BAC Information

Click to search

BAC

Clone NameB6Ng01-077K21
Chromosome16 (Build37)
Map Location 82,705,875 - 82,706,978
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621470, LOC435484, Pgk1-ps1, EG665260
Downstream geneEG545172, LOC100039572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077K21.bB6Ng01-077K21.g
ACCDH893590DH893591
length1,10663
definitionDH893590|Mus musculus domesticus DNA, BAC clone: B6Ng01-077K21, 5' end.DH893591|Mus musculus domesticus DNA, BAC clone: B6Ng01-077K21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatttagctctcagccccattttttaatggggatatttgatt
ttctggtgttcaccttcttgagttctttatatataaatagaatcatgaaa
aaagaggaaggtaaagaaatgtcaaaatttgatcttataaatcaagtgct
ttataataactcatgttagactgtgtctgtgataataatgagtctcacca
gcgaggacacacacacaggacacacaagggttcttctgcagcatagcttt
aatgcatctcgagagaaagatgatcagcttctggggaggaggcccagaac
acaggaaactcagtccttaaatagaccacaagagcggttggagacgtatt
tcaccctgactggttgctcaccatcagcccagatgatgccacaggacagg
cagggcacaaggaatggaaaattaccccagcacatgcacagactacttgt
ttaccagttagaacaccatatatcagagccatcctgtaatggtgattgca
agggcggctcctcacattagaccaagaagtgaaaatattgatcagaaaga
aacaactgcaaaactctttattgtttcttatataatgatgtgctaatatg
tcaatgttgagtttttaacttttataaatatgccctacttgcacagaaga
ggtccttaggggactttatgttaaaagtgtacagcctttttgtattctct
taggaactatttggcacaattggaattatttataaactgatagtctatac
ttatgaataattcaaaatatcctgcattttgaatgtattaattttctata
tactacatacatttgttacctttatagattcctcagaggaatgtcatcaa
tggaataacttgatgctctcagtacttctgagaatagctgaggttggtat
gcagatggttagtttaatctttggactaacttataatgaaagaactaaga
attatccccttaaaggaaatcataagtatagagcaaattacaccaacagt
caccgatctttaaattctgttttggtctcctttacatgaaacgattggag
aggcatttgtagggtttcccgatcactactgatttcgagtatgtctctgg
gaatag
tcccttgtcaaaggagaatgggttgggggaatgtgacaggaacatggggg
ggggggggggaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_82705875_82706978
seq2: B6Ng01-077K21.b_48_1153

seq1  GAATTCTTTATTTAGCTCTCAGCCCCATTTTTTAATGGGGATATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATTTAGCTCTCAGCCCCATTTTTTAATGGGGATATTTGATT  50

seq1  TTCTGGTGTTCACCTTCTTGAGTTCTTTATATATAAATAGAATCATGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTGTTCACCTTCTTGAGTTCTTTATATATAAATAGAATCATGAAA  100

seq1  AAAGAGGAAGGTAAAGAAATGTCAAAATTTGATCTTATAAATCAAGTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGAAGGTAAAGAAATGTCAAAATTTGATCTTATAAATCAAGTGCT  150

seq1  TTATAATAACTCATGTTAGACTGTGTCTGTGATAATAATGAGTCTCACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATAACTCATGTTAGACTGTGTCTGTGATAATAATGAGTCTCACCA  200

seq1  GCGAGGACACACACACAGGACACACAAGGGTTCTTCTGCAGCATAGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGGACACACACACAGGACACACAAGGGTTCTTCTGCAGCATAGCTTT  250

seq1  AATGCATCTCGAGAGAAAGATGATCAGCTTCTGGGGAGGAGGCCCAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATCTCGAGAGAAAGATGATCAGCTTCTGGGGAGGAGGCCCAGAAC  300

seq1  ACAGGAAACTCAGTCCTTAAATAGACCACAAGAGCGGTTGGAGACGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAACTCAGTCCTTAAATAGACCACAAGAGCGGTTGGAGACGTATT  350

seq1  TCACCCTGACTGGTTGCTCACCATCAGCCCAGATGATGCCACAGGACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTGACTGGTTGCTCACCATCAGCCCAGATGATGCCACAGGACAGG  400

seq1  CAGGGCACAAGGAATGGAAAATTACCCCAGCACATGCACAGACTACTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCACAAGGAATGGAAAATTACCCCAGCACATGCACAGACTACTTGT  450

seq1  TTACCAGTTAGAACACCATATATCAGAGCCATCCTGTAATGGTGATTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGTTAGAACACCATATATCAGAGCCATCCTGTAATGGTGATTGCA  500

seq1  AGGGCGGCTCCTCACATTAGACCAAGAAGTGAAAATATTGATCAGAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCGGCTCCTCACATTAGACCAAGAAGTGAAAATATTGATCAGAAAGA  550

seq1  AACAACTGCAAAACTCTTTATTGTTTCTTATATAATGATGTGCTAATATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTGCAAAACTCTTTATTGTTTCTTATATAATGATGTGCTAATATG  600

seq1  TCAATGTTGAGTTTTTAACTTTTATAAATATGCCCTACTTGCACAGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTTGAGTTTTTAACTTTTATAAATATGCCCTACTTGCACAGAAGA  650

seq1  GGTCCTTAGGGGACTTTATGTTAAAAGTGTACAGCCTTTTTGTATTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTAGGGGACTTTATGTTAAAAGTGTACAGCCTTTTTGTATTCTCT  700

seq1  TAGGAACTATTTGGCACAATTGGAATTATTTATAAACTGATAGTCTATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAACTATTTGGCACAATTGGAATTATTTATAAACTGATAGTCTATAC  750

seq1  TTATGAATAATTCAAAATATCCTGCATTTTGAATGTATTAA-TTTCTATA  799
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTATGAATAATTCAAAATATCCTGCATTTTGAATGTATTAATTTTCTATA  800

seq1  TACTACATACATTTGTTACCTTTATAGATTCCTCAGAGGAATGTCATCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACATACATTTGTTACCTTTATAGATTCCTCAGAGGAATGTCATCAA  850

seq1  TGGAATAACTTGATGCTCTCAGTACTTCTGAGAATAGCTGAGGTTGGTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAACTTGATGCTCTCAGTACTTCTGAGAATAGCTGAGGTTGGTAT  900

seq1  GCAGATGGTTAGTTTAATCTTTGGACTAACTTATAATGAAAGAACTAAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGGTTAGTTTAATCTTTGGACTAACTTATAATGAAAGAACTAAGA  950

seq1  ATTATCCCC-TAAAGGAAATCATAAGTATAGAGCAAATTACA-CAACAGT  997
      ||||||||| |||||||||||||||||||||||||||||||| |||||||
seq2  ATTATCCCCTTAAAGGAAATCATAAGTATAGAGCAAATTACACCAACAGT  1000

seq1  CACCGATCTTTAAATTCTGTTTTGGTCTCCTTTACATGAAACAGATTGGA  1047
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CACCGATCTTTAAATTCTGTTTTGGTCTCCTTTACATGAAAC-GATTGGA  1049

seq1  GAGGCATATGTAGGGTTTCCGGATCACTACTGATTTCAGAGTATGTCTCT  1097
      ||||||| |||||||||||| |||||||||||||||| ||||||||||||
seq2  GAGGCATTTGTAGGGTTTCCCGATCACTACTGATTTC-GAGTATGTCTCT  1098

seq1  -GGAATAG  1104
       |||||||
seq2  GGGAATAG  1106