BAC Information

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BAC

Clone NameB6Ng01-070B17
Chromosome16 (Build37)
Map Location 61,419,874 - 61,421,028
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha6, EG668168, LOC668170, LOC100043524, LOC668183
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070B17.bB6Ng01-070B17.g
ACCDH888211DH888212
length1,1721,151
definitionDH888211|Mus musculus domesticus DNA, BAC clone: B6Ng01-070B17, 5' end.DH888212|Mus musculus domesticus DNA, BAC clone: B6Ng01-070B17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatatggaatggcagagaagtacctgaaaaaaat
gttcaacatccttacttatcagggaaatggaaatcaaaacaaccctgaga
tttcacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgtggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtaaaactactctggaaatcagtctggcggttcctc
agacaattggacatagtactactggaggatcccacaatacctctcctggg
catatatccagaagaggtcccaaccggtaagaaggacacatgctccacta
ttttcatagcagccttatttataatagccagaagctggaaataacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctatttaaaaagaatgaatttatgaaattcctaggc
aaatggatggagctggagggcatcatcctgagtgaggtaacccaatcaca
aaggaatttacacaatatgtactcactgataagtgaatattagcccagaa
acttagaatacccaagatataagatacaatttgctaaacgtgtgaaactc
aagaagaaccaagaccaaagtgtggacactttgcctcttcttagaattgg
gaacaaaacacccatggtaggagttacagagacaaagtttggagctgtga
cgaaaggatggaccatctagagactgccatatccagggatccatcccata
atcagcttcctaacgctgacaccaatgcacacactagcaagattctgctg
aaaggacccagatatagttgtctcttgtgagactatgccggggcctagca
aacacagaagtggatgatcacagtcatctatggatggatcacaggtccac
aatggaggagctaggagaagtacccaagcgctaaaggatctgcaatctta
taaggtggacacatatgactaccagtacccctgagcttttacctcttgct
gcatatttatcaaaatgggcctagtcagccatcactggaaaggaggcttt
ggacttgcacctttaataccccagtaggaatgccaggccaaagatgggga
tggtgggaccgggatgtgggtg
gaattcaaggaatgcaatttagaaaatataattaagtgtgaaatctagag
aggattctagttaagccagagttgaggggaaccacttaaaatttttagtt
gtaattcaataatcaggaagatctcacctagatgactggcttaaactaaa
ctgggcatgttacatacatactggacattgtatacatacaattataagag
ggaatgctatgatactggtagcaaaaatgcaatattctctacactgctag
gtttcagaaaacacagaactacactgcattgtatttggcagagttgaggt
aatataagaaatggcaggagacccaataagactgatattcagtcttaagc
atattcagtactacaggtggcatgttgaatactggaaatcactttgatgt
aatggacatagactgatagtttatagaacctgggtattagttgctccata
attgtctttttttctgcatataaaatcacttggtaagtcactgatattgt
attgtagaatacaatattaaaggtttgattctgatttatggcttaatgct
gcaacgattttgttcttgattaattatagaagtgaatgattatattgtgg
tcacatttctttgaaaaggttgacatagaatataattcctgaacttacca
tataaaatagctcatcgtctcaagacaaaactatatttcattgaagtaca
gtacacatgaggttgatgcaacaaaattgtatgttatatctcagagagta
gcaggaggtacttctatttcttttttttttttttttcatttctatgaaga
gggattgactgggcatacttttattctttttaatgatacatactgacttg
aagtgtcttgtgtaactgctgtttgaatgactttaacaaggtacatggag
aactcgcagaaggactgtgtcccttaaatccaattccttctgacttagaa
agggtcaatatcattctgacttttccccaatacaaaataacactctctca
acttgtgccctcagtcatgatccctcccttacaatgatggatcttcccta
tcttttgctatccctggcagccagttcttaacagaatggactcaaatcac
tccttgtgaaggtcttcctaaataacctacctgtcgatcattgaactaga
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61419874_61421028
seq2: B6Ng01-070B17.g_67_1217 (reverse)

seq1  ATCTAGTTACAATGATCCGACAGGTA-GTTATTTAGGAAGACCTTCCACA  49
      |||||||| ||||||| ||||||||| |||||||||||||||||| ||||
seq2  ATCTAGTT-CAATGAT-CGACAGGTAGGTTATTTAGGAAGACCTT-CACA  47

seq1  GGGAGTGATTTGAGTCCCATCTGTTTAAGAACTGGCTGCCAGTGATAGCA  99
       ||||||||||||||||  |||| |||||||||||||||||| |||||||
seq2  AGGAGTGATTTGAGTCCATTCTG-TTAAGAACTGGCTGCCAGGGATAGCA  96

seq1  AAAGATAGGGAAGATCCATCATTGTAAGTGAGGGATCAATGACTGAGAGC  149
      |||||||||||||||||||||||||||| |||||||| ||||||||| ||
seq2  AAAGATAGGGAAGATCCATCATTGTAAGGGAGGGATC-ATGACTGAGGGC  145

seq1  ACAAGTTGAGAGAGTGTTATTTTGTATTGGGGAAAAGTCAGAATGATATT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTGAGAGAGTGTTATTTTGTATTGGGGAAAAGTCAGAATGATATT  195

seq1  GACCCTTTCTAAGTCAGAAGGAATTGGATTTAAGGGACACAGTTCCTTCT  249
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GACCCTTTCTAAGTCAGAAGGAATTGGATTTAAGGGACACAG-TCCTTCT  244

seq1  GCGAGTTCTCCATGTACCTTGTTAAAGTCATTCAAACAGCAGTTACACAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGTTCTCCATGTACCTTGTTAAAGTCATTCAAACAGCAGTTACACAA  294

seq1  GACACTTCAAGTCAGTATGTATCATTAAAAAGAATAAAAGTATGCCCAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTCAAGTCAGTATGTATCATTAAAAAGAATAAAAGTATGCCCAGT  344

seq1  CAATCCCTCTTCATAGAAATG-AAAAAAAAAAAAAAAGAAATAGAAGTAC  398
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAATCCCTCTTCATAGAAATGAAAAAAAAAAAAAAAAGAAATAGAAGTAC  394

seq1  CTCCTGCTACTCTCTGAGGTATAACATACAATTTTGTTGCATCAACCTCA  448
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTCCTGCTACTCTCTGAGATATAACATACAATTTTGTTGCATCAACCTCA  444

seq1  TGTGTACTGTACTTCAATGAAATATAGTTTTGTCTTGAGACGATGAGCTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACTGTACTTCAATGAAATATAGTTTTGTCTTGAGACGATGAGCTA  494

seq1  TTTTATATGGTAAGTTCAGGAATTATATTCTATGTCAACCTTTTCAAAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATGGTAAGTTCAGGAATTATATTCTATGTCAACCTTTTCAAAGA  544

seq1  AATGTGACCACAATATAATCATTCACTTCTATAATTAATCAAGAACAAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGACCACAATATAATCATTCACTTCTATAATTAATCAAGAACAAAA  594

seq1  TCGTTGCAGCATTAAGCCATAAATCAGAATCAAACCTTTAATATTGTATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTGCAGCATTAAGCCATAAATCAGAATCAAACCTTTAATATTGTATT  644

seq1  CTACAATACAATATCAGTGACTTACCAAGTGATTTTATATGCAGAAAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATACAATATCAGTGACTTACCAAGTGATTTTATATGCAGAAAAAA  694

seq1  AGACAATTATGGAGCAACTAATACCCAGGTTCTATAAACTATCAGTCTAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATTATGGAGCAACTAATACCCAGGTTCTATAAACTATCAGTCTAT  744

seq1  GTCCATTACATCAAAGTGATTTCCAGTATTCAACATGCCACCTGTAGTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTACATCAAAGTGATTTCCAGTATTCAACATGCCACCTGTAGTAC  794

seq1  TGAATATGCTTAAGACTGAATATCAGTCTTATTGGGTCTCCTGCCATTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATGCTTAAGACTGAATATCAGTCTTATTGGGTCTCCTGCCATTTC  844

seq1  TTATATTACCTCAACTCTGCCAAATACAATGCAGTGTAGTTCTGTGTTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTACCTCAACTCTGCCAAATACAATGCAGTGTAGTTCTGTGTTTT  894

seq1  CTGAAACCTAGCAGTGTAGAGAATATTGCATTTTTGCTACCAGTATCATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACCTAGCAGTGTAGAGAATATTGCATTTTTGCTACCAGTATCATA  944

seq1  GCATTCCCTCTTATAATTGTATGTATACAATGTCCAGTATGTATGTAACA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCCCTCTTATAATTGTATGTATACAATGTCCAGTATGTATGTAACA  994

seq1  TGCCCAGTTTAGTTTAAGCCAGTCATCTAGGTGAGATCTTCCTGATTATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGTTTAGTTTAAGCCAGTCATCTAGGTGAGATCTTCCTGATTATT  1044

seq1  GAATTACAACTAAAAATTTTAAGTGGTTCCCCTCAACTCTGGCTTAACTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTACAACTAAAAATTTTAAGTGGTTCCCCTCAACTCTGGCTTAACTA  1094

seq1  GAATCCTCTCTAGATTTCACACTTAATTATATTTTCTAAATTGCATTCCT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTCTCTAGATTTCACACTTAATTATATTTTCTAAATTGCATTCCT  1144

seq1  TGAATTC  1155
      |||||||
seq2  TGAATTC  1151