BAC Information

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BAC

Clone NameB6Ng01-074L15
Chromosome16 (Build37)
Map Location 14,783,516 - 14,864,852
singlet/doubletdoublet
Overlap genenone
Upstream geneRrn3, Ntan1, Pdxdc1, Mpv17l, Ifitm7, 2900011O08Rik, 4921513D23Rik, Nde1, Myh11, 0610037P05Rik, Abcc1, Gm1758, Snai2
Downstream geneEfcab1, LOC100042737, LOC665653, LOC385748, LOC100042743, LOC547302, EG632352, Ube2v2, LOC665682, Mcm4, Prkdc, 2410018G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074L15.bB6Ng01-074L15.g
ACCDH891490DH891491
length6821,170
definitionDH891490|Mus musculus domesticus DNA, BAC clone: B6Ng01-074L15, 5' end.DH891491|Mus musculus domesticus DNA, BAC clone: B6Ng01-074L15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,864,171 - 14,864,852)(14,783,516 - 14,784,693)
sequence
gaattctatcaagtcctactaactgaaaaaaaaggtagcaacaatccata
catctgttttcatggccatgaaggaattaactttttaagttccatttaca
aagctaacattgccatcttgatatgaaaactagaaaaatacaggacaaag
aaacaaaggacagataacacagagaatatgttctgcttgctctaaaacct
aatatttgagtcatctcagatgatttagttttatgtacactgagggcgct
gacatcagcgttgctgactggctacagcctaagagggttttcttacttag
ctcctacttctggttgtttttctaaatggtctttgctctcttgactacac
atttttgtatcactacttgtgataagcttgggtaagtcacattattccct
cagaatctgtttcctcatctgttcaatttaaggcagtatcaatctcctga
ggagactgttacaggaattaaattaaattaaattcacatgaaaagtattc
tgtgtgaatacttgcaagtcaccctcatgaggacatttattaaatataaa
taatctttaaaataatctttaaataatctttaattgtctactttgctgtt
tattgatgattttgttcacattcacttctccataggatgagaggtttgtg
atagatactatttgatgagagggagagagaaa
gaattccatgtatattcacatctcatgtttattgctgttgtgtttactat
ggcaaataattgaagtaagcctacttgaatatcaataaataatgaataat
gaaaattatatatatcctaatatacagtcatatccatatgcatatatatt
tatgactatgtactggaatttatatgaacacttatgtatttaaatactac
aaaactataaaccaacataaaattaaagttttgcagaaaattggtggatt
ttgaatgtataatattaagcaagtccacatagtctcagaataaaaagaac
atgcttcctctcatacacagaatacagccaatgaagcattctaaaaataa
atgtgcacatggctatagtataccatatagaaagaataacaagaagcact
aaatattaggagttagaaaggaataaaagcaggtaatagacatgagttat
gaaaaacaatttaaagctagttgtttttctaattctaattctgtcatggg
ctttcatttttttggtggattagtgcagaaaatacatctgatagtgaaag
agtggctattctacctttatacaagtacattttgtatttttagtttattt
aatcacgatgtgagtttcattttatttataatattggttttttccatttt
tattaggtatttagctcatttacatttccaatgctataccaaatgtcccc
catacgcaccccccactcccctaaaacctttatttactatgtctgtagct
ttctgcttacatatatgcctcaacaccagaagaggcaccagatttcatta
cagatggttgtgagctaccatgtggttgctgggagttgaactcaggacct
ctggtagagcagccagtgctcttaaccgctgagccatctctccagcccta
taatattgttttaacaataaagtttttaaaatgtaaggaaactatatagc
aataatgataagaattttttattgttagctttgagttggtatgcacttat
aaaaatataaagacagctctgggctacactgactcagctttaccatagtc
agcattatgcacagttatagctgtatgacattagcaggttacaaagctga
caaaccatgtacatgacaggttccatctccacgaagaaattgctcgtact
ggcttgggtctaattctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_14864171_14864852
seq2: B6Ng01-074L15.b_46_727 (reverse)

seq1  TTTCTCTCTCCCTCTCATCAAATAGTATCTATCACAAACCTCTCATCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCTCCCTCTCATCAAATAGTATCTATCACAAACCTCTCATCCTA  50

seq1  TGGAGAAGTGAATGTGAACAAAATCATCAATAAACAGCAAAGTAGACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAGTGAATGTGAACAAAATCATCAATAAACAGCAAAGTAGACAAT  100

seq1  TAAAGATTATTTAAAGATTATTTTAAAGATTATTTATATTTAATAAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATTATTTAAAGATTATTTTAAAGATTATTTATATTTAATAAATGT  150

seq1  CCTCATGAGGGTGACTTGCAAGTATTCACACAGAATACTTTTCATGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGAGGGTGACTTGCAAGTATTCACACAGAATACTTTTCATGTGAA  200

seq1  TTTAATTTAATTTAATTCCTGTAACAGTCTCCTCAGGAGATTGATACTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTAATTTAATTCCTGTAACAGTCTCCTCAGGAGATTGATACTGC  250

seq1  CTTAAATTGAACAGATGAGGAAACAGATTCTGAGGGAATAATGTGACTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATTGAACAGATGAGGAAACAGATTCTGAGGGAATAATGTGACTTA  300

seq1  CCCAAGCTTATCACAAGTAGTGATACAAAAATGTGTAGTCAAGAGAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGCTTATCACAAGTAGTGATACAAAAATGTGTAGTCAAGAGAGCAA  350

seq1  AGACCATTTAGAAAAACAACCAGAAGTAGGAGCTAAGTAAGAAAACCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATTTAGAAAAACAACCAGAAGTAGGAGCTAAGTAAGAAAACCCTC  400

seq1  TTAGGCTGTAGCCAGTCAGCAACGCTGATGTCAGCGCCCTCAGTGTACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTGTAGCCAGTCAGCAACGCTGATGTCAGCGCCCTCAGTGTACAT  450

seq1  AAAACTAAATCATCTGAGATGACTCAAATATTAGGTTTTAGAGCAAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAAATCATCTGAGATGACTCAAATATTAGGTTTTAGAGCAAGCAG  500

seq1  AACATATTCTCTGTGTTATCTGTCCTTTGTTTCTTTGTCCTGTATTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTCTCTGTGTTATCTGTCCTTTGTTTCTTTGTCCTGTATTTTTC  550

seq1  TAGTTTTCATATCAAGATGGCAATGTTAGCTTTGTAAATGGAACTTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTCATATCAAGATGGCAATGTTAGCTTTGTAAATGGAACTTAAAA  600

seq1  AGTTAATTCCTTCATGGCCATGAAAACAGATGTATGGATTGTTGCTACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATTCCTTCATGGCCATGAAAACAGATGTATGGATTGTTGCTACCT  650

seq1  TTTTTTTCAGTTAGTAGGACTTGATAGAATTC  682
      ||||||||||||||||||||||||||||||||
seq2  TTTTTTTCAGTTAGTAGGACTTGATAGAATTC  682

seq1: chr16_14783516_14784693
seq2: B6Ng01-074L15.g_70_1239

seq1  GAATTCCATGTATATTCACATCTCATGTTTATTGCTGTTGTGTTTACTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTATATTCACATCTCATGTTTATTGCTGTTGTGTTTACTAT  50

seq1  GGCAAATAATTGAAGTAAGCCTACTTGAATATCAATAAATAATGAATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATAATTGAAGTAAGCCTACTTGAATATCAATAAATAATGAATAAT  100

seq1  GAAAATTATATATATCCTAATATACAGTCATATCCATATGCATATATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTATATATATCCTAATATACAGTCATATCCATATGCATATATATT  150

seq1  TATGACTATGTACTGGAATTTATATGAACACTTATGTATTTAAATACTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTATGTACTGGAATTTATATGAACACTTATGTATTTAAATACTAC  200

seq1  AAAACTATAAACCAACATAAAATTAAAGTTTTGCAGAAAATTGGTGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTATAAACCAACATAAAATTAAAGTTTTGCAGAAAATTGGTGGATT  250

seq1  TTGAATGTATAATATTAAGCAAGTCCACATAGTCTCAGAATAAAAAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGTATAATATTAAGCAAGTCCACATAGTCTCAGAATAAAAAGAAC  300

seq1  ATGCTTCCTCTCATACACAGAATACAGCCAATGAAGCATTCTAAAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCCTCTCATACACAGAATACAGCCAATGAAGCATTCTAAAAATAA  350

seq1  ATGTGCACATGGCTATAGTATACCATATAGAAAGAATAACAAGAAGCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCACATGGCTATAGTATACCATATAGAAAGAATAACAAGAAGCACT  400

seq1  AAATATTAGGAGTTAGAAAGGAATAAAAGCAGGTAATAGACATGAGTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAGGAGTTAGAAAGGAATAAAAGCAGGTAATAGACATGAGTTAT  450

seq1  GAAAAACAATTTAAAGCTAGTTGTTTTTCTAATTCTAATTCTGTCATGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACAATTTAAAGCTAGTTGTTTTTCTAATTCTAATTCTGTCATGGG  500

seq1  CTTTCATTTTTTTGGTGGATTAGTGCAGAAAATACATCTGATAGTGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATTTTTTTGGTGGATTAGTGCAGAAAATACATCTGATAGTGAAAG  550

seq1  AGTGGCTATTCTACCTTTATACAAGTACATTTTGTATTTTTAGTTTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTATTCTACCTTTATACAAGTACATTTTGTATTTTTAGTTTATTT  600

seq1  AATCACGATGTGAGTTTCATTTTATTTATAATATTGGTTTTTTCCATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACGATGTGAGTTTCATTTTATTTATAATATTGGTTTTTTCCATTTT  650

seq1  TATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAATGTCCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAATGTCCCC  700

seq1  CATACGCACCCCCCACTCCCCTAAAACCTTTATTTACTATGTCTGTAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACGCACCCCCCACTCCCCTAAAACCTTTATTTACTATGTCTGTAGCT  750

seq1  TTCTGCTTACATATATGCCTCAACACCAGAAGAGGCACCAGATTTCATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTACATATATGCCTCAACACCAGAAGAGGCACCAGATTTCATTA  800

seq1  CAGATGGTTGTGAGCTACCATGTGGTTGCTGGGAGTTGAACTCAGGACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGTTGTGAGCTACCATGTGGTTGCTGGGAGTTGAACTCAGGACCT  850

seq1  CTGGTAGAGCAGCCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAGAGCAGCCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTA  900

seq1  TAATATTGTTTTAACAATAAAGTTTTTAAAATGTAAGGAAACTATAATAG  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAATATTGTTTTAACAATAAAGTTTTTAAAATGTAAGGAAACTAT-ATAG  949

seq1  CAATAAATGATAAGAATTTTTTATTGTTAGCTTTGAGTTGGTATGCACTT  1000
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAT-AATGATAAGAATTTTTTATTGTTAGCTTTGAGTTGGTATGCACTT  998

seq1  ATAAAAATAATACAGACAGCTCTGGGCTAACACTGACTCAGCTTTACCCA  1050
      |||||||| ||| ||||||||||||||| ||||||||||||||||| |||
seq2  ATAAAAAT-ATAAAGACAGCTCTGGGCT-ACACTGACTCAGCTTTA-CCA  1045

seq1  TAGTCAGCATTATGCACAGTTATAGCTGTATGACATAAGCAGGGTACCAA  1100
      |||||||||||||||||||||||||||||||||||| |||||| || |||
seq2  TAGTCAGCATTATGCACAGTTATAGCTGTATGACATTAGCAGGTTA-CAA  1094

seq1  AGCTGACAAACCAATGTACATGACA-GTTCCATCTCCACGAAGAATATGC  1149
      |||||||||||| |||||||||||| ||||||||||||||||||| ||  
seq2  AGCTGACAAACC-ATGTACATGACAGGTTCCATCTCCACGAAGAA-ATTG  1142

seq1  CTCGTACTGCTTTGTGTCTATATTCTCTC  1178
      |||||||||  ||| ||||| ||||||||
seq2  CTCGTACTGGCTTGGGTCTA-ATTCTCTC  1170