BAC Information

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BAC

Clone NameB6Ng01-071O10
Chromosome16 (Build37)
Map Location 35,743,037 - 35,931,916
singlet/doubletdoublet
Overlap geneDirc2, Hspbap1, Parp14, LOC667133, LOC100043217, Dtx3l
Upstream geneMylk, Ptplb, Adcy5, Sec22a, Pdia5, Sema5b, EG546663
Downstream geneParp9, Kpna1, Wdr5b, 2310056P07Rik, Ccdc58, Csta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324, LOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr, EG667232, Cd86, Ildr1, LOC667246, Slc15a2, LOC667023, Eaf2, Iqcb1, LOC628101, Golgb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071O10.bB6Ng01-071O10.g
ACCDH889467DH889468
length1,127941
definitionDH889467|Mus musculus domesticus DNA, BAC clone: B6Ng01-071O10, 5' end.DH889468|Mus musculus domesticus DNA, BAC clone: B6Ng01-071O10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,743,037 - 35,744,185)(35,931,141 - 35,931,916)
sequence
gaattcaagcactcctacccagccaccgaggacagtggatagaaacagtc
tgagcagtcagaggagctacttactatggatgtgacagcacggttgctag
acaagggactggatgtgttccctgcacaggaaatgcacagtgtgtctgaa
aacaatctgtttcctttcttttgttacagtatctccaagctttaggatag
ttatcaaggtggtccacattaaactggggagtaggggctggagatgctgg
cagctgagctatgctttgccccttttgcagatggatgtgcatgaccacat
gataagcctgaaccaatgagaggtgagataaatgatgcgcacagcctctg
ctcattgtctaatgatgctatgataaccctgtttaggagccagctcttgt
cacatggtcagggtggtcatcgtagggaatgctggaactacccacttctc
ttaagtaccttgctattttttaggctgctgtaggtcactcacaatattaa
tatttgaaataaaatgaaacttttattgagctgtatttttggtctctttg
ttacagaggacggcctatttattaaatcagaagtaggttatgtaaatatt
gaccgaattatcgatttaaatgacagaaaccaacatttattaagtaggac
tactgtttccatttcatggactttttttcatttttgaaaaatttttgtta
taattacaccatttttcctgtctttttctcccttccaacccttgcccttt
ttttgtttgtttgtttgttttaatgctttgaaggctaatcttggttgtca
acttggcacacctaggctaaaagagggagtctcagctaaagaactgcttc
tgactggcctgtgggcatgtcaatggggcattttctttactgctaacttg
atgcagaaagctcatcctctgtggtgatgccatccctgggcagtggcccg
agctgtatgcgaagcagtgaaacaacttcacacagtagcaccggtcttca
caactcacattagtagcactgctcctcgtgctctgcttccggtctgccgt
cctgctctgacttcttcagtgacgagtgagaagaaaaccctttcttccct
caatggttgggcaatttcttacatagt
gaattcatatgttaggatgggaggagttgggcaggtagtgttctaatttg
aagagaactatgaattattcagaatatgagtaaaatgttaatatttttct
ggctttcaataggcttcatctaccatgaacataactttactaaaaataga
ggcatccatatgtgtacacacatgcacacacccacatacacacacacaca
cacacacatacacatatataattttcttttcttcatacagaaagagcacc
caaacccaggaaaggcttatcatggaacacggcgaactgcatacttgcct
gataatactgagggaagaaaggttttggatctgctccacgaagcctttaa
gcacagactgactttcacaataggatactctcgagcaacaggagtctcgg
atgtcattacatggaatgatattcatcacaaaacatccaagtttggagga
ccagcaaagtaagagccttttgaaatgtagtggttgctgaatgaagttca
aggttgtcaaacactgcagtttgaggctgtggggatagaaagacattcta
gcagtagatgttagcctggtgtcttagttagggttactgtagctgtgata
acccaaaaaaaaacaacttcaggatgatgggtttatttgccttacatatt
ctgagtcacaggccactgaaggaagacaaggcagaatctcaaaggaggca
ggaacctgaagacaggaacggatgcagaggccatgaaggaacattggtta
tggcttgctcagcctgctttcttacagcatccaggatcaccagtccaggg
gtgacaccactgacattgggctgggcccttctgacatcaatctctaatta
agaaaaagctatacagagaaaccctgtctcgaaaaccaaaagagagagag
agagagagagagagagagagagagagagagagagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_35743037_35744185
seq2: B6Ng01-071O10.b_49_1175

seq1  GAATTCAAGCACTCCTACCCAGCCACCGAGGACAGTGGATAGAAACAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCACTCCTACCCAGCCACCGAGGACAGTGGATAGAAACAGTC  50

seq1  TGAGCAGTCAGAGGAGCTACTTACTATGGATGTGACAGCACGGTTGCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGTCAGAGGAGCTACTTACTATGGATGTGACAGCACGGTTGCTAG  100

seq1  ACAAGGGACTGGATGTGTTCCCTGCACAGGAAATGCACAGTGTGTCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGACTGGATGTGTTCCCTGCACAGGAAATGCACAGTGTGTCTGAA  150

seq1  AACAATCTGTTTCCTTTCTTTTGTTACAGTATCTCCAAGCTTTAGGATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCTGTTTCCTTTCTTTTGTTACAGTATCTCCAAGCTTTAGGATAG  200

seq1  TTATCAAGGTGGTCCACATTAAACTGGGGAGTAGGGGCTGGAGATGCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAGGTGGTCCACATTAAACTGGGGAGTAGGGGCTGGAGATGCTGG  250

seq1  CAGCTGAGCTATGCTTTGCCCCTTTTGCAGATGGATGTGCATGACCACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGAGCTATGCTTTGCCCCTTTTGCAGATGGATGTGCATGACCACAT  300

seq1  GATAAGCCTGAACCAATGAGAGGTGAGATAAATGATGCGCACAGCCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGCCTGAACCAATGAGAGGTGAGATAAATGATGCGCACAGCCTCTG  350

seq1  CTCATTGTCTAATGATGCTATGATAACCCTGTTTAGGAGCCAGCTCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTGTCTAATGATGCTATGATAACCCTGTTTAGGAGCCAGCTCTTGT  400

seq1  CACATGGTCAGGGTGGTCATCGTAGGGAATGCTGGAACTACCCACTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGTCAGGGTGGTCATCGTAGGGAATGCTGGAACTACCCACTTCTC  450

seq1  TTAAGTACCTTGCTATTTTTTAGGCTGCTGTAGGTCACTCACAATATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTACCTTGCTATTTTTTAGGCTGCTGTAGGTCACTCACAATATTAA  500

seq1  TATTTGAAATAAAATGAAACTTTTATTGAGCTGTATTTTTGGTCTCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAAATAAAATGAAACTTTTATTGAGCTGTATTTTTGGTCTCTTTG  550

seq1  TTACAGAGGACGGCCTATTTATTAAATCAGAAGTAGGTTATGTAAATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAGGACGGCCTATTTATTAAATCAGAAGTAGGTTATGTAAATATT  600

seq1  GACCGAATTATCGATTTAAATGACAGAAACCAACATTTATTAAGTAGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGAATTATCGATTTAAATGACAGAAACCAACATTTATTAAGTAGGAC  650

seq1  TACTGTTTCCATTTCATGGACTTTTTTTCATTTTTGAAAAATTTTTGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTTCCATTTCATGGACTTTTTTTCATTTTTGAAAAATTTTTGTTA  700

seq1  TAATTACACCATTTTTCCTGTCTTTTTCTCCCTTCCAACCCTTGCCCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACACCATTTTTCCTGTCTTTTTCTCCCTTCCAACCCTTGCCCTTT  750

seq1  TTTTGTTTGTTTGTTTGTTTTAATGCTTTGAAGGCTAATCTTGGTTGTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGTTTGTTTGTTTTAATGCTTTGAAGGCTAATCTTGGTTGTCA  800

seq1  ACTTGGCACACCTAGGCTAAAAGAGGGAGTCTCAGCTAAAGAACTGCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCACACCTAGGCTAAAAGAGGGAGTCTCAGCTAAAGAACTGCTTC  850

seq1  TGACTGGCCTGTGGGCATGTCAATGGGGCATTTTCTTTACGGCTAACTTG  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGACTGGCCTGTGGGCATGTCAATGGGGCATTTTCTTTACTGCTAACTTG  900

seq1  ATGCAGGAAGGCTCATCCTCTGTGGTGATGCCATCCCTGGGCAGGTGGCC  950
      ||||| ||| ||||||||||||||||||||||||||||||||| ||||||
seq2  ATGCA-GAAAGCTCATCCTCTGTGGTGATGCCATCCCTGGGCA-GTGGCC  948

seq1  CGAGCTGTATGCGAAGCAGTGAAACAACCTCACACCAGTAAGCACCGGTC  1000
      |||||||||||||||||||||||||||| ||||| |||| ||||||||| 
seq2  CGAGCTGTATGCGAAGCAGTGAAACAACTTCACA-CAGT-AGCACCGGT-  995

seq1  CTCCACAACCTCACATTAGTAGGCACTGCTCCTCCGTGGCTCTGCTTCCG  1050
      || ||||| |||||||||||| ||||||||||| ||| ||||||||||||
seq2  CTTCACAA-CTCACATTAGTA-GCACTGCTCCT-CGT-GCTCTGCTTCCG  1041

seq1  GTTCTGCCCGGTCCCTGCTCTGACTTCTTCCAGTGACGGAGTGAGGAAGA  1100
      | ||||||  || |||||||||||||||| ||||||| |||||| |||||
seq2  G-TCTGCC--GT-CCTGCTCTGACTTCTT-CAGTGAC-GAGTGA-GAAGA  1084

seq1  AATACCCTTTCCTCCCCTACATTGGTTTTGGGCAATGTCTTATCATAGT  1149
      || |||||||| ||||   || |||  ||||||||| ||||| ||||||
seq2  AA-ACCCTTTCTTCCC--TCAATGG--TTGGGCAATTTCTTA-CATAGT  1127

seq1: chr16_35931141_35931916
seq2: B6Ng01-071O10.g_67_842 (reverse)

seq1  TGTAAGAAAGCAGGCTGAGCAAGCCATAACCAATGTTCCTTCATGGCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGAAAGCAGGCTGAGCAAGCCATAACCAATGTTCCTTCATGGCCTC  50

seq1  TGCATCCGTTCCTGTCTTCAGGTTCCTGCCTCCTTTGAGATTCTGCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCGTTCCTGTCTTCAGGTTCCTGCCTCCTTTGAGATTCTGCCTTG  100

seq1  TCTTCCTTCAGTGGCCTGTGACTCAGAATATGTAAGGCAAATAAACCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTCAGTGGCCTGTGACTCAGAATATGTAAGGCAAATAAACCCAT  150

seq1  CATCCTGAAGTTGTTTTTTTTTGGGTTATCACAGCTACAGTAACCCTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGAAGTTGTTTTTTTTTGGGTTATCACAGCTACAGTAACCCTAAC  200

seq1  TAAGACACCAGGCTAACATCTACTGCTAGAATGTCTTTCTATCCCCACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACACCAGGCTAACATCTACTGCTAGAATGTCTTTCTATCCCCACAG  250

seq1  CCTCAAACTGCAGTGTTTGACAACCTTGAACTTCATTCAGCAACCACTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAACTGCAGTGTTTGACAACCTTGAACTTCATTCAGCAACCACTAC  300

seq1  ATTTCAAAAGGCTCTTACTTTGCTGGTCCTCCAAACTTGGATGTTTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAAAGGCTCTTACTTTGCTGGTCCTCCAAACTTGGATGTTTTGTG  350

seq1  ATGAATATCATTCCATGTAATGACATCCGAGACTCCTGTTGCTCGAGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATCATTCCATGTAATGACATCCGAGACTCCTGTTGCTCGAGAGT  400

seq1  ATCCTATTGTGAAAGTCAGTCTGTGCTTAAAGGCTTCGTGGAGCAGATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTATTGTGAAAGTCAGTCTGTGCTTAAAGGCTTCGTGGAGCAGATCC  450

seq1  AAAACCTTTCTTCCCTCAGTATTATCAGGCAAGTATGCAGTTCGCCGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTTTCTTCCCTCAGTATTATCAGGCAAGTATGCAGTTCGCCGTGT  500

seq1  TCCATGATAAGCCTTTCCTGGGTTTGGGTGCTCTTTCTGTATGAAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGATAAGCCTTTCCTGGGTTTGGGTGCTCTTTCTGTATGAAGAAAA  550

seq1  GAAAATTATATATGTGTATGTGTGTGTGTGTGTGTGTGTATGTGGGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTATATATGTGTATGTGTGTGTGTGTGTGTGTGTATGTGGGTGTG  600

seq1  TGCATGTGTGTACACATATGGATGCCTCTATTTTTAGTAAAGTTATGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGTGTACACATATGGATGCCTCTATTTTTAGTAAAGTTATGTTC  650

seq1  ATGGTAGATGAAGCCTATTGAAAGCCAGAAAAATATTAACATTTTACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGATGAAGCCTATTGAAAGCCAGAAAAATATTAACATTTTACTCA  700

seq1  TATTCTGAATAATTCATAGTTCTCTTCAAATTAGAACACTACCTGCCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGAATAATTCATAGTTCTCTTCAAATTAGAACACTACCTGCCCAA  750

seq1  CTCCTCCCATCCTAACATATGAATTC  776
      ||||||||||||||||||||||||||
seq2  CTCCTCCCATCCTAACATATGAATTC  776