BAC Information

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BAC

Clone NameB6Ng01-072B23
Chromosome16 (Build37)
Map Location 58,235,503 - 58,236,609
singlet/doubletsinglet
Overlap geneLOC100043477
Upstream geneTmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480, LOC629342
Downstream geneDcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072B23.bB6Ng01-072B23.g
ACCDH889625DH889626
length1,1571,090
definitionDH889625|Mus musculus domesticus DNA, BAC clone: B6Ng01-072B23, 5' end.DH889626|Mus musculus domesticus DNA, BAC clone: B6Ng01-072B23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccggatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgttgtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggaatctatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattaaaa
ggacccagatgtagctgtctcttgtgagactatgcccgggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaacgaacccaagagctaaagggatctgcaccctat
agtgacacatatgactaaccagtacccggagctctgactctagctgcata
tatatcaaagatgctagtcgcatcactgaaagaaagtcattgactgcaac
tttatatggccagttaagggaacccagcaaaggggatggttgccagggag
tggggtg
gaattccaggaccacagggaatctctatgccactatcatttcagtcttag
cctcaataaggcagatacctgggaataccaattcctcatccatcttagta
gactatattggagggcatgtagtggctactgggaatgcgactagtattat
tttacatatgtatactaataaattttttaggtgtttgactttcaaattat
tttcgtgaatgaattatatatataaaagtagagtcttcctataaaagaaa
aattaaaatacaatctttacaccattgagtgaacatgctttgtttaacag
aataagaaaaaaaaaactattaagcaggattttttatatggatttgccta
attaataaccaactctaaaaatgtcttagcgttttctatgaaaaattaaa
ggtgatataagaaataggagttggtcatttcctaacattttcttgattgt
cctatggaatctcatgtgaggtggccctaaatataatatcttttgcactt
gcccaggtaatctacagtgaagtaagttcggggtagagtgtgtcttctgt
acttcacaaacctcttcagatatttgtctgaaataacagcccatcacaca
atagaaaggtattcttatttgagaggaatttcagtttcattaaataaaaa
aaaagcccttcttaaaatcttgtggtctgagtttttgcctgtggtacaca
ctggtcttaaaagtggctcagttttattatatgtaaagaacaatcttcca
aagaaaataataaatatatttctaattttgtactcgtggaatcataccac
tggaaaaattatacaaaacccagggacaggtatccaaaaccagctgcaag
ttcagaacagtgggggtggcacttggcctacatgtttgtctgcagaatct
gaacttcgttaaatttattccttctaaattttgctagagacatccctgtt
ttgccaacctttctcttggagagagtcactaaatttctctttgtgagatg
tttttgtagggctgctctagagatatgagtatgatacggaaaaacggctt
ttattcattatctatatactatctatctctacagattttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58235503_58236609
seq2: B6Ng01-072B23.g_68_1157 (reverse)

seq1  GAAAATCTGGTTAGAGAATTAGATAAGTATATAGATAAATGAATAAAAAG  50
      |||||||||  ||||||  ||||| ||||||||||| |||||||||||  
seq2  GAAAATCTG--TAGAGA--TAGAT-AGTATATAGAT-AATGAATAAAA--  42

seq1  CCCTTTTTTCTGTATCAATTACTTCATATTCTCTAGAGCAGGCCTACAAA  100
       || |||||| ||||||  ||| ||||| |||||||||||| ||||||||
seq2  GCCGTTTTTCCGTATCA--TAC-TCATA-TCTCTAGAGCAGCCCTACAAA  88

seq1  AACAATCCTCAACAAAGAGAAATTTAAGTGACTCTCTCCAAGAGAAAGGT  150
      ||||   ||| |||||||||||||| ||||||||||||||||||||||||
seq2  AACA--TCTC-ACAAAGAGAAATTT-AGTGACTCTCTCCAAGAGAAAGGT  134

seq1  TGGCAAAAACAGGGATGTCTCTAGCAAAATTTAGAAGGAATAAATTTAAC  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGC-AAAACAGGGATGTCTCTAGCAAAATTTAGAAGGAATAAATTTAAC  183

seq1  GAAGTTCAGATTCTGCAGACAAACATGTAGGCCAAGTGCCACCCCCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTCAGATTCTGCAGACAAACATGTAGGCCAAGTGCCACCCCCACTG  233

seq1  TTCTGAACTTGCAGCTGGTTTTGGATACCTGTCCCTGGGTTTTGTATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAACTTGCAGCTGGTTTTGGATACCTGTCCCTGGGTTTTGTATAAT  283

seq1  TTTTCCAGTGGTATGATTCCACGAGTACAAAATTAGAAATATATTTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAGTGGTATGATTCCACGAGTACAAAATTAGAAATATATTTATTA  333

seq1  TTTTCTTTGGAAGATTGTTCTTTACATATAATAAAACTGAGCCACTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTGGAAGATTGTTCTTTACATATAATAAAACTGAGCCACTTTTA  383

seq1  AGACCAGTGTGTACCACAGGCAAAAACTCAGACCACAAGATTTTAAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGTGTGTACCACAGGCAAAAACTCAGACCACAAGATTTTAAGAAG  433

seq1  GGCTTTTTTTTTATTTAATGAAACTGAAATTCCTCTCAAATAAGAATACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTTTTTTATTTAATGAAACTGAAATTCCTCTCAAATAAGAATACC  483

seq1  TTTCTATTGTGTGATGGGCTGTTATTTCAGACAAATATCTGAAGAGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTGTGTGATGGGCTGTTATTTCAGACAAATATCTGAAGAGGTTT  533

seq1  GTGAAGTACAGAAGACACACTCTACCCCGAACTTACTTCACTGTAGATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTACAGAAGACACACTCTACCCCGAACTTACTTCACTGTAGATTA  583

seq1  CCTGGGCAAGTGCAAAAGATATTATATTTAGGGCCACCTCACATGAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCAAGTGCAAAAGATATTATATTTAGGGCCACCTCACATGAGATT  633

seq1  CCATAGGACAATCAAGAAAATGTTAGGAAATGACCAACTCCTATTTCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGGACAATCAAGAAAATGTTAGGAAATGACCAACTCCTATTTCTTA  683

seq1  TATCACCTTTAATTTTTCATAGAAAACGCTAAGACATTTTTAGAGTTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACCTTTAATTTTTCATAGAAAACGCTAAGACATTTTTAGAGTTGGT  733

seq1  TATTAATTAGGCAAATCCATATAAAAAATCCTGCTTAATAGTTTTTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTAGGCAAATCCATATAAAAAATCCTGCTTAATAGTTTTTTTTT  783

seq1  TCTTATTCTGTTAAACAAAGCATGTTCACTCAATGGTGTAAAGATTGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTCTGTTAAACAAAGCATGTTCACTCAATGGTGTAAAGATTGTAT  833

seq1  TTTAATTTTTCTTTTATAGGAAGACTCTACTTTTATATATATAATTCATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTTCTTTTATAGGAAGACTCTACTTTTATATATATAATTCATT  883

seq1  CACGAAAATAATTTGAAAGTCAAACACCTAAAAAATTTATTAGTATACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAAAATAATTTGAAAGTCAAACACCTAAAAAATTTATTAGTATACAT  933

seq1  ATGTAAAATAATACTAGTCGCATTCCCAGTAGCCACTACATGCCCTCCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAATAATACTAGTCGCATTCCCAGTAGCCACTACATGCCCTCCAA  983

seq1  TATAGTCTACTAAGATGGATGAGGAATTGGTATTCCCAGGTATCTGCCTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTCTACTAAGATGGATGAGGAATTGGTATTCCCAGGTATCTGCCTT  1033

seq1  ATTGAGGCTAAGACTGAAATGATAGTGGCATAGAGATTCCCTGTGGTCCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGGCTAAGACTGAAATGATAGTGGCATAGAGATTCCCTGTGGTCCT  1083

seq1  GGAATTC  1107
      |||||||
seq2  GGAATTC  1090