BAC Information

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BAC

Clone NameB6Ng01-074N15
Chromosome16 (Build37)
Map Location 80,681,351 - 80,830,263
singlet/doubletdoublet
Overlap geneLOC621365
Upstream geneEG383172, 1700066C05Rik
Downstream geneLOC100039724, Ncam2, LOC621470
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074N15.bB6Ng01-074N15.g
ACCDH891586DH891587
length1,0931,072
definitionDH891586|Mus musculus domesticus DNA, BAC clone: B6Ng01-074N15, 5' end.DH891587|Mus musculus domesticus DNA, BAC clone: B6Ng01-074N15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,829,156 - 80,830,263)(80,681,351 - 80,682,421)
sequence
gaattcagaataaagaatcattttagtcagacctttagatgctcaaagat
agaattatatttccaatctgcaatagcattatagcaatcttgtatcattt
atgacaagtagctgacatgtggtatttattgttgtaaaaatccactttga
aaaagcatcattatttaaataacagcattcattttgacagcatttttcat
agaatttttctgttcaggcgtagagttagaagttataacaacgtgttttg
tggaattagcaaacctggattttgccatggaatattaatattaactaaga
caatttcactgattgactaaaacaaaaactaagggaaggatttgtgatga
ggtaaagagtaagaaaatcaactatctatggatatggtttgagacaggta
ggaatttttttttttggccaggcattggaaaggtagtcacccttggaaag
tatcagcttcctgaaaacttataactaagttagattcccatcaacctgtt
ttgtattagtcaggcaaaacaaactgtagaaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaagaagaagaagaagaaaagcctt
tatacatatccagatacatacaggcttttctatctttaaaagtgtgagca
gattcaacagaaatgccttcctagtgctcacagtgccaagggaatactta
ccaagaaagagatctccttgctcagctggaccattcctgactctggatgt
tgcatactgaattgagtaatggatttttgatggagaaatcagacagtgtg
actttagatatttccagtaactcaaatagttatcccccaatttttagcag
agggcattgctacaggaacactatttttttctctagatataaacagaggg
gtgtgttatgatacagtacagaattcatcccttgtggccatgatctgagg
gaatgactatttatcatagatttctcatatcttttactttctctagtgcc
ctggagtttagattctcaatcataagatctccccatgctctga
gaattctttataaaagctgcatctctctctttaggaagtgtcaatggaaa
taatcaaagtaaacatactttattttcctgatttcttttccatatgtcgc
tttcccttttttttttttttttaaacaattcagtcctgtccttttgaaag
acttgtttataatttaaaaccttcaagtcattaaaaatttaatggctcag
tggttaagacagacaagttcttggagctcacctggatttgttttcaagct
gaaagtgtctgtcccagttgtaacacaggtgtagtgtaaagacatcagtg
gtgacatgctctcaactccacttttaaatcactgctgtcaccactatatt
tataaagtgaattctggaagtttcccacagaggaggaggccacattgata
gacagggagaagaaacttgttcaaaggtgcataacaaaatctacttaaaa
gaatcatttgaacaaattctttcattgcttaacttaacagaaagacttgc
tgaaagtttgtctataagtataattctcaagaagctttgacataacctta
tctttaacaattggtattacaatttactgaaaactatttctgtttcatat
attttatgtaaatatagtataatgtattatatgtatttactatatttata
aaatatattatttttgtttacatacatgacaatttctttaaaactaatgt
aatctttataggatacattatctcccttcttcacgtttaaactgaataat
tttaaattttcagatcagtgtaaattagaagtgcatagatatataaatta
agtgttattttttcttgagctattttatgttaactatggtatatggatgc
aactacagaagacatcaagtgactcttttttaatttctacaatgaatata
agttctagagcactttttgtgaacttttattgggtgttttagaaaggatc
gtttgggaattctgatatgctaaacattaattcattttttaataatgtta
atttcagttggtcccagacccagtatctcaagggcaatacacaaattaaa
gtgggcccgatgggaaggtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_80829156_80830263
seq2: B6Ng01-074N15.b_45_1137 (reverse)

seq1  TCAGAGGCATGGGGAGATCTTATGAATGAGAATCTAAACTCCAGGGGCAC  50
      ||||| ||||||||||||||||||| ||||||||||||||||| ||||||
seq2  TCAGA-GCATGGGGAGATCTTATGATTGAGAATCTAAACTCCA-GGGCAC  48

seq1  TAGGAGGAAAAGTAAAAAGAATATGGAGAAATCTATGATATATAAGTCAA  100
      || |||  |||||||||   |||| ||||||||||||||| || |||| |
seq2  TA-GAG--AAAGTAAAA--GATAT-GAGAAATCTATGATAAAT-AGTC-A  90

seq1  TTCCCTCAGATCATGGCCACAAGGGATGAATTCTGTACTTGTATCATAAC  150
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTCCCTCAGATCATGGCCACAAGGGATGAATTCTGTAC-TGTATCATAAC  139

seq1  ACACCCCTCTGTTTATATCTAGAGAAAAAAATAGTGGTTCCTGTAGCAAT  200
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACACCCCTCTGTTTATATCTAGAGAAAAAAATAGT-GTTCCTGTAGCAAT  188

seq1  GCCCTCTGCTAAAAATTGGGGGATAACTATTTGAGTTACTGGAAATATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTGCTAAAAATTGGGGGATAACTATTTGAGTTACTGGAAATATCT  238

seq1  AAAGTCACACTGTCTGATTTCTCCATCAAAAATCCATTACTCAATTCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCACACTGTCTGATTTCTCCATCAAAAATCCATTACTCAATTCAGT  288

seq1  ATGCAACATCCAGAGTCAGGAATGGTCCAGCTGAGCAAGGAGATCTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAACATCCAGAGTCAGGAATGGTCCAGCTGAGCAAGGAGATCTCTTT  338

seq1  CTTGGTAAGTATTCCCTTGGCACTGTGAGCACTAGGAAGGCATTTCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAAGTATTCCCTTGGCACTGTGAGCACTAGGAAGGCATTTCTGTT  388

seq1  GAATCTGCTCACACTTTTAAAGATAGAAAAGCCTGTATGTATCTGGATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGCTCACACTTTTAAAGATAGAAAAGCCTGTATGTATCTGGATAT  438

seq1  GTATAAAGGCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  500
      ||||||||||||   |||||||||||||||||||||||||||||||||||
seq2  GTATAAAGGCTT---TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  485

seq1  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  535

seq1  TCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTACAGTTTGTTTTGCCTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTACAGTTTGTTTTGCCTGAC  585

seq1  TAATACAAAACAGGTTGATGGGAATCTAACTTAGTTATAAGTTTTCAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACAAAACAGGTTGATGGGAATCTAACTTAGTTATAAGTTTTCAGGA  635

seq1  AGCTGATACTTTCCAAGGGTGACTACCTTTCCAATGCCTGGCCAAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATACTTTCCAAGGGTGACTACCTTTCCAATGCCTGGCCAAAAAAA  685

seq1  AAAATTCCTACCTGTCTCAAACCATATCCATAGATAGTTGATTTTCTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCCTACCTGTCTCAAACCATATCCATAGATAGTTGATTTTCTTAC  735

seq1  TCTTTACCTCATCACAAATCCTTCCCTTAGTTTTTGTTTTAGTCAATCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACCTCATCACAAATCCTTCCCTTAGTTTTTGTTTTAGTCAATCAG  785

seq1  TGAAATTGTCTTAGTTAATATTAATATTCCATGGCAAAATCCAGGTTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTGTCTTAGTTAATATTAATATTCCATGGCAAAATCCAGGTTTGC  835

seq1  TAATTCCACAAAACACGTTGTTATAACTTCTAACTCTACGCCTGAACAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCACAAAACACGTTGTTATAACTTCTAACTCTACGCCTGAACAGA  885

seq1  AAAATTCTATGAAAAATGCTGTCAAAATGAATGCTGTTATTTAAATAATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTATGAAAAATGCTGTCAAAATGAATGCTGTTATTTAAATAATG  935

seq1  ATGCTTTTTCAAAGTGGATTTTTACAACAATAAATACCACATGTCAGCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTTTCAAAGTGGATTTTTACAACAATAAATACCACATGTCAGCTA  985

seq1  CTTGTCATAAATGATACAAGATTGCTATAATGCTATTGCAGATTGGAAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCATAAATGATACAAGATTGCTATAATGCTATTGCAGATTGGAAAT  1035

seq1  ATAATTCTATCTTTGAGCATCTAAAGGTCTGACTAAAATGATTCTTTATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCTATCTTTGAGCATCTAAAGGTCTGACTAAAATGATTCTTTATT  1085

seq1  CTGAATTC  1108
      ||||||||
seq2  CTGAATTC  1093

seq1: chr16_80681351_80682421
seq2: B6Ng01-074N15.g_68_1139

seq1  GAATTCTTTATAAAAGCTGCATCTCTCTCTTTAGGAAGTGTCAATGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATAAAAGCTGCATCTCTCTCTTTAGGAAGTGTCAATGGAAA  50

seq1  TAATCAAAGTAAACATACTTTATTTTCCTGATTTCTTTTCCATATGTCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAAGTAAACATACTTTATTTTCCTGATTTCTTTTCCATATGTCGC  100

seq1  TTTCCCTTTTTTTTTTTTTTTTAAACAATTCAGTCCTGTCCTTTTGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTTTTTTTTTTTTTTTAAACAATTCAGTCCTGTCCTTTTGAAAG  150

seq1  ACTTGTTTATAATTTAAAACCTTCAAGTCATTAAAAATTTAATGGCTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTTATAATTTAAAACCTTCAAGTCATTAAAAATTTAATGGCTCAG  200

seq1  TGGTTAAGACAGACAAGTTCTTGGAGCTCACCTGGATTTGTTTTCAAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAAGACAGACAAGTTCTTGGAGCTCACCTGGATTTGTTTTCAAGCT  250

seq1  GAAAGTGTCTGTCCCAGTTGTAACACAGGTGTAGTGTAAAGACATCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGTCTGTCCCAGTTGTAACACAGGTGTAGTGTAAAGACATCAGTG  300

seq1  GTGACATGCTCTCAACTCCACTTTTAAATCACTGCTGTCACCACTATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATGCTCTCAACTCCACTTTTAAATCACTGCTGTCACCACTATATT  350

seq1  TATAAAGTGAATTCTGGAAGTTTCCCACAGAGGAGGAGGCCACATTGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGTGAATTCTGGAAGTTTCCCACAGAGGAGGAGGCCACATTGATA  400

seq1  GACAGGGAGAAGAAACTTGTTCAAAGGTGCATAACAAAATCTACTTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGAGAAGAAACTTGTTCAAAGGTGCATAACAAAATCTACTTAAAA  450

seq1  GAATCATTTGAACAAATTCTTTCATTGCTTAACTTAACAGAAAGACTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATTTGAACAAATTCTTTCATTGCTTAACTTAACAGAAAGACTTGC  500

seq1  TGAAAGTTTGTCTATAAGTATAATTCTCAAGAAGCTTTGACATAACCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTTTGTCTATAAGTATAATTCTCAAGAAGCTTTGACATAACCTTA  550

seq1  TCTTTAACAATTGGTATTACAATTTACTGAAAACTATTTCTGTTTCATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAACAATTGGTATTACAATTTACTGAAAACTATTTCTGTTTCATAT  600

seq1  ATTTTATGTAAATATAGTATAATGTATTATATGTATTTACTATA-TTATA  649
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATTTTATGTAAATATAGTATAATGTATTATATGTATTTACTATATTTATA  650

seq1  AAATATATTATTTTTGTTTACATACATGACAATTTCTTTAAAACTAATGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATTATTTTTGTTTACATACATGACAATTTCTTTAAAACTAATGT  700

seq1  AATC-TTATAGGATACATTATCTCCCTTCTTCACGTTTAAACTGAATAAT  748
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTATAGGATACATTATCTCCCTTCTTCACGTTTAAACTGAATAAT  750

seq1  TT--AAATTTCAGATCAGTGTAAATTAGAAGTGCATAGATATAT-AATTA  795
      ||  || ||||||||||||||||||||||||||||||||||||| |||||
seq2  TTTAAATTTTCAGATCAGTGTAAATTAGAAGTGCATAGATATATAAATTA  800

seq1  AGTGT--ATTTTTCTTGAGCTATTTTATGTTAACTAT-GTATATGGATGC  842
      |||||   ||||||||||||||||||||||||||||| ||||||||||||
seq2  AGTGTTATTTTTTCTTGAGCTATTTTATGTTAACTATGGTATATGGATGC  850

seq1  AACTACAGAAGACATCAAAGTGACTC-TTTTTAATTTCTACAATG-ATAT  890
      |||||||||||||||| ||||||||| |||||||||||||||||| ||||
seq2  AACTACAGAAGACATC-AAGTGACTCTTTTTTAATTTCTACAATGAATAT  899

seq1  AAGTTCTAGAGCAC-TTTTGTGAACTTT--ATGTGTG-TTTAGAAAGGAT  936
      |||||||||||||| |||||||||||||   || ||| ||||||||||||
seq2  AAGTTCTAGAGCACTTTTTGTGAACTTTTATTGGGTGTTTTAGAAAGGAT  949

seq1  CGTTTGGG-ATTCTGAATATGCTAAACATTAAATTCATTTTTTAATTAAT  985
      |||||||| |||||| |||||||||||||| |||||||||||||| ||||
seq2  CGTTTGGGAATTCTG-ATATGCTAAACATT-AATTCATTTTTTAA-TAAT  996

seq1  GTTTAATTTCAGTTGGTCCCCAGAACCCCAAGTATCTTCCAAGGGCAATA  1035
      | ||||||||||||||| ||||||   || |||||||  |||||||||||
seq2  G-TTAATTTCAGTTGGT-CCCAGA---CCCAGTATCT--CAAGGGCAATA  1039

seq1  CCACAATATAAAAGTGGTGCCCGATGGGAAGGTGTT  1071
       ||||| || ||||||| ||||||||||||||||||
seq2  -CACAA-ATTAAAGTGG-GCCCGATGGGAAGGTGTT  1072