcagattttctt
tcttgtacccattcaaaccacagtcctctgagaaaagtcattcccattgt
gggggacatgttatttccattgtgagggacagctatcttgtgccatccac
ctcacaaaataaaaaggaaaagaaaatcatatataaatggcatgagaaga
aatgtgcagtttatttttgtttgtttggcttttagtttgtttgacttttt
ttgtttctgtttttggtgttgtattttgacataagagcttaccaagtagc
ctaggccacctgcaaacccatattagccaaacttgcttggctctaggaag
cataaatttctgtagtggctttagtgctatcgttttatgaaagtttttat
ctagtcaggcatgatggtgcacagtgtagtcctagcattggaagacgaga
ctagcgacgtcagatgtgaagcagccactgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123639411_123639609
seq2: B6Ng01-069B05.b_533_594 (reverse)

seq1  GATATATATATATATATATTTCTGCTTTCCAAATATGAGCTGAGTAAAAA  50
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGAGTTCTCTCTTTGGAAGGATAATACCCCAGCAGGCACCTGATGGTG  100
                                                        
seq2  --------------------------------------------------  0

seq1  CTTCTAGGCTTTGAAGAAATTATATAGGTCTTTTGTGCATACTTTATATA  150
                                            ||| | ||||||
seq2  -------------------------------------GATA-TATATATA  12

seq1  TATATATATATATATATATATATATATATATATATATATATC-CCAGCTC  199
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TATATATATATATATATATATATATATATATATATATATATCTCCAGCTC  62

seq1: chr16_15301688_15302716
seq2: B6Ng01-069B05.g_78_1099 (reverse)

seq1  ATCAGTGGCTGGCTTCACATTCTGCGTTCGCTTGTCTCTGTCTTCCAAAT  50
      |||||||||| |||||||| ||||   ||||| ||||| ||||||| |||
seq2  ATCAGTGGCT-GCTTCACA-TCTGACGTCGCTAGTCTC-GTCTTCC-AAT  46

seq1  GCTAGGACTACAACTGTGCACCATCATGCCTGACTAGATTAAAAACTTTC  100
      ||||||||||| |||||||||||||||||||||||||| |||||||||||
seq2  GCTAGGACTAC-ACTGTGCACCATCATGCCTGACTAGA-TAAAAACTTTC  94

seq1  ATAAAACGATAGCACTAAGGCCACTACAGAAATTTTATGCTTCCTAGAGC  150
      |||||||||||||||||| ||||||||||||| |||||||||||||||||
seq2  ATAAAACGATAGCACTAAAGCCACTACAGAAA-TTTATGCTTCCTAGAGC  143

seq1  CAAGCAAGTTTGGCTAATATGGGTTTGCAGGTGGCCTAGGCTACTTGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAGTTTGGCTAATATGGGTTTGCAGGTGGCCTAGGCTACTTGGTA  193

seq1  AGCTCTTATGTCAAATTACAACACCAAAAACAGAAACAAAAAAAGTCAAA  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGCTCTTATGTCAAAATACAACACCAAAAACAGAAACAAAAAAAGTCAAA  243

seq1  CAAACTAAAAGCCAAACAAACAAAAATAAACTGCACATTTCTTCTCATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTAAAAGCCAAACAAACAAAAATAAACTGCACATTTCTTCTCATGC  293

seq1  CATTTATATATGATTTTCTTTTCCTTTTTATTTTGTGAGGTGGATGGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATATATGATTTTCTTTTCCTTTTTATTTTGTGAGGTGGATGGCAC  343

seq1  AAGATAGCTGTCCCTCACAATGGAAATAACATGTCCCCCACAATGGGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGCTGTCCCTCACAATGGAAATAACATGTCCCCCACAATGGGAAT  393

seq1  GACTTTTCTCAGAGGACTGTGGTTTGAATGGGTACAAGAAAGAAAATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTCTCAGAGGACTGTGGTTTGAATGGGTACAAGAAAGAAAATCTG  443

seq1  ATGGTGTGGTGAAGGAGCCCTTAAACTGTAAGTGTGGGCAGGAGACCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTGGTGAAGGAGCCCTTAAACTGTAAGTGTGGGCAGGAGACCAGG  493

seq1  TACTCTGCAGGACATGAAAATGGAAGAACTAGGCCCGCAGAGTCTCCGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGCAGGACATGAAAATGGAAGAACTAGGCCCGCAGAGTCTCCGGA  543

seq1  CACAGGCAAGGACCCACACAGGATCCCCCACGGGATCCTAAGACCTCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCAAGGACCCACACAGGATCCCCCACGGGATCCTAAGACCTCTGG  593

seq1  TGAGTGGAACACAGCATCTGCTCCAATCCAATCACGCTGGACCTGAGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGAACACAGCATCTGCTCCAATCCAATCACGCTGGACCTGAGACT  643

seq1  CCATTAACTAGGGAAGCAGATAACCTGGCCTGATCAGGGGCACAAGTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAACTAGGGAAGCAGATAACCTGGCCTGATCAGGGGCACAAGTCCC  693

seq1  TTCCGGTCTACTCCAGCTCCGGGGTACCTTGCATGCAGAGTTTCCCGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGGTCTACTCCAGCTCCGGGGTACCTTGCATGCAGAGTTTCCCGACA  743

seq1  CCCCCAAGGCCCTCACAGGACCCTCCACGGGATCTTAAGACCTCTGGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAGGCCCTCACAGGACCCTCCACGGGATCTTAAGACCTCTGGTGA  793

seq1  GTGGAACACAACTTCTGCCAGGAGGCAGTTTCGAACACCATATATCTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAACACAACTTCTGCCAGGAGGCAGTTTCGAACACCATATATCTGGG  843

seq1  CACCTTCCCTGCAAGAAGAGAGCTTGCCTGCAGAGAATACTCTGACCACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCCCTGCAAGAAGAGAGCTTGCCTGCAGAGAATACTCTGACCACT  893

seq1  GAAACTAAGGAGAGATCTAGTCTCCCAGGTCTGCTGATAGAGGCTAACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAAGGAGAGATCTAGTCTCCCAGGTCTGCTGATAGAGGCTAACAG  943

seq1  AGTCACCTGAGGAACAAGCTCTAACCAGAGACAACTATAACAACTAGCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCTGAGGAACAAGCTCTAACCAGAGACAACTATAACAACTAGCTT  993

seq1  CAAAGATTACCAGACAGTGAAAGGCAAAC  1029
      |||||||||||||||||||||||||||||
seq2  CAAAGATTACCAGACAGTGAAAGGCAAAC  1022