BAC Information

Click to search

BAC

Clone NameB6Ng01-075F18
Chromosome16 (Build37)
Map Location 86,328,881 - 86,487,228
singlet/doubletdoublet
Overlap genenone
Upstream geneCyyr1, LOC100039994, LOC622000, Adamts1, Adamts5, LOC100040025, LOC100039780
Downstream geneN6amt1, Zfp294, ORF5, LOC100040088, Usp16, Cct8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075F18.bB6Ng01-075F18.g
ACCDH891941DH891942
length1,1991,083
definitionDH891941|Mus musculus domesticus DNA, BAC clone: B6Ng01-075F18, 5' end.DH891942|Mus musculus domesticus DNA, BAC clone: B6Ng01-075F18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,486,030 - 86,487,228)(86,328,881 - 86,329,971)
sequence
gaattctgttcaaattcctaaatcttataccgtaatcaatcaaataaaca
gttttaatttataaatatttttctttcacatatatttgaggcaatttatc
actgaaataagaacacttgcatgaaatgaagatataaataagatactaaa
acaaaaatatacatttttttcatcataaacttctcatatgcagctgaata
caagcagtcaacatcttactataagttggcttttcagcatcgtctgtcag
gaattcagtcgtgaggtagaccctagacccgcagcatcaacttgacctaa
taactctgagtaagaagacagtctgacattcaagaaactggaacattttt
gtttattcccaaagtggctcagatcatgtgaccatgtaaacatcttttgt
gacccactttatttgcttcactttactttttcttgccacatcaatgatgc
atactttgtgaaaacatttcagttaatgtgctagttttatgaaaactggt
gctaataatgctgtgaataaatgctaatttgttaaccattctttcattat
catgacaaacaactaaggaaaacaacaaagggaaagatttatttttgcca
cctggtttatgactgtgctctactggctatgatatatttggatctgtagt
ggaaccaagcatcatggtagggtgtatacagaagaataatactgtgcaac
atgttgtatctagaaattgaaaaacacaaagggccaagatgctttgtaag
ggtacaattctaaggattcaacttcattctattaggtatcaccttccaaa
gatgctaccagctttcagttgtaccatgaactagcacccagtcctttgag
gataggacctttctgagatctaagacctgagccatattgtgttacatatg
tttaggattgaatgcattaaacaatctaaatgttgattttatcatacctt
tctaatgtacaaaatatgtgaagatcaaattaaaatcattgatctagtat
attgttcatttcagttttaattactgctgctctttacatacaagaaatag
acatgggcattctgttggaggaattaacagaaattgtaataagatccata
ctgactaatctagaaacatcgatattttgtccacgaggcgtagaaaatac
ttgtcatataagaactgtcaagaatactctggattccagcctaggtttc
gaattctttcagttgccttatgcctttcttgtaactcctattaagttgta
tcttttttttaatcattttacatctgagaatgtctctaccatgaattcca
aatctacattcatatcatatggttatttcatttttaaaacctattaagtc
cttttccattttttaaaagatattctttcatatgtaatatctgaacatac
atacaatgatttcagaatatcaaaattgctggcttttctttctgggtaat
tgttatatcagggattttcttaattcctttttagatatttattttattcc
aataaaaaaataaatgatactcacatatgtcaaaggaaacaaaaataaga
taaaggtaatgatgacaacttcatctatcagtggttctctgaagatattt
aagatgccctttactggtcaacttatcaatgggtattgtcctttaggaag
acataacatggcacttccagggaatgagctgatctcaggaattaaaacac
attgagtttctgcccaaaatacttgggcttatggattcatttatatgaaa
ctgagttcacctcctataaatgtgttatgttgtgaagagaaatggatatg
tgtgagaaagagcccagaaaaacagtgagcatgctggcttgccatcatct
tacctcctgaatctgatctaaagaaaatatctccctggatgagaaacttt
tgttcatgacctctctgtagaatgtgaacatgtctgctgtagagcttaag
cagataatgctggcactgttccttgccaggtcctagggaaatgaagcaac
agaggtgctacttaattaagcttaaactgtcttataggagtttttgacag
aggacaatgattttggcttttgtttttagccaaagaaaatctatatctta
agtctttaataccaaacacacattctttgtatgtgttgtggttttataat
aagattcttgaaaatcagaacaggacacaaagatctctctggtcatgtag
tttaagaacactttagcaaagtcagaacatgtgtgagcataacgttagta
caggtctgacggaatgtacacaacaataagaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_86486030_86487228
seq2: B6Ng01-075F18.b_45_1243 (reverse)

seq1  GAAACCTA-GCT-GAATCC--AGTA-TCTTG-CAGTTCTTTATATG-CAA  43
      |||||||| ||| ||||||  |||| ||||| |||||| ||||||| |||
seq2  GAAACCTAGGCTGGAATCCAGAGTATTCTTGACAGTTC-TTATATGACAA  49

seq1  GTA-TTTCTACTGCCTCGT-GAC-AAATATCGATGTTTCTAGATTAGTCA  90
      ||| ||||||| ||||||| ||| ||||||||||||||||||||||||||
seq2  GTATTTTCTAC-GCCTCGTGGACAAAATATCGATGTTTCTAGATTAGTCA  98

seq1  GTAATGAATCCTTATTAC-ATTTCTGTTTATTCTTCCATCAGAATGCCCA  139
      || ||| || |||||||| ||||||||| |||| |||| |||||||||||
seq2  GT-ATGGAT-CTTATTACAATTTCTGTTAATTCCTCCAACAGAATGCCCA  146

seq1  TGTCTATTTCCTTGTATGTAAAGAGCAGCAGTAATTTAAAAACTGAAATG  189
      ||||||||| ||||||||||||||||||||||||||  ||||||||||||
seq2  TGTCTATTT-CTTGTATGTAAAGAGCAGCAGTAATT--AAAACTGAAATG  193

seq1  AAACAATATACTAGATCAATGATTTTAATTTGATCTTCACATATTTTGTA  239
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AACAATATACTAGATCAATGATTTTAATTTGATCTTCACATATTTTGTA  242

seq1  CATTAGAAAGGTATTGATAAAATACAACATTTAGATTGTTTAATGCATTC  289
      ||||||||||||| ||||||||| ||||||||||||||||||||||||||
seq2  CATTAGAAAGGTA-TGATAAAAT-CAACATTTAGATTGTTTAATGCATTC  290

seq1  AATCCTAAAACATATGTAACACAATTATGGCTCAGGTCTTAGATTCTCAG  339
      |||||| ||||||||||||||||| |||||||||||||||||| ||||||
seq2  AATCCT-AAACATATGTAACACAA-TATGGCTCAGGTCTTAGA-TCTCAG  337

seq1  AAAGGTCCTATCCTC-AAGGACTGGGTGCTAGTTCATGGTACAACTGAAA  388
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAAGGTCCTATCCTCAAAGGACTGGGTGCTAGTTCATGGTACAACTGAAA  387

seq1  GCTGGTAGCATCTTTGGAAGGTGATACCTAATAGAATGAAGTTGAATCCT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTAGCATCTTTGGAAGGTGATACCTAATAGAATGAAGTTGAATCCT  437

seq1  TAGAATTGTACCCTTACAAAGCATCTTGGCCCTTTGTGTTTTTCAATTTC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGTACCCTTACAAAGCATCTTGGCCCTTTGTGTTTTTCAATTTC  487

seq1  TAGATACAACATGTTGCACAGTATTATTCTTCTGTATACACCCTACCATG  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATACAACATGTTGCACAGTATTATTCTTCTGTATACACCCTACCATG  537

seq1  ATGCTTGGTTCCACTACAGATCCAAATATATCATAGCCAGTAGAGCACAG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGGTTCCACTACAGATCCAAATATATCATAGCCAGTAGAGCACAG  587

seq1  TCATAAACCAGGTGGCAAAAATAAATCTTTCCCTTTGTTGTTTTCCTTAG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAACCAGGTGGCAAAAATAAATCTTTCCCTTTGTTGTTTTCCTTAG  637

seq1  TTGTTTGTCATGATAATGAAAGAATGGTTAACAAATTAGCATTTATTCAC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTCATGATAATGAAAGAATGGTTAACAAATTAGCATTTATTCAC  687

seq1  AGCATTATTAGCACCAGTTTTCATAAAACTAGCACATTAACTGAAATGTT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTATTAGCACCAGTTTTCATAAAACTAGCACATTAACTGAAATGTT  737

seq1  TTCACAAAGTATGCATCATTGATGTGGCAAGAAAAAGTAAAGTGAAGCAA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAAGTATGCATCATTGATGTGGCAAGAAAAAGTAAAGTGAAGCAA  787

seq1  ATAAAGTGGGTCACAAAAGATGTTTACATGGTCACATGATCTGAGCCACT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTGGGTCACAAAAGATGTTTACATGGTCACATGATCTGAGCCACT  837

seq1  TTGGGAATAAACAAAAATGTTCCAGTTTCTTGAATGTCAGACTGTCTTCT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAATAAACAAAAATGTTCCAGTTTCTTGAATGTCAGACTGTCTTCT  887

seq1  TACTCAGAGTTATTAGGTCAAGTTGATGCTGCGGGTCTAGGGTCTACCTC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGAGTTATTAGGTCAAGTTGATGCTGCGGGTCTAGGGTCTACCTC  937

seq1  ACGACTGAATTCCTGACAGACGATGCTGAAAAGCCAACTTATAGTAAGAT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACTGAATTCCTGACAGACGATGCTGAAAAGCCAACTTATAGTAAGAT  987

seq1  GTTGACTGCTTGTATTCAGCTGCATATGAGAAGTTTATGATGAAAAAAAT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTGCTTGTATTCAGCTGCATATGAGAAGTTTATGATGAAAAAAAT  1037

seq1  GTATATTTTTGTTTTAGTATCTTATTTATATCTTCATTTCATGCAAGTGT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTTTTGTTTTAGTATCTTATTTATATCTTCATTTCATGCAAGTGT  1087

seq1  TCTTATTTCAGTGATAAATTGCCTCAAATATATGTGAAAGAAAAATATTT  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTCAGTGATAAATTGCCTCAAATATATGTGAAAGAAAAATATTT  1137

seq1  ATAAATTAAAACTGTTTATTTGATTGATTAC-TTATAAGATTTAGGAATT  1187
      |||||||||||||||||||||||||||||||  |||||||||||||||||
seq2  ATAAATTAAAACTGTTTATTTGATTGATTACGGTATAAGATTTAGGAATT  1187

seq1  TGAACAGAATTC  1199
      ||||||||||||
seq2  TGAACAGAATTC  1199

seq1: chr16_86328881_86329971
seq2: B6Ng01-075F18.g_67_1149

seq1  GAATTCTTTCAGTTGCCTTATGCCTTTCTTGTAACTCCTATTAAGTTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGTTGCCTTATGCCTTTCTTGTAACTCCTATTAAGTTGTA  50

seq1  TCTTTTTTTTAATCATTTTACATCTGAGAATGTCTCTACCATGAATTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTAATCATTTTACATCTGAGAATGTCTCTACCATGAATTCCA  100

seq1  AATCTACATTCATATCATATGGTTATTTCATTTTTAAAACCTATTAAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACATTCATATCATATGGTTATTTCATTTTTAAAACCTATTAAGTC  150

seq1  CTTTTCCATTTTTTAAAAGATATTCTTTCATATGTAATATCTGAACATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCATTTTTTAAAAGATATTCTTTCATATGTAATATCTGAACATAC  200

seq1  ATACAATGATTTCAGAATATCAAAATTGCTGGCTTTTCTTTCTGGGTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATGATTTCAGAATATCAAAATTGCTGGCTTTTCTTTCTGGGTAAT  250

seq1  TGTTATATCAGGGATTTTCTTAATTCCTTTTTAGATATTTATTTTATTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATATCAGGGATTTTCTTAATTCCTTTTTAGATATTTATTTTATTCC  300

seq1  AATAAAAAAATAAATGATACTCACATATGTCAAAGGAAACAAAAATAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAAAATAAATGATACTCACATATGTCAAAGGAAACAAAAATAAGA  350

seq1  TAAAGGTAATGATGACAACTTCATCTATCAGTGGTTCTCTGAAGATATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTAATGATGACAACTTCATCTATCAGTGGTTCTCTGAAGATATTT  400

seq1  AAGATGCCCTTTACTGGTCAACTTATCAATGGGTATTGTCCTTTAGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCCCTTTACTGGTCAACTTATCAATGGGTATTGTCCTTTAGGAAG  450

seq1  ACATAACATGGCACTTCCAGGGAATGAGCTGATCTCAGGAATTAAAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACATGGCACTTCCAGGGAATGAGCTGATCTCAGGAATTAAAACAC  500

seq1  ATTGAGTTTCTGCCCAAAATACTTGGGCTTATGGATTCATTTATATGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTTTCTGCCCAAAATACTTGGGCTTATGGATTCATTTATATGAAA  550

seq1  CTGAGTTCACCTCCTATAAATGTGTTATGTTGTGAAGAGAAATGGATATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCACCTCCTATAAATGTGTTATGTTGTGAAGAGAAATGGATATG  600

seq1  TGTGAGAAAGAGCCCAGAAAAACAGTGAGCATGCTGGCTTGCCATCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAAAGAGCCCAGAAAAACAGTGAGCATGCTGGCTTGCCATCATCT  650

seq1  TACCTCCTGAATCTGATCTAAAGAAAATATCTCCCTGGATGAGAAACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCTGAATCTGATCTAAAGAAAATATCTCCCTGGATGAGAAACTTT  700

seq1  TGTTCATGACCTCTCTGTAGAATGTGAACATGTCTGCTGTAGAGCTTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATGACCTCTCTGTAGAATGTGAACATGTCTGCTGTAGAGCTTAAG  750

seq1  CAGATAATGCTGGCACTGTTCCTTGCCAGGTCCTAGGGAAATGAAGCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAATGCTGGCACTGTTCCTTGCCAGGTCCTAGGGAAATGAAGCAAC  800

seq1  AGAGGTGCTACTTAATTAAGCTTAAACTGTCTTATAGGAGTTTTTGACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGCTACTTAATTAAGCTTAAACTGTCTTATAGGAGTTTTTGACAG  850

seq1  AGGACAATGATTTTGGC-TTTGTTTTTAGCCAAAGAAAATCTATATCTTA  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGGACAATGATTTTGGCTTTTGTTTTTAGCCAAAGAAAATCTATATCTTA  900

seq1  AGTCTTTAATTACCAAACACACATTCTTTTGTATGTGTTGTGGTTTTATA  949
      ||||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  AGTCTTTAA-TACCAAACACACATTC-TTTGTATGTGTTGTGGTTTTATA  948

seq1  ATAAGATTCTTGAAAATCAGAAACAAGGACCACAAAGATCTCTCTGTCCA  999
      ||||||||||||||||||||||   |||| ||||||||||||||||  ||
seq2  ATAAGATTCTTGAAAATCAGAA--CAGGA-CACAAAGATCTCTCTGGTCA  995

seq1  TGTAGTTTAAGAACACTTTAGCAGAGTCAGACAATGTGTGAGCAT-ACGT  1048
      ||||||||||||||||||||||| |||||||  |||||||||||| ||||
seq2  TGTAGTTTAAGAACACTTTAGCAAAGTCAGAACATGTGTGAGCATAACGT  1045

seq1  AAGTACAGTGTCTGACAGAATGTAACAACAACAAAATAAGACA  1091
       ||||||| ||||||| |||||||   |||||  |||||||||
seq2  TAGTACAG-GTCTGACGGAATGTA--CACAAC--AATAAGACA  1083