BAC Information

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BAC

Clone NameB6Ng01-070H11
Chromosome16 (Build37)
Map Location 86,331,910 - 86,487,228
singlet/doubletdoublet
Overlap genenone
Upstream geneCyyr1, LOC100039994, LOC622000, Adamts1, Adamts5, LOC100040025, LOC100039780
Downstream geneN6amt1, Zfp294, ORF5, LOC100040088, Usp16, Cct8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070H11.bB6Ng01-070H11.g
ACCDH888465DH888466
length1,165937
definitionDH888465|Mus musculus domesticus DNA, BAC clone: B6Ng01-070H11, 5' end.DH888466|Mus musculus domesticus DNA, BAC clone: B6Ng01-070H11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,486,050 - 86,487,228)(86,331,910 - 86,332,466)
sequence
gaattctgttcaaattcctaaatcttataagtaatcaatcaaataaacag
ttttaatttataaatatttttctttcacatatatttgaggcaatttatca
ctgaaataagaacacttgcatgaaatgaagatataaataagatactaaaa
caaaaatatacatttttttcatcataaacttctcatatgcagctgaatac
aagcagtcaacatcttactataagttggcttttcagcatcgtctgtcagg
aattcagtcgtgaggtagaccctagacccgcagcatcaacttgacctaat
aactctgagtaagaagacagtctgacattcaagaaactggaacatttttg
tttattcccaaagtggctcagatcatgtgaccatgtaaacatcttttgtg
acccactttatttgcttcactttactttttcttgccacatcaatgatgca
tactttgtgaaaacatttcagttaatgtgctagttttatgaaaactggtg
ctaataatgctgtgaataaatgctaatttgttaaccattctttcattatc
atgacaaacaactaaggaaaacaacaaagggaaagatttatttttgccac
ctggtttatgactgtgctctactggctatgatatatttggatctgtagtg
gaaccaagcatcatggtagggtgtatacagaagaataatactgtgcaaca
tgttgtatctagaaattgaaaaacacaaagggccaagatgctttgtaagg
gtacaattctaaggattcaacttcattctattaggtatcaccttccaaag
atgctaccagctttcagttgtaccatgaactagcacccagtccttgagga
taggacctttctgagaatctaagacctgagccataattgtgttacatatg
ttttaggattgaatgcattaaacaatctaaatgttgtatttatcaatacc
tttctaatgtacaaaatatgtgagatcaaattaaaatcatgatctagtat
atgtttcatttcagttttaaatactgctgctctttacatacaaggaaata
gacatggcattctgatggaagaataaaacagaaatgtaataagatcatac
tgactatctagaaacatcgatatttgtcacgagggagagaaatactgcaa
taagaactgccagat
gaattccatcattgttgctgtggatgaggtatggtaatgtctctcaagag
tctttttgtggagcttctgaggtggtgccatctacggctccagacaacca
gccaccttcatggtgagagcacaggggtctgcccggcccgagaggtttct
gcctcaggctccagtgggagccaccttggttccgggactccacggagggc
aggctgcacaggtgagggtgtggaatacagaggccagccgtttctgggac
aggagagagccacagagcttctgaggtggcaccatctttggatccagaca
acccgccaccttcctggccaaagcaacacagcttctgggaaagatcctgt
tttgggccttcatcttcagccaggaggaggtccaaacaccagataactgt
gcaccttccctgaaagaggagagcttgcctgcagagactgctctgaccac
tgaaactcagaggagagagctagtctcccacgtctgctgctagagggtaa
caaaatcaccagaggaacaatctctaaacaaagaaaactataacaactaa
ctccagagattgccagatggcgaaaggtaaacgtaagaatccaactaaca
gaaaccaggaccactcaccatcatcagaacccagaacgcccacttcgccc
agtccagggcacaataaaacacctgaaatggtagacctggatttaaaagc
atatctcatgatgatggtagaggacataaagaaggaatttaataactcac
ttaaagaaatacagaagaacactgctaaagagttacaagtccttaaagaa
aaacaggaaaacacaaccaaacaggtagaagtccttatagaaaaacagga
aaacacatccaaacaggtgatggaaatgaacaaaaccatactagacctaa
aaagggaagtagacacaataataaacccaaagtgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_86486050_86487228
seq2: B6Ng01-070H11.b_49_1213 (reverse)

seq1  ATCTTGCAGTTCTTTATATGCAAGTATTTCTACTGCCTCGTGACAAATAT  50
      |||| ||||||| |||| ||| ||||||||| || |||||||||||||||
seq2  ATCTGGCAGTTC-TTAT-TGC-AGTATTTCT-CTCCCTCGTGACAAATAT  46

seq1  CGATGTTTCTAGATTAGTCAGTAATGAATCCTTATTACATTTCTG-TTTA  99
      ||||||||||||| |||||||| ||||   ||||||||||||||| ||||
seq2  CGATGTTTCTAGA-TAGTCAGT-ATGA--TCTTATTACATTTCTGTTTTA  92

seq1  TTCTTCCATCAGAATGCCCATGTCTATTTCCTTGTATGTAAAGAGCAGCA  149
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTCTTCCATCAGAATG-CCATGTCTATTTCCTTGTATGTAAAGAGCAGCA  141

seq1  GTAATTTAAAAACTGAAATGAAACAATATACTAGATCAATGATTTTAATT  199
      |||  || |||||||||||||||| |||||||||||| ||||||||||||
seq2  GTA--TTTAAAACTGAAATGAAAC-ATATACTAGATC-ATGATTTTAATT  187

seq1  TGATCTTCACATATTTTGTACATTAGAAAGGTATTGATAAAATACAACAT  249
      ||||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  TGATC-TCACATATTTTGTACATTAGAAAGGTATTGAT-AAATACAACAT  235

seq1  TTAGATTGTTTAATGCATTCAATCCTAAAACATATGTAACACAATTATGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTGTTTAATGCATTCAATCCTAAAACATATGTAACACAATTATGG  285

seq1  CTCAGGTCTTAGATTCTCAGAAAGGTCCTATCCTCAAGGACTGGGTGCTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTCTTAGATTCTCAGAAAGGTCCTATCCTCAAGGACTGGGTGCTA  335

seq1  GTTCATGGTACAACTGAAAGCTGGTAGCATCTTTGGAAGGTGATACCTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATGGTACAACTGAAAGCTGGTAGCATCTTTGGAAGGTGATACCTAA  385

seq1  TAGAATGAAGTTGAATCCTTAGAATTGTACCCTTACAAAGCATCTTGGCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGAAGTTGAATCCTTAGAATTGTACCCTTACAAAGCATCTTGGCC  435

seq1  CTTTGTGTTTTTCAATTTCTAGATACAACATGTTGCACAGTATTATTCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTTTTTCAATTTCTAGATACAACATGTTGCACAGTATTATTCTT  485

seq1  CTGTATACACCCTACCATGATGCTTGGTTCCACTACAGATCCAAATATAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATACACCCTACCATGATGCTTGGTTCCACTACAGATCCAAATATAT  535

seq1  CATAGCCAGTAGAGCACAGTCATAAACCAGGTGGCAAAAATAAATCTTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCCAGTAGAGCACAGTCATAAACCAGGTGGCAAAAATAAATCTTTC  585

seq1  CCTTTGTTGTTTTCCTTAGTTGTTTGTCATGATAATGAAAGAATGGTTAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTTGTTTTCCTTAGTTGTTTGTCATGATAATGAAAGAATGGTTAA  635

seq1  CAAATTAGCATTTATTCACAGCATTATTAGCACCAGTTTTCATAAAACTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTAGCATTTATTCACAGCATTATTAGCACCAGTTTTCATAAAACTA  685

seq1  GCACATTAACTGAAATGTTTTCACAAAGTATGCATCATTGATGTGGCAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTAACTGAAATGTTTTCACAAAGTATGCATCATTGATGTGGCAAG  735

seq1  AAAAAGTAAAGTGAAGCAAATAAAGTGGGTCACAAAAGATGTTTACATGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTAAAGTGAAGCAAATAAAGTGGGTCACAAAAGATGTTTACATGG  785

seq1  TCACATGATCTGAGCCACTTTGGGAATAAACAAAAATGTTCCAGTTTCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGATCTGAGCCACTTTGGGAATAAACAAAAATGTTCCAGTTTCTT  835

seq1  GAATGTCAGACTGTCTTCTTACTCAGAGTTATTAGGTCAAGTTGATGCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCAGACTGTCTTCTTACTCAGAGTTATTAGGTCAAGTTGATGCTG  885

seq1  CGGGTCTAGGGTCTACCTCACGACTGAATTCCTGACAGACGATGCTGAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTCTAGGGTCTACCTCACGACTGAATTCCTGACAGACGATGCTGAAA  935

seq1  AGCCAACTTATAGTAAGATGTTGACTGCTTGTATTCAGCTGCATATGAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACTTATAGTAAGATGTTGACTGCTTGTATTCAGCTGCATATGAGA  985

seq1  AGTTTATGATGAAAAAAATGTATATTTTTGTTTTAGTATCTTATTTATAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATGATGAAAAAAATGTATATTTTTGTTTTAGTATCTTATTTATAT  1035

seq1  CTTCATTTCATGCAAGTGTTCTTATTTCAGTGATAAATTGCCTCAAATAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTCATGCAAGTGTTCTTATTTCAGTGATAAATTGCCTCAAATAT  1085

seq1  ATGTGAAAGAAAAATATTTATAAATTAAAACTGTTTATTTGATTGATTAC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAAGAAAAATATTTATAAATTAAAACTGTTTATTTGATTGATTAC  1135

seq1  TTATAAGATTTAGGAATTTGAACAGAATTC  1179
      ||||||||||||||||||||||||||||||
seq2  TTATAAGATTTAGGAATTTGAACAGAATTC  1165

seq1: chr16_86331910_86332466
seq2: B6Ng01-070H11.g_67_623

seq1  GAATTCCATCATTGTTGCTGTGGATGAGGTATGGTAATGTCTCTCAAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCATTGTTGCTGTGGATGAGGTATGGTAATGTCTCTCAAGAG  50

seq1  TCTTTTTGTGGAGCTTCTGAGGTGGTGCCATCTACGGCTCCAGACAACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTGTGGAGCTTCTGAGGTGGTGCCATCTACGGCTCCAGACAACCA  100

seq1  GCCACCTTCATGGTGAGAGCACAGGGGTCTGCCCGGCCCGAGAGGTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTTCATGGTGAGAGCACAGGGGTCTGCCCGGCCCGAGAGGTTTCT  150

seq1  GCCTCAGGCTCCAGTGGGAGCCACCTTGGTTCCGGGACTCCACGGAGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGGCTCCAGTGGGAGCCACCTTGGTTCCGGGACTCCACGGAGGGC  200

seq1  AGGCTGCACAGGTGAGGGTGTGGAATACAGAGGCCAGCCGTTTCTGGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCACAGGTGAGGGTGTGGAATACAGAGGCCAGCCGTTTCTGGGAC  250

seq1  AGGAGAGAGCCACAGAGCTTCTGAGGTGGCACCATCTTTGGATCCAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAGCCACAGAGCTTCTGAGGTGGCACCATCTTTGGATCCAGACA  300

seq1  ACCCGCCACCTTCCTGGCCAAAGCAACACAGCTTCTGGGAAAGATCCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGCCACCTTCCTGGCCAAAGCAACACAGCTTCTGGGAAAGATCCTGT  350

seq1  TTTGGGCCTTCATCTTCAGCCAGGAGGAGGTCCAAACACCAGATAACTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCCTTCATCTTCAGCCAGGAGGAGGTCCAAACACCAGATAACTGT  400

seq1  GCACCTTCCCTGAAAGAGGAGAGCTTGCCTGCAGAGACTGCTCTGACCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTTCCCTGAAAGAGGAGAGCTTGCCTGCAGAGACTGCTCTGACCAC  450

seq1  TGAAACTCAGAGGAGAGAGCTAGTCTCCCACGTCTGCTGCTAGAGGGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTCAGAGGAGAGAGCTAGTCTCCCACGTCTGCTGCTAGAGGGTAA  500

seq1  CAAAATCACCAGAGGAACAATCTCTAAACAAAGAAAACTATAACAACTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCACCAGAGGAACAATCTCTAAACAAAGAAAACTATAACAACTAA  550

seq1  CTCCAGA  557
      |||||||
seq2  CTCCAGA  557