BAC Information

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BAC

Clone NameB6Ng01-076D23
Chromosome16 (Build37)
Map Location 25,629,828 - 25,630,909
singlet/doubletsinglet
Overlap genenone
Upstream geneLpp, 5430420C16Rik
Downstream geneTrp63, LOC100043571, Leprel1, Cldn1, Cldn16, LOC100043057, Il1rap
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076D23.bB6Ng01-076D23.g
ACCDH892568DH892569
length1,1011,080
definitionDH892568|Mus musculus domesticus DNA, BAC clone: B6Ng01-076D23, 5' end.DH892569|Mus musculus domesticus DNA, BAC clone: B6Ng01-076D23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagaggaatctcaaacatgcttagttatcaggaaagtgta
aatcaaaacaacccagaaattacaccttacaccaatcagaatggctaaaa
tatgaaataaaactctagtgacaacacatgctggcgaggatgtagagaaa
gaacacttctcctttgctggtgggattgtaaactgctatgatcactctgg
aaatcaatctagtggttcctcacaaaattggaaatagttctacatgaaga
ccttgccataccgctcctggacatatatatactcaaaatatagtttacct
accacaaggatgtgtgctccactatgttcataggagccttatttataata
gccagaaactggaagctaccttgatggccctcaactgaaaaatggataca
gtaaatgtggttcatttacatgatggaatactatttaggtattaaaaatg
aggacatcctgaattcggtaggcaaatggatggagttagaaagtgtcatc
ccgagtaaggtaacccagacccaaaagggcatgcatggtatgtactcact
gataagtggatattagccaaaaagtacagaataaccaggatacaacccac
aaaccataagaagttaaacaagaaggaaagctcatataaggatgtttcaa
tcccacttaaaaggggggaaataatcaagggaaggatgcgagtgggagag
gagaggggcaggagaaaggggggcaggatcagatatggggcagacaggtg
agatatgggcagatcagatatggggcaggatcagatatggggcagacagg
tgagaaggccagagcttcaggatgaatggaaacatgaagctgccagggtt
agggtttggaggtcagggaacctctcgaaagtcctagaggcctgggatgt
gagaggctcccagaactcaacgtgggtgaccttagtctcaatgcccaaca
gtgcagaaatggagcctgaatagctcacctccagcacttagacagacccc
agtagaggaatggggacattacttaccttgaattttttgaccagaatgct
ctgtgtaaagagtgcaaggacaaaaatggagcatgagacttgaagcattg
g
gaattcaagaaagtttgaagaaagactctgccagctctcttcaaatgttt
ccagggccctcaaggactggaagaattaatctgtagccttcagagttaga
gaggacaactgtcgtaggagaaacaacaggggagtgcaattactcatgag
acagagagaattcagtctctttactagctatcttgtgaggacgtatgttc
ttacatggtggcaaaggtcggacagaagtgggatatcactgaaagtgagt
atcagagcagctgagccaggttattgattaacatgtcctctaatatgctt
attaatttaagattacacaataagagtaaaataaaactaaacatctttgc
atattttggcaccactgaacatgaaattaagcccttcaatatcatgatag
caaaatcctaaattggaaaaagttcctgataatttttttttctaatgagg
cataagcaaaatgcccagtgttgctttagcagtaatgcagaattcagtcc
taccaaattctgtatgctggattcttttgtccatgcccaaatgcctgggt
cacgtgaatccacgtggcaggaagcttggatgacaatgttagatgctgca
gattcatttcatttttgttcttttcagttgctcaatactctttccctctt
tctcttagtatgtcctcaaagtgaggcaatagagaactacactcatcaca
gaagctctaggacaaaagacgaagctactttttgatatatatgggtgtgg
atgcagaggtgaatcacgccttaagacctaagacttctattaagatttag
aagacttacagaagtattgttcattaatcggttttgcaatttccacttcc
cccaaggaattatgaaaattttgctaataatagcatattttcaagttaat
ttgttttatttggtgaatcagatcacaaagcagatcagccttcattgatt
taaatctttcattctctagtcaaagagagagagagagagagaggagagag
agagagagagagagagaagataacttttttctcccatggttctcagtttc
caactttgaattccaattgaagaaacttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_25629828_25630909
seq2: B6Ng01-076D23.g_68_1147

seq1  GAATTCAAGAAAGTTTGAAGAAAGACTCTGCCAGCTCTCTTCAAATGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAAGTTTGAAGAAAGACTCTGCCAGCTCTCTTCAAATGTTT  50

seq1  CCAGGGCCCTCAAGGACTGGAAGAATTAATCTGTAGCCTTCAGAGTTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCCCTCAAGGACTGGAAGAATTAATCTGTAGCCTTCAGAGTTAGA  100

seq1  GAGGACAACTGTCGTAGGAGAAACAACAGGGGAGTGCAATTACTCATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAACTGTCGTAGGAGAAACAACAGGGGAGTGCAATTACTCATGAG  150

seq1  ACAGAGAGAATTCAGTCTCTTTACTAGCTATCTTGTGAGGACGTATGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGAATTCAGTCTCTTTACTAGCTATCTTGTGAGGACGTATGTTC  200

seq1  TTACATGGTGGCAAAGGTCGGACAGAAGTGGGATATCACTGAAAGTGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGGTGGCAAAGGTCGGACAGAAGTGGGATATCACTGAAAGTGAGT  250

seq1  ATCAGAGCAGCTGAGCCAGGTTATTGATTAACATGTCCTCTAATATGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGCAGCTGAGCCAGGTTATTGATTAACATGTCCTCTAATATGCTT  300

seq1  ATTAATTTAAGATTACACAATAAGAGTAAAATAAAACTAAACATCTTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTAAGATTACACAATAAGAGTAAAATAAAACTAAACATCTTTGC  350

seq1  ATATTTTGGCACCACTGAACATGAAATTAAGCCCTTCAATATCATGATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGGCACCACTGAACATGAAATTAAGCCCTTCAATATCATGATAG  400

seq1  CAAAATCCTAAATTGGAAAAAGTTCCTGATAATTTTTTTTTCTAATGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCCTAAATTGGAAAAAGTTCCTGATAATTTTTTTTTCTAATGAGG  450

seq1  CATAAGCAAAATGCCCAGTGTTGCTTTAGCAGTAATGCAGAATTCAGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCAAAATGCCCAGTGTTGCTTTAGCAGTAATGCAGAATTCAGTCC  500

seq1  TACCAAATTCTGTATGCTGGATTCTTTTGTCCATGCCCAAATGCCTGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAATTCTGTATGCTGGATTCTTTTGTCCATGCCCAAATGCCTGGGT  550

seq1  CACGTGAATCCACGTGGCAGGAAGCTTGGATGACAATGTTAGATGCTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGAATCCACGTGGCAGGAAGCTTGGATGACAATGTTAGATGCTGCA  600

seq1  GATTCATTTCATTTTTGTTCTTTTCAGTTGCTCAATACTCTTTCCCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATTTCATTTTTGTTCTTTTCAGTTGCTCAATACTCTTTCCCTCTT  650

seq1  TCTCTTAGTATGTCCTCAAAGTGAGGCAATAGAGAACTACACTCATCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAGTATGTCCTCAAAGTGAGGCAATAGAGAACTACACTCATCACA  700

seq1  GAAGCTCTAGGACAAAAGACGAAGCTACTTTTTGATATATATGGGTGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCTAGGACAAAAGACGAAGCTACTTTTTGATATATATGGGTGTGG  750

seq1  ATGCAGAGGTGAATCACGCCTTAAGACCTAAGACTTCTATTAAGATTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGGTGAATCACGCCTTAAGACCTAAGACTTCTATTAAGATTTAG  800

seq1  AAGACTTACAGAAGTATTGTTCATTAATCGGTTTTGCAATTTCCACTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTACAGAAGTATTGTTCATTAATCGGTTTTGCAATTTCCACTTCC  850

seq1  CCCAAGGAATTATGAAAATTTTGCTAATAATAGCATATTTTCAAGTTAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGAATTATGAAAATTTTGCTAATAATAGCATATTTTCAAGTTAAT  900

seq1  TTGTTTTATTTGGTGAATCAGATCACAAAGCAGATCAGCCTTCATTGATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTATTTGGTGAATCAGATCACAAAGCAGATCAGCCTTCATTGATT  950

seq1  TATATCTTTCATTCTCTTAAGTCAAAGAGAGAGAGAGAGAGAGAGGAGAG  1000
      || ||||||||||||||  |||||||||||||||||||||||||||||||
seq2  TAAATCTTTCATTCTCT--AGTCAAAGAGAGAGAGAGAGAGAGAGGAGAG  998

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGACTATTTTCCCCCAT-GTTCTCAG  1049
      ||||||||||||||||||| ||| | ||| ||||| ||||| ||||||||
seq2  AGAGAGAGAGAGAGAGAGA-AGATA-ACTTTTTTCTCCCATGGTTCTCAG  1046

seq1  TTTCCAACTTTGAATT-CAATTGAAGAAACTTAA  1082
      |||||||||||||||| |||||||||||||||||
seq2  TTTCCAACTTTGAATTCCAATTGAAGAAACTTAA  1080