BAC Information

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BAC

Clone NameB6Ng01-074L19
Chromosome16 (Build37)
Map Location 68,477,694 - 68,478,811
singlet/doubletsinglet
Overlap genenone
Upstream geneCadm2
Downstream geneEG626609
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074L19.bB6Ng01-074L19.g
ACCDH891498DH891499
length1,1561,110
definitionDH891498|Mus musculus domesticus DNA, BAC clone: B6Ng01-074L19, 5' end.DH891499|Mus musculus domesticus DNA, BAC clone: B6Ng01-074L19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctatttagcattgttcatcattttaatagggttctttggttct
ttgacatctaactttttgcattctttatatatacattggctatacaaaga
actctgtgagatgtgagattgataaagatctttccccaacctcttggttg
ccattttgtcctattgacagggtcctttgccttatagaaactttccaatt
ttatgaggttccatttgtcaattcttgatcttagagcataagccattggt
gttctgttcaagaacttttcccctgtgtgcatgtttgatatatttcccca
ctttcaattttattgaatttagtgtctctggttttatgtggaggtccttg
atacaaagcattgagctttgtataaagagataagaatgaatcaatttgca
ttcttctacaagttgactgctagttgaatcagcaccatttgttgaaaatg
cactttttccactggatggttttagatcctttgtcaaagatcaagtgaac
ataaatgtgtgggttcatttctgggtcttcaattctattccattgatcta
catccctgtcattgtaccaataccatgcagttttttgtttgtttgtttgt
tgttgtttttgtttgttttttgtttgtgtgtttgtttgtttttcgagaca
aggtttctctgtgtagccctggctgccctggactcactctgtagaccatg
ctggcctcgaactcaaaaatccacctgcctctgcctccagagtgctggga
ttaaaggcatgctccaccactgctaggcaaccatgcagttttttatcatg
attgctctgtagtacagctttaggtcacgggttgtgtttacaccagaggt
tcttttatttttgagaatagtttttgctatcctgggtgtactggctagtt
ttgtgtcaacctgacacagctagagttatcacagagaaagggagcttcaa
ctgaggaaatgcctccatgagatacaactgtaaagcattttctcaattag
ttgatcaaaggggaaaggccccttgtgggtggggatcatctttggctggt
aagtcttggtctatagagagcagctgatcaagccagtggaagccagtcag
taagaacatccctccatgtctctgccacagctcctgtttctcccacctgt
tgagga
gaattcatagttatctgaaatatgtaatgactacttatattctatgaact
cactcatgcaatagtatcaattaactttctcatccatatctttttgtata
aattatttgcttatgcttgataagtgttcatttatgattctattcattat
taaatgtttctcctgtgaattggcattaatatttaatgtaagtcaagttt
gtcctttatgaaaatgatccacaaatgtctcttacccaaaataagctata
atatgcttctcctgagacaaagaaatttattttaagaatattcttctaga
aggatgtgtgaagaaagatcacatactagaaaagacagaaaaaaaaaata
cagaatgggcattttcttttctctgccaattcttccaactaaaagggaaa
caagataatgagtttcaaaaaagaaccaaaaaacaaaacaaaaaacaaaa
taaaaaaaacaaagcaaaaaaaaacaaagcaaaaaaacagaaaccctctc
agatgctacctataacttcaaagactcgtaaatgcaataaaaaaacccag
aaatactgatttgaaaaaaaaaaacacacacaccaaaattaatcagtcaa
ctaatttttgcttaaggtacacaatattcatagcactttggtaaggtata
tattatataataaaaaatggagttactagaaatatgtgcatgttatttat
taaataccaatacgatagcagttataaattctaagtacattttacaaatg
atgacttctggcattgtcttcagcaatggatttactactgcagttatttc
tccaagaatactatgaaagaatgctagtagaagagtaaaaccacagcatt
ctaactccttccagttaatgtacatacagataaaagggaaaacaaagata
tacaggaaaaaggaaatagcctagaataatgcctctagagacttcaaaaa
tttctcatttttgaaggtacattctagaaggctagaacttggttcttaaa
tttattctggagggaaatggtgtaacatatgtgaaataaaaatactgtta
acctttaaatctcatagcaaatatggtaatgtgggtgatttgtagtgaat
gactttgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_68477694_68478811
seq2: B6Ng01-074L19.g_68_1177 (reverse)

seq1  TATCAAAGTCATTCACTTAACAAATTCACCACATTTACCCATATTTGCTA  50
      |||||||||||||||||  ||||||   |||||||   ||||||||||||
seq2  TATCAAAGTCATTCACT--ACAAATCACCCACATT--ACCATATTTGCTA  46

seq1  TGAGGATTTTAAGGTT-ACAGTATTTTTATTTCAACATATGTTACACATT  99
      ||| ||||| |||||| |||||||||||||||| |||||||||||||  |
seq2  TGA-GATTTAAAGGTTAACAGTATTTTTATTTC-ACATATGTTACACCAT  94

seq1  TTCCCTCAAGATAAATTTTAAGAACCAAGTTCTTGGCTTCTAAGAATGGT  149
      ||||||| |||  || ||||||||||||||||| | ||||| ||||| ||
seq2  TTCCCTCCAGAATAAATTTAAGAACCAAGTTCTAGCCTTCT-AGAAT-GT  142

seq1  ACCTTCAAAAATGAGAAATTTTTTGAAGTCTCTAGAGGCATTATTCTAGG  199
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACCTTCAAAAATGAGAAA-TTTTTGAAGTCTCTAGAGGCATTATTCTAGG  191

seq1  CTATTTCCTTTTTCCTGTATATCTTTGTTTTCCCTTTTATCTGTATGTAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCCTTTTTCCTGTATATCTTTGTTTTCCCTTTTATCTGTATGTAC  241

seq1  ATTAACTGGAAGGAGTTAGAATGCTGTGGTTTTACTCTTCTACTAGCATT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTGGAAGGAGTTAGAATGCTGTGGTTTTACTCTTCTACTAGCATT  291

seq1  CTTTCATAGTATTCTTGGAGAAATAACTGCAGTAGTAAATCCATTGCTGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATAGTATTCTTGGAGAAATAACTGCAGTAGTAAATCCATTGCTGA  341

seq1  AGACAATGCCAGAAGTCATCATTTGTAAAATGTACTTAGAATTTATAACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATGCCAGAAGTCATCATTTGTAAAATGTACTTAGAATTTATAACT  391

seq1  GCTATCGTATTGGTATTTAATAAATAACATGCACATATTTCTAGTAACTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCGTATTGGTATTTAATAAATAACATGCACATATTTCTAGTAACTC  441

seq1  CATTTTTTATTATATAATATATACCTTACCAAAGTGCTATGAATATTGTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTATTATATAATATATACCTTACCAAAGTGCTATGAATATTGTG  491

seq1  TACCTTAAGCAAAAATTAGTTGACTGATTAATTTTGGTGTGTGTGTTTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTAAGCAAAAATTAGTTGACTGATTAATTTTGGTGTGTGTGTTTTT  541

seq1  TTTTTTCAAATCAGTATTTCTGGGTTTTTTTATTGCATTTACGAGTCTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAAATCAGTATTTCTGGGTTTTTTTATTGCATTTACGAGTCTTT  591

seq1  GAAGTTATAGGTAGCATCTGAGAGGGTTTCTGTTTTTTTGCTTTGTTTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTATAGGTAGCATCTGAGAGGGTTTCTGTTTTTTTGCTTTGTTTTT  641

seq1  TTTTGCTTTGTTTTTTTTATTTTGTTTTTTGTTTTGTTTTTTGGTTCTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTTGTTTTTTTTATTTTGTTTTTTGTTTTGTTTTTTGGTTCTTT  691

seq1  TTTGAAACTCATTATCTTGTTTCCCTTTTAGTTGGAAGAATTGGCAGAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAACTCATTATCTTGTTTCCCTTTTAGTTGGAAGAATTGGCAGAGA  741

seq1  AAAGAAAATGCCCATTCTGTATTTTTTTTTTCTGTCTTTTCTAGTATGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATGCCCATTCTGTATTTTTTTTTTCTGTCTTTTCTAGTATGTG  791

seq1  ATCTTTCTTCACACATCCTTCTAGAAGAATATTCTTAAAATAAATTTCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTTCACACATCCTTCTAGAAGAATATTCTTAAAATAAATTTCTT  841

seq1  TGTCTCAGGAGAAGCATATTATAGCTTATTTTGGGTAAGAGACATTTGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAGGAGAAGCATATTATAGCTTATTTTGGGTAAGAGACATTTGTG  891

seq1  GATCATTTTCATAAAGGACAAACTTGACTTACATTAAATATTAATGCCAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTTTCATAAAGGACAAACTTGACTTACATTAAATATTAATGCCAA  941

seq1  TTCACAGGAGAAACATTTAATAATGAATAGAATCATAAATGAACACTTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGGAGAAACATTTAATAATGAATAGAATCATAAATGAACACTTAT  991

seq1  CAAGCATAAGCAAATAATTTATACAAAAAGATATGGATGAGAAAGTTAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATAAGCAAATAATTTATACAAAAAGATATGGATGAGAAAGTTAAT  1041

seq1  TGATACTATTGCATGAGTGAGTTCATAGAATATAAGTAGTCATTACATAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTATTGCATGAGTGAGTTCATAGAATATAAGTAGTCATTACATAT  1091

seq1  TTCAGATAACTATGAATTC  1118
      |||||||||||||||||||
seq2  TTCAGATAACTATGAATTC  1110