BAC Information

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BAC

Clone NameB6Ng01-071D24
Chromosome16 (Build37)
Map Location 57,674,801 - 57,834,561
singlet/doubletdoublet
Overlap geneCol8a1, LOC435480
Upstream geneAbi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik
Downstream geneLOC629342, LOC100043477, Dcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071D24.bB6Ng01-071D24.g
ACCDH889002DH889003
length1,1471,145
definitionDH889002|Mus musculus domesticus DNA, BAC clone: B6Ng01-071D24, 5' end.DH889003|Mus musculus domesticus DNA, BAC clone: B6Ng01-071D24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,833,424 - 57,834,561)(57,674,801 - 57,675,967)
sequence
gaattctttagggatttggcaaccgtgttgaatagaattttgagtagagt
ctactatgtctattgagactgcctttacctactaatcatatttttctaaa
aaaagaatcatagttgatttttagaccattttttaaaagattttatttat
ttaatgtatgtaagtgcattgtagctgtcttcagatacaccagatctcat
tatagataagtgtgagccaccacgtgggtgctggaatttgaactcaggaa
gagcagtctgtggtcataacctcggagccacctctccagcccctagacca
tattctcaagactgccctatgtctacaaaaactttgattgttattccatt
tcaaatgtgtttcgagagtattttatctcagaatatttaaccacgcacaa
ctcaccagctgtgtttagtcaatatcttctggtaaaatcagtacacgagt
gcaaactaaaacttgttttcagtgttagtgttttaggtccatgactactc
taacacttatgctacccccatcagcattcagcaagttgggatattcaaag
aaggcccaatcaatcaataaagtgaaaatagtttttaaaaatataaacaa
cgttaagaaaaataaaatccatagtctgttagatgcttgaattatcaatt
atctagtattactagaaaacataaatgtctatgcaaccattgtctttcaa
ggcatataagtaaacacatctcagtaccattgaaaatactatgtccacta
gataatcatcctgatttttgcaaataagatgtagcatctaacctttatga
caaaagtaataatattgcaaatgattctttctgcttcatagcagccaaat
aaatataaattgttcctgtttagcaaaaatcatgagggctcttgtgataa
atacttcttaaagtagagaaatgggatattaaattttccaaatatgcatt
atattgctaaagcagaagtcacagttaaaactgaattcatactgtaagta
gccactacctagagcagaggctgctaaaggtcttttggtcatgacatggt
taaaatattatattaaaatataataaatacccttaccataatgcccccca
ccccccataccacccaccccttaaagaaaatggtatttaacctttac
gaattctctggcctagcagtacaccagagcagggtgtgagtcgtctatac
aaagtcattttctggtagccgtgctaaatcatgcaaagagacaggtaaac
gtatatatactgagttatacatagtaatatattcatcactatctaaacca
tgttacttcgttgaactcaggatattgcaaatataatttcagcatgcatt
cttttttttttttttaaatcgtgccttaagaatttggaatatgtctccta
tgaaaagcatatcttgatgaggccgaaccacatttcaagtggtttgtgag
caccacattagaaatgctgcctgtctctgtgtatcacactggaagatacc
agagcgtggcaatatggtatagagggatgccggagaccagcaccacatct
acaattgtctgttttctggctctgacatttgctattgatgtgactatgaa
gaagcgatttagtttctctgggtctcaaatcccccattctttaaaatgga
aaattttatatgactactatattcctctcaggaggctccgggtaagattg
aataacatattgtatgtgaaagtgtgatgttaaaccataaaatgccaagc
acatgtaagacattattatgtcttttatcgtagattttgctctcatgact
tgcccaaggccacattctgaattggtagggaatggaggttagtatctggg
gcctctaacttccagccatctgcttcagctaaatgctgctcataccaaac
tagtttaaaatggtgcttttttccccccaaagatctttttatttaaaaga
ttgaggaaagaggagagtggcattaagaagtaaattccatatgaacagtt
acttgcataatgtttttcagctaagtatatataaggtatttatatcctta
tatacttagaattatagccatcatgactggactttactgccatcatatac
ataaaaccccatgttattcaaagtttcaaacaatgtttgattaaactgta
atttcttcacttctatccctaaaacagcacaccacagaagtctctggtgc
tggaacttgattatgacacagaaatgatcatgctgcagtttccataaatt
ttggttacgatgtcttcatagtttcatgtggaaccccccacttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_57833424_57834561
seq2: B6Ng01-071D24.b_41_1187 (reverse)

seq1  GTAAAGG-TAAATACCA-TTTCTTTAA-GTGTGTGT-GTATGTGTG--TG  44
      ||||||| ||||||||| ||||||||| | ||| || ||||| | |   |
seq2  GTAAAGGTTAAATACCATTTTCTTTAAGGGGTGGGTGGTATGGGGGGTGG  50

seq1  TGTGCA-TATGATAA-GGTA-TTATTATAATTTTAAATATATATTTT-AC  90
       | ||| |||| ||| |||| |||||||| ||| | ||| ||||||| ||
seq2  GGGGCATTATGGTAAGGGTATTTATTATATTTTAATATA-ATATTTTAAC  99

seq1  CATGTCATGACCAAAAGACC-TTAGCAGCCTCTGCTCTAGGTAGTGGCTA  139
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CATGTCATGACCAAAAGACCTTTAGCAGCCTCTGCTCTAGGTAGTGGCTA  149

seq1  CTTACAGTATGAATTCAGTTTTTAACTGTGACTTCTGCTTTAGCAATATA  189
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTTACAGTATGAATTCAG-TTTTAACTGTGACTTCTGCTTTAGCAATATA  198

seq1  ATGCATATTTGGAAAATTTAATATCCCATTTCTCTACTTTAAGAAGTATT  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATATTTGGAAAATTTAATATCCCATTTCTCTACTTTAAGAAGTATT  248

seq1  TATCACAAGAGCCCTCATGATTTTTGCTAAACAGGAACAATTTATATTTA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACAAGAGCCCTCATGATTTTTGCTAAACAGGAACAATTTATATTTA  298

seq1  TTTGGCTGCTATGAAGCAGAAAGAATCATTTGCAATATTATTACTTTTGT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTGCTATGAAGCAGAAAGAATCATTTGCAATATTATTACTTTTGT  348

seq1  CATAAAGGTTAGATGCTACATCTTATTTGCAAAAATCAGGATGATTATCT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGGTTAGATGCTACATCTTATTTGCAAAAATCAGGATGATTATCT  398

seq1  AGTGGACATAGTATTTTCAATGGTACTGAGATGTGTTTACTTATATGCCT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGACATAGTATTTTCAATGGTACTGAGATGTGTTTACTTATATGCCT  448

seq1  TGAAAGACAATGGTTGCATAGACATTTATGTTTTCTAGTAATACTAGATA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGACAATGGTTGCATAGACATTTATGTTTTCTAGTAATACTAGATA  498

seq1  ATTGATAATTCAAGCATCTAACAGACTATGGATTTTATTTTTCTTAACGT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATAATTCAAGCATCTAACAGACTATGGATTTTATTTTTCTTAACGT  548

seq1  TGTTTATATTTTTAAAAACTATTTTCACTTTATTGATTGATTGGGCCTTC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATATTTTTAAAAACTATTTTCACTTTATTGATTGATTGGGCCTTC  598

seq1  TTTGAATATCCCAACTTGCTGAATGCTGATGGGGGTAGCATAAGTGTTAG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATATCCCAACTTGCTGAATGCTGATGGGGGTAGCATAAGTGTTAG  648

seq1  AGTAGTCATGGACCTAAAACACTAACACTGAAAACAAGTTTTAGTTTGCA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTCATGGACCTAAAACACTAACACTGAAAACAAGTTTTAGTTTGCA  698

seq1  CTCGTGTACTGATTTTACCAGAAGATATTGACTAAACACAGCTGGTGAGT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGTACTGATTTTACCAGAAGATATTGACTAAACACAGCTGGTGAGT  748

seq1  TGTGCGTGGTTAAATATTCTGAGATAAAATACTCTCGAAACACATTTGAA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCGTGGTTAAATATTCTGAGATAAAATACTCTCGAAACACATTTGAA  798

seq1  ATGGAATAACAATCAAAGTTTTTGTAGACATAGGGCAGTCTTGAGAATAT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATAACAATCAAAGTTTTTGTAGACATAGGGCAGTCTTGAGAATAT  848

seq1  GGTCTAGGGGCTGGAGAGGTGGCTCCGAGGTTATGACCACAGACTGCTCT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAGGGGCTGGAGAGGTGGCTCCGAGGTTATGACCACAGACTGCTCT  898

seq1  TCCTGAGTTCAAATTCCAGCACCCACGTGGTGGCTCACACTTATCTATAA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGTTCAAATTCCAGCACCCACGTGGTGGCTCACACTTATCTATAA  948

seq1  TGAGATCTGGTGTATCTGAAGACAGCTACAATGCACTTACATACATTAAA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCTGGTGTATCTGAAGACAGCTACAATGCACTTACATACATTAAA  998

seq1  TAAATAAAATCTTTTAAAAAATGGTCTAAAAATCAACTATGATTCTTTTT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAATCTTTTAAAAAATGGTCTAAAAATCAACTATGATTCTTTTT  1048

seq1  TTAGAAAAATATGATTAGTAGGTAAAGGCAGTCTCAATAGACATAGTAGA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAAATATGATTAGTAGGTAAAGGCAGTCTCAATAGACATAGTAGA  1098

seq1  CTCTACTCAAAATTCTATTCAACACGGTTGCCAAATCCCTAAAGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTCAAAATTCTATTCAACACGGTTGCCAAATCCCTAAAGAATTC  1147

seq1: chr16_57674801_57675967
seq2: B6Ng01-071D24.g_66_1210

seq1  GAATTCTCTGGCCTAGCAGTACACCAGAGCAGGGTGTGAGTCGTCTATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGCCTAGCAGTACACCAGAGCAGGGTGTGAGTCGTCTATAC  50

seq1  AAAGTCATTTTCTGGTAGCCGTGCTAAATCATGCAAAGAGACAGGTAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCATTTTCTGGTAGCCGTGCTAAATCATGCAAAGAGACAGGTAAAC  100

seq1  GTATATATACTGAGTTATACATAGTAATATATTCATCACTATCTAAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATATACTGAGTTATACATAGTAATATATTCATCACTATCTAAACCA  150

seq1  TGTTACTTCGTTGAACTCAGGATATTGCAAATATAATTTCAGCATGCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTTCGTTGAACTCAGGATATTGCAAATATAATTTCAGCATGCATT  200

seq1  CTTTTTTTTTTTTTTAAATCGTGCCTTAAGAATTTGGAATATGTCTCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTTTTTTTAAATCGTGCCTTAAGAATTTGGAATATGTCTCCTA  250

seq1  TGAAAAGCATATCTTGATGAGGCCGAACCACATTTCAAGTGGTTTGTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGCATATCTTGATGAGGCCGAACCACATTTCAAGTGGTTTGTGAG  300

seq1  CACCACATTAGAAATGCTGCCTGTCTCTGTGTATCACACTGGAAGATACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACATTAGAAATGCTGCCTGTCTCTGTGTATCACACTGGAAGATACC  350

seq1  AGAGCGTGGCAATATGGTATAGAGGGATGCCGGAGACCAGCACCACATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCGTGGCAATATGGTATAGAGGGATGCCGGAGACCAGCACCACATCT  400

seq1  ACAATTGTCTGTTTTCTGGCTCTGACATTTGCTATTGATGTGACTATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGTCTGTTTTCTGGCTCTGACATTTGCTATTGATGTGACTATGAA  450

seq1  GAAGCGATTTAGTTTCTCTGGGTCTCAAATCCCCCATTCTTTAAAATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCGATTTAGTTTCTCTGGGTCTCAAATCCCCCATTCTTTAAAATGGA  500

seq1  AAATTTTATATGACTACTATATTCCTCTCAGGAGGCTCCGGGTAAGATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTATATGACTACTATATTCCTCTCAGGAGGCTCCGGGTAAGATTG  550

seq1  AATAACATATTGTATGTGAAAGTGTGATGTTAAACCATAAAATGCCAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATATTGTATGTGAAAGTGTGATGTTAAACCATAAAATGCCAAGC  600

seq1  ACATGTAAGACATTATTATGTCTTTTATCGTAGATTTTGCTCTCATGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAAGACATTATTATGTCTTTTATCGTAGATTTTGCTCTCATGACT  650

seq1  TGCCCAAGGCCACATTCTGAATTGGTAGGGAATGGAGGTTAGTATCTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAAGGCCACATTCTGAATTGGTAGGGAATGGAGGTTAGTATCTGGG  700

seq1  GCCTCTAACTTCCAGCCATCTGCTTCAGCTAAATGCTGCTCATACCAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTAACTTCCAGCCATCTGCTTCAGCTAAATGCTGCTCATACCAAAC  750

seq1  TAGTTTAAAATGGTGCTTTTTTCCCCCCAAAGATCTTTTTATTTAAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTAAAATGGTGCTTTTTTCCCCCCAAAGATCTTTTTATTTAAAAGA  800

seq1  TTGAGGAAAGAGGAGAGTGGCATTAAGAAGTAAATTCCATATGAACAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAAAGAGGAGAGTGGCATTAAGAAGTAAATTCCATATGAACAGTT  850

seq1  ACTTGCATAATGTTTTTCAGCTAAAGTATATATAAGGGTATTTATATCCT  900
      |||||||||||||||||||||| |||||||||||| ||||||||||||||
seq2  ACTTGCATAATGTTTTTCAGCT-AAGTATATATAA-GGTATTTATATCCT  898

seq1  TATATACTTAGAATTATAGCCATCAATGACTGGACTTTACTGCCATCATA  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TATATACTTAGAATTATAGCCATC-ATGACTGGACTTTACTGCCATCATA  947

seq1  TAACATAAAACCCCATGTTATTCAAAGTTTCAAACAATGTTTGAATTAAA  1000
      | ||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  T-ACATAAAACCCCATGTTATTCAAAGTTTCAAACAATGTTTG-ATTAAA  995

seq1  CTGTAATTTC-TCAACTCTATCTCTAAAACAGCACAACCACAAGAAAGTC  1049
      |||||||||| |||  |||||| |||||||||||| ||||||   |||||
seq2  CTGTAATTTCTTCACTTCTATCCCTAAAACAGCAC-ACCACA--GAAGTC  1042

seq1  CTTCT-GTGCTGG-ACTTGATTAATGACACAGATATGGATCAATGCTGCA  1097
        ||| ||||||| |||||||| |||||||||| || |||| ||||||||
seq2  --TCTGGTGCTGGAACTTGATT-ATGACACAGAAAT-GATC-ATGCTGCA  1087

seq1  AGTTTTCCATGGATATTTTTGGTTACAGATGTCCTTCATTAGTTCTCATG  1147
         |||||||    | |||||||||| ||||| ||||| ||||| |||||
seq2  --GTTTCCAT---AAATTTTGGTTAC-GATGT-CTTCA-TAGTT-TCATG  1128

seq1  TGTGAGACACCACCACTTAT  1167
      ||   ||  || ||||||||
seq2  TG---GAACCCCCCACTTAT  1145