BAC Information

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BAC

Clone NameB6Ng01-074F01
Chromosome16 (Build37)
Map Location 61,295,036 - 61,439,517
singlet/doubletdoublet
Overlap geneLOC668183
Upstream geneEpha6, LOC100043804, EG668168, LOC668170, LOC100043524
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074F01.bB6Ng01-074F01.g
ACCDH891197DH891198
length3621,189
definitionDH891197|Mus musculus domesticus DNA, BAC clone: B6Ng01-074F01, 5' end.DH891198|Mus musculus domesticus DNA, BAC clone: B6Ng01-074F01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,439,150 - 61,439,517)(61,295,036 - 61,296,184)
sequence
agcaagatctattgttgcaaatatatacagtgtgtgtacttgttcatctt
aatatattaaaatacacacttctcccctttctttgtcacataatattact
gcatttcccactgtttcttgttattcatattactgtgctattagtttgtt
ttttctggtcctgaaagtacaatacttatttgtggtatctcttaagactg
ttcccatactctgaagttccacttacataatattaggaagtgtgaacttc
ttgcttgagcctcatatctccagaagggattctatggtctttttctactg
ttttacctccattctctctctctctctctctctctctctctctctctctc
tctctctctctc
gaattctcagctgcgtaaggggcatctgtatcaacacatcttactttcca
ggcttagaaaacatcacagaatagaaaggagaaagtttaagaggtatata
tttgagtactatgaaatactagccttgaggaatgatgtttgtgcacatgg
gctcaaatcaactgtggtctcctaagtaagacttttccaaagtcaaaata
ataaaattactaacattgacaatagagaagacacctacgctcctgttcta
gctattggcagcgaatctctgttgaaaaaggggtcactttctttggtggt
ttgttcattgattgttagcttatgccgatgagtccatattccatcagtct
gttaccatacagccagctagacttagatagactcagtgagtttaacaaat
atagaataaagccagagtacatgaagttcagagatatgttagaggtaatc
ccagagagagtttgagggaatgagtcgtggtggatacaaccaaattatag
tgaaaaatatgtatggaattgtcaaataaaaaataaaaactaagcatcag
tgttgctgccttttctatgcttaagagtaatacttgacaaacaaaaaaac
caaaccaaaccaaaataaatggacaaacaaacaaaaaagaaaaccccaaa
agccttgataaaatatttaactttttctattattcaatggaaatatatac
aagcatcaagaattttttagaaattgcatgtcaccaagtgaaacaattta
tacacagtgttcagcacttagtttaagcagcatgaaataacttaaagtct
tggtaatgtcagaacatagaagttgcccctttgacctgtcttgtcatgtg
agaagatcctccctccatcgccaagtctgatactcatttccacacacact
gcttcagcttttataaattgtaaagaaaaaaaaatcatcgatgtcacttt
tacctgtgtttattatgatacatgaaagctctgtgcaattttgtttagct
ctgaataatgtcagaaatttgtaatttaagtatctcattgaatattattt
ctgttaacaccagagtcatcgtataatgggatgttcagtaatcatcctct
attactgaatgcaaggccaagagaggtcagctattcatacctataatagg
tacattagcctccacaaatggagtattttcgcaatgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61439150_61439517
seq2: B6Ng01-074F01.b_46_413 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50

seq1  ATGGAGGTAAAACAGTAGAAAAAGACCATAGAATCCCTTCTGGAGATATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGTAAAACAGTAGAAAAAGACCATAGAATCCCTTCTGGAGATATG  100

seq1  AGGCTCAAGCAAGAAGTTCACACTTCCTAATATTATGTAAGTGGAACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAAGCAAGAAGTTCACACTTCCTAATATTATGTAAGTGGAACTTC  150

seq1  AGAGTATGGGAACAGTCTTAAGAGATACCACAAATAAGTATTGTACTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATGGGAACAGTCTTAAGAGATACCACAAATAAGTATTGTACTTTC  200

seq1  AGGACCAGAAAAAACAAACTAATAGCACAGTAATATGAATAACAAGAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAGAAAAAACAAACTAATAGCACAGTAATATGAATAACAAGAAAC  250

seq1  AGTGGGAAATGCAGTAATATTATGTGACAAAGAAAGGGGAGAAGTGTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAAATGCAGTAATATTATGTGACAAAGAAAGGGGAGAAGTGTGTA  300

seq1  TTTTAATATATTAAGATGAACAAGTACACACACTGTATATATTTGCAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATATATTAAGATGAACAAGTACACACACTGTATATATTTGCAACA  350

seq1  ATAGATCTTGCTGAATTC  368
      ||||||||||||||||||
seq2  ATAGATCTTGCTGAATTC  368

seq1: chr16_61295036_61296184
seq2: B6Ng01-074F01.g_108_1255

seq1  TACTTTCCAGGCTTAGAAAACATCACAGAATAGAAAGGAGAAAGTTTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCCAGGCTTAGAAAACATCACAGAATAGAAAGGAGAAAGTTTAAG  50

seq1  AGGTATATATTTGAGTACTATGAAATACTAGCCTTGAGGAATGATGTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATATATTTGAGTACTATGAAATACTAGCCTTGAGGAATGATGTTTG  100

seq1  TGCACATGGGCTCAAATCAACTGTGGTCTCCTAAGTAAGACTTTTCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATGGGCTCAAATCAACTGTGGTCTCCTAAGTAAGACTTTTCCAAA  150

seq1  GTCAAAATAATAAAATTACTAACATTGACAATAGAGAAGACACCTACGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAATAATAAAATTACTAACATTGACAATAGAGAAGACACCTACGCT  200

seq1  CCTGTTCTAGCTATTGGCAGCGAATCTCTGTTGAAAAAGGGGTCACTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCTAGCTATTGGCAGCGAATCTCTGTTGAAAAAGGGGTCACTTTC  250

seq1  TTTGGTGGTTTGTTCATTGATTGTTAGCTTATGCCGATGAGTCCATATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGGTTTGTTCATTGATTGTTAGCTTATGCCGATGAGTCCATATTC  300

seq1  CATCAGTCTGTTACCATACAGCCAGCTAGACTTAGATAGACTCAGTGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTCTGTTACCATACAGCCAGCTAGACTTAGATAGACTCAGTGAGT  350

seq1  TTAACAAATATAGAATAAAGCCAGAGTACATGAAGTTCAGAGATATGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAATATAGAATAAAGCCAGAGTACATGAAGTTCAGAGATATGTTA  400

seq1  GAGGTAATCCCAGAGAGAGTTTGAGGGAATGAGTCGTGGTGGATACAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAATCCCAGAGAGAGTTTGAGGGAATGAGTCGTGGTGGATACAACC  450

seq1  AAATTATAGTGAAAAATATGTATGGAATTGTCAAATAAAAAATAAAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATAGTGAAAAATATGTATGGAATTGTCAAATAAAAAATAAAAACT  500

seq1  AAGCATCAGTGTTGCTGCCTTTTCTATGCTTAAGAGTAATACTTGACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCAGTGTTGCTGCCTTTTCTATGCTTAAGAGTAATACTTGACAAA  550

seq1  CAAAAAAACCAAACCAAACCAAAATAAATGGACAAACAAACAAAAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAACCAAACCAAACCAAAATAAATGGACAAACAAACAAAAAAGAA  600

seq1  AACCCCAAAAGCCTTGATAAAATATTTAACTTTTTCTATTATTCAATGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAAAAGCCTTGATAAAATATTTAACTTTTTCTATTATTCAATGGA  650

seq1  AATATATACAAGCATCAAGAATTTTTTAGAAATTGCATGTCACCAAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATACAAGCATCAAGAATTTTTTAGAAATTGCATGTCACCAAGTGA  700

seq1  AACAATTTATACACAGTGTTCAGCACTTAGTTTAAGCAGCATGAAATAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTTATACACAGTGTTCAGCACTTAGTTTAAGCAGCATGAAATAAC  750

seq1  TTAAAGTCTTGGTAATGTCAGAACATAGAAGTTGCCCCTTTGACCTGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTCTTGGTAATGTCAGAACATAGAAGTTGCCCCTTTGACCTGTCT  800

seq1  TGTCATGTGAGAAGATCCTCCCTCCATCGCCAAGTCTGATACTCATTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGTGAGAAGATCCTCCCTCCATCGCCAAGTCTGATACTCATTTCC  850

seq1  ACACACACTGCTTCAGCTTTTATAAATTGTAAAGAAAAAAAAATCATCGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACTGCTTCAGCTTTTATAAATTGTAAAGAAAAAAAAATCATCGA  900

seq1  TGTCACTTTTACCTGTGTTTATTATGATACATGAAAGCTCTGTGCAATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTTTTACCTGTGTTTATTATGATACATGAAAGCTCTGTGCAATTT  950

seq1  TTGTTTTAGCTCTGAATAATGTCAGAAATTTGTAATTTAAGTATCTCATT  1000
      |   ||||||||||||||||||||||||||||||||||||||||||||||
seq2  T--GTTTAGCTCTGAATAATGTCAGAAATTTGTAATTTAAGTATCTCATT  998

seq1  G-ATATTATTTCTGTTAACA-CAGAGTCATCGTATAAATGGGATG-TCAG  1047
      | |||||||||||||||||| |||||||||||||| ||||||||| ||||
seq2  GAATATTATTTCTGTTAACACCAGAGTCATCGTAT-AATGGGATGTTCAG  1047

seq1  TAATCAT-CTCTATTACTGAATGCCAGGCAAAGAGA-GTCAGCTATTCAT  1095
      ||||||| |||||||||||||||| |||| |||||| |||||||||||||
seq2  TAATCATCCTCTATTACTGAATGCAAGGCCAAGAGAGGTCAGCTATTCAT  1097

seq1  ACCTATAATTTAGTGTTACATTAG-CTCAACAAATGGAGTAATTTTCTC-  1143
      |||||||||     | |||||||| ||| ||||||||||| |||||| | 
seq2  ACCTATAAT----AGGTACATTAGCCTCCACAAATGGAGT-ATTTTCGCA  1142

seq1  ATGAAA  1149
      ||||||
seq2  ATGAAA  1148