BAC Information

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BAC

Clone NameB6Ng01-077E09
Chromosome16 (Build37)
Map Location 85,199,211 - 85,199,601
singlet/doubletsinglet
Overlap genenone
Upstream geneEG621729, LOC640489, LOC665664, LOC547311, LOC100039893, LOC100039634, Mrpl39, Jam2, Atp5j, LOC100039950, Gabpa, Gm311, App
Downstream geneCyyr1, LOC100039994, LOC622000, Adamts1, Adamts5, LOC100040025
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077E09.bB6Ng01-077E09.g
ACCDH893295DH893296
length586385
definitionDH893295|Mus musculus domesticus DNA, BAC clone: B6Ng01-077E09, 5' end.DH893296|Mus musculus domesticus DNA, BAC clone: B6Ng01-077E09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttttctgtcacagacgtagatctactcaccgtagtacattgaaatacaa
gaaattacaatggaaattgtgacatcaatctttgaaagagctcgctccat
taatacacacctccctggttcctttcttgctgtaatttgaatactgtgat
tgtttgttttgttttaaatgtcagcttgccacaacttggaatcacctgag
aacaaacatggcattgtctagatcaggttgggccaatggcatatctgtgg
gggatagtctcaatgtagaaattgatgaaggaaaacccagtgcactatgg
gtagcattgtggttaggctgagccctgaatttttgtaagcatgggggttg
gggtgtagatgaagcagcaagcaggccacatgggtgccttcatttttctc
tgattttgatggtgggtatgacaaactgtttatacttctgcctagactat
cactcactgatgaactgtatcctgcgaatgtaagccaaataaaacctttc
ctcaccaaaaatgctttggccagggcattttatcatagctacagaactga
agtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
cagaaacttaactcccctgcctgcctctccactcaccgactcaaccgaat
ttactgaacagaattgcatagcactagagagagagagcttcatgcctctt
gtctcctgagtactagggttaagcttgtgtatcccacacctggactaagc
ttctctttacctgaaactcgctctatacaaggctggacttggacttggag
atctccttgcctctgtctcctagaattaaatgaaggtctgtattccagct
ggatcacacagacttagaaggtctttggatgtgatctcttgccagagcag
ccatgttctgaattagaattcctctacaagcctggacaatgtattatgat
ccatacaatcacaagggggagggaaggggaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_85199211_85199601
seq2: B6Ng01-077E09.g_72_462

seq1  GAATTCCAGAAACTTAACTCCCCTGCCTGCCTCTCCACTCACCGACTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAACTTAACTCCCCTGCCTGCCTCTCCACTCACCGACTCAA  50

seq1  CCGAATTTACTGAACAGAATTGCATAGCACTAGAGAGAGAGAGCTTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAATTTACTGAACAGAATTGCATAGCACTAGAGAGAGAGAGCTTCATG  100

seq1  CCTCTTGTCTCCTGAGTACTAGGGTTAAGCTTGTGTATCCCACACCTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGTCTCCTGAGTACTAGGGTTAAGCTTGTGTATCCCACACCTGGA  150

seq1  CTAAGCTTCTCTTTACCTGAAACTCGCTCTATACAAGGCTGGACTTGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCTTCTCTTTACCTGAAACTCGCTCTATACAAGGCTGGACTTGGAC  200

seq1  TTGGAGATCTCCTTGCCTCTGTCTCCTAGAATTAAATGAAGGTCTGTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGATCTCCTTGCCTCTGTCTCCTAGAATTAAATGAAGGTCTGTATT  250

seq1  CCAGCTGGATCACACAGACTTAGAAGGTCTTTGGATGTGATCTCTTGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGGATCACACAGACTTAGAAGGTCTTTGGATGTGATCTCTTGCCA  300

seq1  GAGCAGCCATGTTCTGAATTAGAATTCCTCTACAAGCCTGGACAATGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCCATGTTCTGAATTAGAATTCCTCTACAAGCCTGGACAATGTAT  350

seq1  TATGATCCATACAATCACAAGGGGGAGGGAAGGGGAGGGGG  391
      |||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCCATACAATCACAAGGGGGAGGGAAGGGGAGGGGG  391