BAC Information

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BAC

Clone NameB6Ng01-074G21
Chromosome16 (Build37)
Map Location 3,138,761 - 3,139,638
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042177
Downstream geneLOC100042915, LOC100042188, LOC100042251, LOC100042925, LOC100042270, LOC100042937, LOC100042283, Olfr161, Olfr162-ps1, Olfr163-ps1, LOC100042949, Mefv, EG620395, Zfp263, Olfr15, Zfp174, Zfp597, 1200013P24Rik, 1700037C18Rik, Cluap1, LOC664851, Nlrc3, Btbd12, Dnase1, Trap1, Crebbp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074G21.bB6Ng01-074G21.g
ACCDH891281DH891282
length858208
definitionDH891281|Mus musculus domesticus DNA, BAC clone: B6Ng01-074G21, 5' end.DH891282|Mus musculus domesticus DNA, BAC clone: B6Ng01-074G21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatttgaaatttatttttcaattgaggcatctgaaatgttggct
ctatcagctgacagggaaatgaaacatgcactgtaggctaaagttaccct
ggccaaaaaccattctgctcatgttcaagaacatttagaaaaccgctgtg
atagtataggacagtacattcattcaaaatgccccataaatgagtatgtc
ttcaggcaagaacgaaaatactgttatccttgtggactgaggcagaacca
caaagggaaagagaagaaggtagagaaaggagaaaaggacatggggtagg
aatcttgaaaacagggccatgagggctggccagttggagtaagagcagcc
tagataaatatgacaagctatattgtgggattattggcagagaagtggac
attgttatatatctgcccagctctagtgtggattaaaccttcttatgaat
ataaaagttttgtcttttatctggaaactgaataatcaaagaaggtgtag
aaccccccaactgatgattaaatatttactacaacacaccctggttagtc
agaagatcattatacactagtgctttttcccaaggggctggccactgcac
ataaaagcctcaagtcaaggtttttacagagacttagcctctccaccctg
ctgtgatgttttgccttggctagagagatggggagcagcagtctgcctct
acttctgcaaaacaaaaggttttgttttggtttttgcaccctgggatgtc
ttgaggctctgttttacaataaacatagtcttcagctcagattgtagggc
gggcagacaccaaactgatcagtcctcttgaacaggcagggcaagatcaa
cagactct
acagggaaatcatcactcagggacttcaggcagaaaactagccagtcagc
ctctggatagacaaggctcaacagttcagagaaccaggccatcgcaaata
gttcacagacctgcaaggaagacatgcagatccctgccccccaccccacc
cctcccccagccccacccaaacatagggagaaaaggcagtgtgggggagg
gggaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_3138761_3139638
seq2: B6Ng01-074G21.b_45_901 (reverse)

seq1  AGAGTCTGTTGATCTTGCCCTGCCTGTTCAAGAGGGCTGATCAGTTTGGT  50
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGAGTCTGTTGATCTTGCCCTGCCTGTTCAAGAGGACTGATCAGTTTGGT  50

seq1  GTCTGCCCGCCCTACAATCTGAGCTGAAGACCATGTTTATTGTAAAACAG  100
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTCTGCCCGCCCTACAATCTGAGCTGAAGACTATGTTTATTGTAAAACAG  100

seq1  AGCCTCAAGACATCCCAGGGTGGAAAAACCAGAACAAAACCTTTTGTTTT  150
      |||||||||||||||||||||| |||||||| ||||||||||||||||||
seq2  AGCCTCAAGACATCCCAGGGTGCAAAAACCAAAACAAAACCTTTTGTTTT  150

seq1  GCAGAATTAGAGGCAGACTGCTGCTCCTCATCTCTCTAGCCAAGGCAAAA  200
      |||||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  GCAGAAGTAGAGGCAGACTGCTGCTCCCCATCTCTCTAGCCAAGGCAAAA  200

seq1  CATCACAGCAGGGTGGAGAGGCTAAGTCTCTGTAAAAACCTTGACTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAGCAGGGTGGAGAGGCTAAGTCTCTGTAAAAACCTTGACTTGAG  250

seq1  GCTTTTATATGCAGTGGCCAGCCCCTTGGGAAAATGCACTAGTGTATAAT  300
      |||||||| ||||||||||||||||||||||||| |||||||||||||||
seq2  GCTTTTATGTGCAGTGGCCAGCCCCTTGGGAAAAAGCACTAGTGTATAAT  300

seq1  GATCTTCTGACTAACCAGGGCCATGAGCATCAAATGCAGTGTGTGTTGTA  350
      |||||||||||||||||||                     ||||||||||
seq2  GATCTTCTGACTAACCAGG---------------------GTGTGTTGTA  329

seq1  GTAAATATTTAATCATCAGTTGGGGGTTTCTACACCTTCTTTGATTATTC  400
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTAAATATTTAATCATCAGTTGGGGGGTTCTACACCTTCTTTGATTATTC  379

seq1  AGTTTCCAGATAAAAGACAAAACTTTTATATTCATAAGAAGGTTTAATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCAGATAAAAGACAAAACTTTTATATTCATAAGAAGGTTTAATCC  429

seq1  ACACTAGAGCTGGGCAGATATATAACAATGTCCACTTCTCTGCCAATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGAGCTGGGCAGATATATAACAATGTCCACTTCTCTGCCAATAAT  479

seq1  CCCACAATATGTCTTGTCATATTCATCTAGGCTGCTCTTACTCCAACTGG  550
      ||||||||||  ||||||||||| ||||||||||||||||||||||||||
seq2  CCCACAATATAGCTTGTCATATTTATCTAGGCTGCTCTTACTCCAACTGG  529

seq1  CCAGCCCTCATGGCCCTGTTTTCAATATTCCTACCCCATATCCTTTTCTC  600
      ||||||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  CCAGCCCTCATGGCCCTGTTTTCAAGATTCCTACCCCATGTCCTTTTCTC  579

seq1  CTCTCTCTACCTTCTTCTCTTTCCCCTTGTGGTTCTTCCTCAGTCCACAA  650
      || |||||||||||||||||||||| |||||||||| |||||||||||||
seq2  CTTTCTCTACCTTCTTCTCTTTCCCTTTGTGGTTCTGCCTCAGTCCACAA  629

seq1  GGATAACAATATTTTCATTCTTGCCTGAAGACATACTCATTTATGGAGCA  700
      |||||||| ||||||| ||||||||||||||||||||||||||||| |||
seq2  GGATAACAGTATTTTCGTTCTTGCCTGAAGACATACTCATTTATGGGGCA  679

seq1  TTTTGAATGAGTGTACTGTCCTATACTATCACAGCGGTTTTCTAAATGTT  750
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATGAATGTACTGTCCTATACTATCACAGCGGTTTTCTAAATGTT  729

seq1  GTTGAACATGAGCAGAATGGTTTTTGGCCAGGGTAACTTTAGCCTACAGT  800
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACATGAGCAGAATGGTTTTTGGCCAGGGTAACTTTAGCCTACAGT  779

seq1  GCATGTTTCATTTCCCTGTCAGCTGATAGAGCCAACATTTCAGATGCCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTTCATTTCCCTGTCAGCTGATAGAGCCAACATTTCAGATGCCTC  829

seq1  AATTGAAAAATGAATTTCAGATTGAATT  878
      ||||||||||| ||||||| ||||||||
seq2  AATTGAAAAATAAATTTCAAATTGAATT  857