BAC Information

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BAC

Clone NameB6Ng01-079I01
Chromosome16 (Build37)
Map Location 79,015,293 - 79,056,510
singlet/doubletdoublet
Overlap genePrss7
Upstream geneLOC435483, LOC100039561, Cxadr, Btg3, D16Ertd472e, LOC100039605, 4930570E03Rik, Chodl
Downstream geneEG383172, 1700066C05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079I01.bB6Ng01-079I01.g
ACCDH894893DH894894
length6291,179
definitionDH894893|Mus musculus domesticus DNA, BAC clone: B6Ng01-079I01, 5' end.DH894894|Mus musculus domesticus DNA, BAC clone: B6Ng01-079I01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,015,293 - 79,015,920)(79,055,312 - 79,056,510)
sequence
gaattcaaccttcaaccaaagagtacacctggagggactcatggcatatg
tagcagaggatggccttgtcaggtatcagtgggaggagaggccctttccc
cagtgtaggggaatgccagcgcaggacagtgggagtcctgggtgagcacc
atcgtagaagtggaggattgaagggtaggaaagagggaggatggggtagg
gagtttccagagggaaacttggaaaggggataagattctaaatgtaagta
aataaaatatccaattatatgtataaaatatatatatacatacatacata
tatataatttctcaactatgtgattcagacaatttttttagaatagtaag
agaacactgcttggaaaaatgtctcaagcagaacatagagagctatctga
agatttccagagaaagaacagagagaaagcactctagaaaactgtctcaa
gcagaacacacagcgccagcttgggctcatgatttgacttcatgttgttt
gtttttgacaaactcaaacaccccttctctcaggaacctggacctagcca
agagtgtctttgcacacatgtgtgttcatatgaatgttttatagtatgga
tttttatacatttgaacataagtgtactt
gaattcactatgtcttgtcttcagataccaagggtttaactaaaagatca
gatttttcttttttcttttctttctttcttccttcctttctttcttcctt
tctttttcttttcttttttttttcatcttttaaatatttttacaatattt
gtcttcttcattattggctctagcttccccattggtcttactgtagctag
gtaaactcaacatttttctgaactgccctagcagcccctaaattaactac
gcagccacaaccatcagccttgcctctctcctcctcttagtctgggctgg
gctcctgtatgccaactccatatttgcctatatcatattcctgcagtgag
caagcaagtctgagcaaatatccatatccgaatactgagccatatcgaca
tgctgagagccatatccacatactgagccatatccatatactgagccata
tacacatacttttgcagccttctaaatttattactgcaacataataaccc
cattaaactgaatatttgcaatccacccatctgctttttgctatgaacta
ttactgaaagttatcctgacagtgttcaatttgtgaccatggaagaatgt
atacaaatattagagaatacaagaatgattcaacaaattggactttgaat
cacaaatttctgataaacaaaacagcaaatatgtatctaatattatcact
aatataataaggttataggcaacataatccacataaattagaaatcagaa
ttgtttaaatgctcacggtttgcagattctatgtcatcactaacaaaata
ctgatggtaattttacataagtaaatagcattatttttcacaaataatga
aaaaaccgataaatagaatagatatgtagacatgtattgtcactgctctt
gacaatatgtcttaggtatgacatagcacaagcaatgtaagcaaattggt
aaataaaatcaccttcaaattacacttccaaaagcaaagaaacattaaaa
ttgtagaaaacaaagataatattttctatatctacattctagtgataaac
gtctaaatcataaaggatttctatagaaaaccctttagaaataataacat
ctggaataaaaaatgaaagttggggcagtaagcacattttctattctcac
aaccttgggttgagttccgaaaggacaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_79015293_79015920
seq2: B6Ng01-079I01.b_46_674

seq1  GAATTCAACCTTCAACCAAAGAGTACACCTGGAGGGACTCATGGCATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCTTCAACCAAAGAGTACACCTGGAGGGACTCATGGCATATG  50

seq1  TAGCAGAGGATGGCCTTGTCAGGTATCAGTGGGAGGAGAGGCCCTTTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAGGATGGCCTTGTCAGGTATCAGTGGGAGGAGAGGCCCTTTCCC  100

seq1  CAGTGTAGGGGAATGCCAGCGCAGGACAGTGGGAGTCCTGGGTGAGCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTAGGGGAATGCCAGCGCAGGACAGTGGGAGTCCTGGGTGAGCACC  150

seq1  ATCGTAGAAGTGGAGGATTGAAGGGTAGGAAAGAGGGAGGATGGGGTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTAGAAGTGGAGGATTGAAGGGTAGGAAAGAGGGAGGATGGGGTAGG  200

seq1  GAGTTTCCAGAGGGAAACTTGGAAAGGGGATAAGATTCTAAATGTAAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCCAGAGGGAAACTTGGAAAGGGGATAAGATTCTAAATGTAAGTA  250

seq1  AATAAAATATCCAATTATATGTATAAAATATATATATACATACATACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATATCCAATTATATGTATAAAATATATATATACATACATACATA  300

seq1  TATATAATTTCTCAACTATGTGATTCAGACAATTTTTTTAGAATAGTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAATTTCTCAACTATGTGATTCAGACAATTTTTTTAGAATAGTAAG  350

seq1  AGAACACTGCTTGGAAAAATGTCTCAAGCAGAACATAGAGAGCTATCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACTGCTTGGAAAAATGTCTCAAGCAGAACATAGAGAGCTATCTGA  400

seq1  AGATTTCCAGAGAAAGAACAGAGAGAAAGCACTCTAGAAAACTGTCTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCCAGAGAAAGAACAGAGAGAAAGCACTCTAGAAAACTGTCTCAA  450

seq1  GCAGAACACACAGCGCCAGCTTGGGCTCATGATTTGACTTCATGTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACACACAGCGCCAGCTTGGGCTCATGATTTGACTTCATGTTGTTT  500

seq1  GTTTTTGACAAACTCAAACACCCCTTCTCTCAGGAACCTGGACCTAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGACAAACTCAAACACCCCTTCTCTCAGGAACCTGGACCTAGCCA  550

seq1  AGAGTGTCTTTGCACACATGTGTGTTCATATGAATG-TTTATAGTATGGA  599
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGAGTGTCTTTGCACACATGTGTGTTCATATGAATGTTTTATAGTATGGA  600

seq1  TTTATATACATTTGAACATAAGTGTACTT  628
      ||| |||||||||||||||||||||||||
seq2  TTTTTATACATTTGAACATAAGTGTACTT  629

seq1: chr16_79055312_79056510
seq2: B6Ng01-079I01.g_68_1246 (reverse)

seq1  CTTGTCCTTTCTGGGACTCAGACCCAGGTTTGTTGAAGGAATAGAAAATG  50
      ||||||||||| || ||||| ||||| | ||| |||  ||||||||||||
seq2  CTTGTCCTTTC-GGAACTCA-ACCCAAGGTTG-TGA--GAATAGAAAATG  45

seq1  TGCTTAACTGCCCCAACCTTTTTCA-TTTTTATT-CAGATTGTTATTATT  98
      ||||| |||||||||||   ||||| |||||||| |||| ||||||||||
seq2  TGCTT-ACTGCCCCAAC---TTTCATTTTTTATTCCAGA-TGTTATTATT  90

seq1  TTCTAAGGTGTTTCTATAGAAATTCTTTATGATTTTAGACGTTTATTCAC  148
      |   ||||  ||||||||||||| |||||||| |||||||||||| ||||
seq2  TCTAAAGGGTTTTCTATAGAAATCCTTTATGA-TTTAGACGTTTA-TCAC  138

seq1  TAGAATTGTAGATTATTAGAAAATAATTTATCTGTG-TTTCTACAATTTT  197
      ||||| |||||||   |||||||||  |||||| || |||||||||||||
seq2  TAGAA-TGTAGAT--ATAGAAAATA--TTATCTTTGTTTTCTACAATTTT  183

seq1  AATGTTTCCTTTGCTTTTTGGAAGTTGTTAATTTGAAGGTGATTTTATTT  247
      ||||||| |||||| ||||||||||   ||||||||||||||||||||||
seq2  AATGTTT-CTTTGC-TTTTGGAAGT--GTAATTTGAAGGTGATTTTATTT  229

seq1  ACCAATTTGCTTACATTGCTTGTGCTATGTCATACCTAAGACATTATTGT  297
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACCAATTTGCTTACATTGCTTGTGCTATGTCATACCTAAGACA-TATTGT  278

seq1  CAAGAGCAGTGACAATACATGTCTACATATCTATTCTATTTTATCGGTTT  347
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAAGAGCAGTGACAATACATGTCTACATATCTATTCTA-TTTATCGGTTT  327

seq1  TTTCATTATTTGTGAAAAATAATGCTATTTACTTATGTAAAATTACCATC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTATTTGTGAAAAATAATGCTATTTACTTATGTAAAATTACCATC  377

seq1  AGTATTTTGTTAGTGATGACATAGAATCTGCAAACCGTGAGCATTTAAAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTGTTAGTGATGACATAGAATCTGCAAACCGTGAGCATTTAAAC  427

seq1  AATTCTGATTTCTAATTTATGTGGATTATGTTGCCTATAACCTTATTATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGATTTCTAATTTATGTGGATTATGTTGCCTATAACCTTATTATA  477

seq1  TTAGTGATAATATTAGATACATATTTGCTGTTTTGTTTATCAGAAATTTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGATAATATTAGATACATATTTGCTGTTTTGTTTATCAGAAATTTG  527

seq1  TGATTCAAAGTCCAATTTGTTGAATCATTCTTGTATTCTCTAATATTTGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCAAAGTCCAATTTGTTGAATCATTCTTGTATTCTCTAATATTTGT  577

seq1  ATACATTCTTCCATGGTCACAAATTGAACACTGTCAGGATAACTTTCAGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTCTTCCATGGTCACAAATTGAACACTGTCAGGATAACTTTCAGT  627

seq1  AATAGTTCATAGCAAAAAGCAGATGGGTGGATTGCAAATATTCAGTTTAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTCATAGCAAAAAGCAGATGGGTGGATTGCAAATATTCAGTTTAA  677

seq1  TGGGGTTATTATGTTGCAGTAATAAATTTAGAAGGCTGCAAAAGTATGTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTATTATGTTGCAGTAATAAATTTAGAAGGCTGCAAAAGTATGTG  727

seq1  TATATGGCTCAGTATATGGATATGGCTCAGTATGTGGATATGGCTCTCAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGCTCAGTATATGGATATGGCTCAGTATGTGGATATGGCTCTCAG  777

seq1  CATGTCGATATGGCTCAGTATTCGGATATGGATATTTGCTCAGACTTGCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCGATATGGCTCAGTATTCGGATATGGATATTTGCTCAGACTTGCT  827

seq1  TGCTCACTGCAGGAATATGATATAGGCAAATATGGAGTTGGCATACAGGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACTGCAGGAATATGATATAGGCAAATATGGAGTTGGCATACAGGA  877

seq1  GCCCAGCCCAGACTAAGAGGAGGAGAGAGGCAAGGCTGATGGTTGTGGCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCCCAGACTAAGAGGAGGAGAGAGGCAAGGCTGATGGTTGTGGCT  927

seq1  GCGTAGTTAATTTAGGGGCTGCTAGGGCAGTTCAGAAAAATGTTGAGTTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTAGTTAATTTAGGGGCTGCTAGGGCAGTTCAGAAAAATGTTGAGTTT  977

seq1  ACCTAGCTACAGTAAGACCAATGGGGAAGCTAGAGCCAATAATGAAGAAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGCTACAGTAAGACCAATGGGGAAGCTAGAGCCAATAATGAAGAAG  1027

seq1  ACAAATATTGTAAAAATATTTAAAAGATGAAAAAAAAAAGAAAAGAAAAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATTGTAAAAATATTTAAAAGATGAAAAAAAAAAGAAAAGAAAAA  1077

seq1  GAAAGGAAGAAAGAAAGGAAGGAAGAAAGAAAGAAAAGAAAAAAGAAAAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAAGAAAGAAAGGAAGGAAGAAAGAAAGAAAAGAAAAAAGAAAAA  1127

seq1  TCTGATCTTTTAGTTAAACCCTTGGTATCTGAAGACAAGACATAGTGAAT  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCTTTTAGTTAAACCCTTGGTATCTGAAGACAAGACATAGTGAAT  1177

seq1  TC  1199
      ||
seq2  TC  1179