BAC Information

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BAC

Clone NameB6Ng01-076I12
Chromosome16 (Build37)
Map Location 56,320,376 - 56,321,088
singlet/doubletsinglet
Overlap geneLOC672835
Upstream geneNfkbiz, Gm1752, Lrriq2, EG667966, LOC629242, Rpl24, Zbtb11, Pcnp, Rg9mtd1, Senp7, Impg2
Downstream geneAbi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076I12.bB6Ng01-076I12.g
ACCDH892774DH892775
length9471,027
definitionDH892774|Mus musculus domesticus DNA, BAC clone: B6Ng01-076I12, 5' end.DH892775|Mus musculus domesticus DNA, BAC clone: B6Ng01-076I12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttgaagaacagtatcttcacttgtaacttcttgagctctact
ttaaaatccagagcctttgagttaaatatccagagactcaaacttaactt
taaaagaaaagacattctgtacccttcaggcacaataccactatagccaa
ccctgctattacttcagtgccaccactgcctagctgatacaaaaagacag
ctgggaggagagattttcagaagtctgactcagccactaaggaatgactt
agcttttctctaccccttcacgagtgggaaaatatcttgaagagacaatc
aggtttataaaatgaagatttgccctaccatattgtactctttatgctgt
ggtctggtgcatcctgggtatcttcaaaacactttccagcagttctgaac
atcaaagctattccctgtgaatcttaaggcatcatctgtcttctgatatt
tggattggtatgcaaaaacaatagagaataaaactagcatgcttggttac
aagtcaaggcaatagcatcaaacttaccagtagtcagtgtgttcctcatg
gacatgcttgctataaaaggggttaagatcccacacaatgtccttatgaa
ttagtaaaaacaattcattttatttaaccttattcattgtctgcatttct
aaaacttggtctatgagacccacaataaggcacttgtaccatattttgca
gtaaatgccatgttgttaacagaaaaaggactttatgcttgagctatgat
ggaagtagctgttttcaagaaacaccatatcccattttattgatattgta
acaagttgcctacatgatggcctatatagcaacccaagttatttttaaat
atctagtagtcagaaatccaacatggatcccattagcttaaattaaacag
agtcatgttcctctgagacatttggagggagtttaatcctttgctct
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggt
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactagcatatccggggatccatcccataatc
agcttccaatgctgacaccattgcatacactagcagattatgctgaaagg
accctgatatagcttgtctcttgtcagagtatgcctgggcctagcaaaca
tagatgtggatgctcacagtcgctaatggtgtgatcacatggtccccaat
gtagagctagagaaagtaccaaagatgctaaagggatctgcaaccttata
gtggaacatcattatgaactaaaccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_56320376_56321088
seq2: B6Ng01-076I12.b_45_757 (reverse)

seq1  ACATGGCATTTACTGCAAAATATGGTACAAGTGCCTTATTGTGGGTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCATTTACTGCAAAATATGGTACAAGTGCCTTATTGTGGGTCTCA  50

seq1  TAGACCAAGTTTTAGAAATGCAGACAATGAATAAGGTTAAATAAAATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCAAGTTTTAGAAATGCAGACAATGAATAAGGTTAAATAAAATGAA  100

seq1  TTGTTTTTACTAATTCATAAGGACATTGTGTGGGATCTTAACCCCTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTACTAATTCATAAGGACATTGTGTGGGATCTTAACCCCTTTTA  150

seq1  TAGCAAGCATGTCCATGAGGAACACACTGACTACTGGTAAGTTTGATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGCATGTCCATGAGGAACACACTGACTACTGGTAAGTTTGATGCT  200

seq1  ATTGCCTTGACTTGTAACCAAGCATGCTAGTTTTATTCTCTATTGTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTTGACTTGTAACCAAGCATGCTAGTTTTATTCTCTATTGTTTTT  250

seq1  GCATACCAATCCAAATATCAGAAGACAGATGATGCCTTAAGATTCACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACCAATCCAAATATCAGAAGACAGATGATGCCTTAAGATTCACAGG  300

seq1  GAATAGCTTTGATGTTCAGAACTGCTGGAAAGTGTTTTGAAGATACCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCTTTGATGTTCAGAACTGCTGGAAAGTGTTTTGAAGATACCCAG  350

seq1  GATGCACCAGACCACAGCATAAAGAGTACAATATGGTAGGGCAAATCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCACCAGACCACAGCATAAAGAGTACAATATGGTAGGGCAAATCTTC  400

seq1  ATTTTATAAACCTGATTGTCTCTTCAAGATATTTTCCCACTCGTGAAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATAAACCTGATTGTCTCTTCAAGATATTTTCCCACTCGTGAAGGG  450

seq1  GTAGAGAAAAGCTAAGTCATTCCTTAGTGGCTGAGTCAGACTTCTGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGAAAAGCTAAGTCATTCCTTAGTGGCTGAGTCAGACTTCTGAAAA  500

seq1  TCTCTCCTCCCAGCTGTCTTTTTGTATCAGCTAGGCAGTGGTGGCACTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTCCCAGCTGTCTTTTTGTATCAGCTAGGCAGTGGTGGCACTGA  550

seq1  AGTAATAGCAGGGTTGGCTATAGTGGTATTGTGCCTGAAGGGTACAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAGCAGGGTTGGCTATAGTGGTATTGTGCCTGAAGGGTACAGAAT  600

seq1  GTCTTTTCTTTTAAAGTTAAGTTTGAGTCTCTGGATATTTAACTCAAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTCTTTTAAAGTTAAGTTTGAGTCTCTGGATATTTAACTCAAAGG  650

seq1  CTCTGGATTTTAAAGTAGAGCTCAAGAAGTTACAAGTGAAGATACTGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGATTTTAAAGTAGAGCTCAAGAAGTTACAAGTGAAGATACTGTTC  700

seq1  TTCAAGAGAATTC  713
      |||||||||||||
seq2  TTCAAGAGAATTC  713