BAC Information

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BAC

Clone NameB6Ng01-076J15
Chromosome16 (Build37)
Map Location 55,633,223 - 55,634,198
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043449, LOC667927, LOC436421, Zpld1
Downstream geneNfkbiz, Gm1752, Lrriq2, EG667966, LOC629242, Rpl24, Zbtb11, Pcnp, Rg9mtd1, Senp7, Impg2, LOC672835, Abi3bp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076J15.bB6Ng01-076J15.g
ACCDH892821DH892822
length835975
definitionDH892821|Mus musculus domesticus DNA, BAC clone: B6Ng01-076J15, 5' end.DH892822|Mus musculus domesticus DNA, BAC clone: B6Ng01-076J15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttaaaaatatgtttatttggtt
cactggagtctaacttcttgagttctttgtatatattggatattagccct
ctatcgaatgtaggattggtaaagcatttttcccaatttgttgcttgcca
ttttgttctattgacagtgtcctttgccttacagaagttttgcaatttta
tgaggtcccatttgtcaatttttgatcttagatcctgagcaattggtgtt
ttgtttaggaacatttcccctgtgcccatgtgttcaaggctttttcccac
tttctcttctactagattcagaatatctggttttatgtagaggcccttga
tccacttgggcttgatctttatacaaggagataagaatggatcaatttac
attcttctacatgttgatcaccagttgaaccagcaccatatgttgaatat
gctatcttttttttttcctgctcatttctggctcttcaattctattccat
tgatctacctgcctgtctctgtaccaataccatgttttttgtttgcttgt
ttgttttttaatcactattgctttgtagtacagcttgaggtaagtgatgg
tgattcccccagaagttcttttattgttgagagtacttttcgctatcctg
gggttttttgttattctagatgaatttgagaattgctctttctatctgtg
aagaattgagttgaatttttgattggcattgcattgaatctgtagactgc
ttttggtaaaatgtcatttttactatgttaatcctgctgatccaggaaca
tgaaagaccttttccatctcctgaggtctgttttg
gaattctattacaatgctctcaaggctaaaatgagtaacactgtttcaca
ccttggtactacatcccttgaatgctgtgctacagtattgctaagaacaa
ttggaattttctttgactcttagtgagttttcatcagaataaagatacag
ttttccctagggcagatgcattcctgcataattgttaatgggtgtgtagt
aaaggtggaagaaaaatacaagtttttaaacgaacaaatttggttaatga
aatactaattttgaatccaaaggattaccacaaatagtcctaaccaaacc
gaaatcctcttccaggaactgaaaacaattaaaagactgtgatttttttt
ttcttatttacatcctacagacgtattcagaccagagggtttttgattgc
ctgtcagcgcagggagaacagcgaacaactgaacctagtttcttcatgag
agtgaatatctgtgaaatcactgcaaggaaagaagagattaacaaataca
aacttctcttctgtgaagaaggagggatatataattagagtaattacagt
ttaatcctcaggattatattgataattagaacagaacaaatgtgataaaa
cagatcagtattttcaaatggcaggtgaatatctattaatagttttatag
aaccaaattactgagtcacatgtaattaataaacaaacatggctgagaat
atatgtagctcagtggcaggaatgtttgtctagtacacccgaggctctga
gtgctaatgaatggtgaagcctttactagttatgattcacagcagttatg
gctgcttgaataagaccaaactagtaaacatttcatgatggatgtcaaga
taacttcccgtgttggaagctattagcagcttatgaatggcaggagaggg
gagggtcacttttatcaagggtgcaacctttatatgttgcttgtctcgag
ggtgtcctacactcctatgctgtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_55633223_55634198
seq2: B6Ng01-076J15.g_68_1042

seq1  GAATTCTATTACAATGCTCTCAAGGCTAAAATGAGTAACACTGTTTCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTACAATGCTCTCAAGGCTAAAATGAGTAACACTGTTTCACA  50

seq1  CCTTGGTACTACATCCCTTGAATGCTGTGCTACAGTATTGCTAAGAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTACTACATCCCTTGAATGCTGTGCTACAGTATTGCTAAGAACAA  100

seq1  TTGGAATTTTCTTTGACTCTTAGTGAGTTTTCATCAGAATAAAGATACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATTTTCTTTGACTCTTAGTGAGTTTTCATCAGAATAAAGATACAG  150

seq1  TTTTCCCTAGGGCAGATGCATTCCTGCATAATTGTTAATGGGTGTGTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTAGGGCAGATGCATTCCTGCATAATTGTTAATGGGTGTGTAGT  200

seq1  AAAGGTGGAAGAAAAATACAAGTTTTTAAACGAACAAATTTGGTTAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGGAAGAAAAATACAAGTTTTTAAACGAACAAATTTGGTTAATGA  250

seq1  AATACTAATTTTGAATCCAAAGGATTACCACAAATAGTCCTAACCAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAATTTTGAATCCAAAGGATTACCACAAATAGTCCTAACCAAACC  300

seq1  GAAATCCTCTTCCAGGAACTGAAAACAATTAAAAGACTGTGATTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCTCTTCCAGGAACTGAAAACAATTAAAAGACTGTGATTTTTTTT  350

seq1  TTCTTATTTACATCCTACAGACGTATTCAGACCAGAGGGTTTTTGATTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTTACATCCTACAGACGTATTCAGACCAGAGGGTTTTTGATTGC  400

seq1  CTGTCAGCGCAGGGAGAACAGCGAACAACTGAACCTAGTTTCTTCATGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGCGCAGGGAGAACAGCGAACAACTGAACCTAGTTTCTTCATGAG  450

seq1  AGTGAATATCTGTGAAATCACTGCAAGGAAAGAAGAGATTAACAAATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATATCTGTGAAATCACTGCAAGGAAAGAAGAGATTAACAAATACA  500

seq1  AACTTCTCTTCTGTGAAGAAGGAGGGATATATAATTAGAGTAATTACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTCTTCTGTGAAGAAGGAGGGATATATAATTAGAGTAATTACAGT  550

seq1  TTAATCCTCAGGATTATATTGATAATTAGAACAGAACAAATGTGATAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCTCAGGATTATATTGATAATTAGAACAGAACAAATGTGATAAAA  600

seq1  CAGATCAGTATTTTCAAATGGCAGGTGAATATCTATTAATAG-TTTATAG  649
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAGATCAGTATTTTCAAATGGCAGGTGAATATCTATTAATAGTTTTATAG  650

seq1  AACCAAATTACTGAGTCACATGTAA-TAATAAACAAACATGGCTGAGAAT  698
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AACCAAATTACTGAGTCACATGTAATTAATAAACAAACATGGCTGAGAAT  700

seq1  ATATGTAGCTCAGTGGCAGGAATGTTTGTCTAGTACACCCGAGGCTCTGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAGCTCAGTGGCAGGAATGTTTGTCTAGTACACCCGAGGCTCTGA  750

seq1  GTGCTAATGAATGGTGAAGCCTTTACTAGTTATGAATTCACAGCAGTTAT  798
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTGCTAATGAATGGTGAAGCCTTTACTAGTTATG-ATTCACAGCAGTTAT  799

seq1  GGCTGCTTGAATAAGACCAAACTAGTAAACATTCCATGATGGATGTCAAG  848
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGCTGCTTGAATAAGACCAAACTAGTAAACATTTCATGATGGATGTCAAG  849

seq1  ATAAC-TCCCAGGCTGGAAGCTATTAGCAGCTTATGAATGGCAGGAGA-G  896
      ||||| ||||  | |||||||||||||||||||||||||||||||||| |
seq2  ATAACTTCCCGTGTTGGAAGCTATTAGCAGCTTATGAATGGCAGGAGAGG  899

seq1  GGAGGGTCACTTTTATTCAAGGGTGCAACCTTTTATATGTTGCCTGTTCT  946
      ||||||||||||||| |||||||||||||| |||||||||||| || |||
seq2  GGAGGGTCACTTTTA-TCAAGGGTGCAACC-TTTATATGTTGCTTG-TCT  946

seq1  CGAGGGTGTCCTACACTCATATGCCTGTAA  976
      |||||||||||||||||| |||| ||||||
seq2  CGAGGGTGTCCTACACTCCTATG-CTGTAA  975