BAC Information

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BAC

Clone NameB6Ng01-079P22
Chromosome16 (Build37)
Map Location 55,821,547 - 55,992,850
singlet/doubletdoublet
Overlap geneNfkbiz, Gm1752, Lrriq2, EG667966, LOC629242, Rpl24, Zbtb11
Upstream geneLOC667927, LOC436421, Zpld1
Downstream genePcnp, Rg9mtd1, Senp7, Impg2, LOC672835, Abi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079P22.bB6Ng01-079P22.g
ACCDH895253DH895254
length1,117258
definitionDH895253|Mus musculus domesticus DNA, BAC clone: B6Ng01-079P22, 5' end.DH895254|Mus musculus domesticus DNA, BAC clone: B6Ng01-079P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,991,707 - 55,992,850)(55,821,547 - 55,821,804)
sequence
gaattctcagagaacaattttaatagtaaaacattgttttatggtgaatg
gtttgagtcctaaccttgaggaacttgggtaagcaaagacctagaaagaa
aggtctcggtactcagtaagtactttccctttcactgtgcactgtcctcc
ccggggcagctgtggtacttttcacctcaagggaagagagtcctggccaa
agggtggcaatgtaattgctcctagtctccaagtcatcagtaccatcaag
tcttgagacatttgttagttccacaatacaagtgtgattctcagctttat
tgtatatctaattcatatttcctgaatcattttcttttaaagattttttt
ttaatttgttatgtgtaagtacactgtagctgtctttagacactccggaa
gacaagagtcagatctcgttacgggtggttgtgagccaccatgtggttgc
tgggatttgaactcaggaccttcaggagagcagtcagtgctcttacccac
tgagccatctctccagccccctgaatcactttataccctcactggcacac
aggatttagctgcctcggtctcctgtcccgctacttcacctttgttttat
ttttacttttagactttttagttttatgtgaattgagtttttgcctgcgt
atgcatgtgcactatacatacacatgcctacaggtggttgtaatccacca
tgagggtgctaggaagcaaaactccatcctctgcaagaacaacagctctt
aactggtgagccatctccttagtcccaagtttgttgtttataagaacaat
cttttcactgtcctctttctgaggaagctcagatgaaaaaacattcagtg
gggcaagtaaataaaacaatcaaaatcttttagcattgtaagagttgtgg
gctgtggtcagcctgcctgttaatcccagcacttggagcctgattagaga
tacatcagtccaggatagcctggactacactgtagaccccaccttagaaa
agtagaacagacaacacaagcagtcagagtaccggagttgttaagatgga
ctcatgcatgactgcagatcatctgagttactctttgggtacttacgaca
ttgtatccctagctctt
gaggtcgggggagaagtgaaaagggaaaaggttatgagatggaagaaaag
agaatccgaggctctcaagttcttttccaggaagccagcgcgctagccct
cagggtcccttgggcgctggactccgcagaggtctaggcaaggacaacgt
gccagaatcaggacaaggcatctaatcactcatgactattcgcgtctgtc
cggccgctaaggaagtcacaggggccgcttaacgtctcgactatgggggg
gggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_55991707_55992850
seq2: B6Ng01-079P22.b_48_1164 (reverse)

seq1  AAGAGCTAGAGATTACAAATGTCCGGTAAGTACCCCAAAAGATAACTCAG  50
      ||||||||| || ||| ||||||  |||||||||| || || ||||||||
seq2  AAGAGCTAGGGA-TAC-AATGTC--GTAAGTACCCAAAGAG-TAACTCAG  45

seq1  ATGATCCTGCAGTCATGCATGGAGTCCATCTTACCAACTTCTCGGTTACT  100
      ||||| |||||||||||||| |||||||||||| |||   ||| | ||||
seq2  ATGAT-CTGCAGTCATGCAT-GAGTCCATCTTAACAA---CTCCGGTACT  90

seq1  CTGACTGCCTTTGTTGTTGTTCTGTTTCTACCTTTTCTTAAGGTGGGGTC  150
      |||||||| | |||||    |||| ||||| |||||| ||||||||||||
seq2  CTGACTGCTTGTGTTG----TCTG-TTCTA-CTTTTC-TAAGGTGGGGTC  133

seq1  TTACAGTGTAGTCCAGGCTATCCTTGGACTTGATGTTATCCTCCTAATTC  200
       |||||||||||||||||||||| ||||| ||||| ||||   |||| ||
seq2  -TACAGTGTAGTCCAGGCTATCC-TGGAC-TGATG-TATC--TCTAA-TC  176

seq1  AGGCTTCCAAGTGCTGGGATTAACAGGCAGGCCTGACCACAGCCCACAAC  250
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGGC-TCCAAGTGCTGGGATTAACAGGCAGG-CTGACCACAGCCCACAAC  224

seq1  TCTTACATTGCTTAAAGATTTTGATTTGTTTTATTTACTTGCCCCACTGA  300
      ||||||| |||| ||||||||||| |||||||||||||||||||||||||
seq2  TCTTACAATGCTAAAAGATTTTGA-TTGTTTTATTTACTTGCCCCACTGA  273

seq1  ATGTTTTTTCATCTGAGCTTCCTCAGAAAGAGGACAGTGAAAAGATTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTTCATCTGAGCTTCCTCAGAAAGAGGACAGTGAAAAGATTGTT  323

seq1  CTTATAAACAACAAACTTGGGACTAAGGAGATGGCTCACCAGTTAAGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAACAACAAACTTGGGACTAAGGAGATGGCTCACCAGTTAAGAGC  373

seq1  TGTTGTTCTTGCAGAGGATGGAGTTTTGCTTCCTAGCACCCTCATGGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTCTTGCAGAGGATGGAGTTTTGCTTCCTAGCACCCTCATGGTGG  423

seq1  ATTACAACCACCTGTAGGCATGTGTATGTATAGTGCACATGCATACGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAACCACCTGTAGGCATGTGTATGTATAGTGCACATGCATACGCAG  473

seq1  GCAAAAACTCAATTCACATAAAACTAAAAAGTCTAAAAGTAAAAATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAACTCAATTCACATAAAACTAAAAAGTCTAAAAGTAAAAATAAAA  523

seq1  CAAAGGTGAAGTAGCGGGACAGGAGACCGAGGCAGCTAAATCCTGTGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTGAAGTAGCGGGACAGGAGACCGAGGCAGCTAAATCCTGTGTGC  573

seq1  CAGTGAGGGTATAAAGTGATTCAGGGGGCTGGAGAGATGGCTCAGTGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGGGTATAAAGTGATTCAGGGGGCTGGAGAGATGGCTCAGTGGGT  623

seq1  AAGAGCACTGACTGCTCTCCTGAAGGTCCTGAGTTCAAATCCCAGCAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCACTGACTGCTCTCCTGAAGGTCCTGAGTTCAAATCCCAGCAACC  673

seq1  ACATGGTGGCTCACAACCACCCGTAACGAGATCTGACTCTTGTCTTCCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTGGCTCACAACCACCCGTAACGAGATCTGACTCTTGTCTTCCGG  723

seq1  AGTGTCTAAAGACAGCTACAGTGTACTTACACATAACAAATTAAAAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTAAAGACAGCTACAGTGTACTTACACATAACAAATTAAAAAAAA  773

seq1  ATCTTTAAAAGAAAATGATTCAGGAAATATGAATTAGATATACAATAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAAAAGAAAATGATTCAGGAAATATGAATTAGATATACAATAAAG  823

seq1  CTGAGAATCACACTTGTATTGTGGAACTAACAAATGTCTCAAGACTTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAATCACACTTGTATTGTGGAACTAACAAATGTCTCAAGACTTGAT  873

seq1  GGTACTGATGACTTGGAGACTAGGAGCAATTACATTGCCACCCTTTGGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTGATGACTTGGAGACTAGGAGCAATTACATTGCCACCCTTTGGCC  923

seq1  AGGACTCTCTTCCCTTGAGGTGAAAAGTACCACAGCTGCCCCGGGGAGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCTCTTCCCTTGAGGTGAAAAGTACCACAGCTGCCCCGGGGAGGA  973

seq1  CAGTGCACAGTGAAAGGGAAAGTACTTACTGAGTACCGAGACCTTTCTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCACAGTGAAAGGGAAAGTACTTACTGAGTACCGAGACCTTTCTTT  1023

seq1  CTAGGTCTTTGCTTACCCAAGTTCCTCAAGGTTAGGACTCAAACCATTCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTCTTTGCTTACCCAAGTTCCTCAAGGTTAGGACTCAAACCATTCA  1073

seq1  CCATAAAACAATGTTTTACTATTAAAATTGTTCTCTGAGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAACAATGTTTTACTATTAAAATTGTTCTCTGAGAATTC  1117

seq1: chr16_55821547_55821804
seq2: B6Ng01-079P22.g_77_334

seq1  GAGGTCGGGGGAGAAGTGAAAAGGGAAAAGGTTATGAGATGGAAGAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCGGGGGAGAAGTGAAAAGGGAAAAGGTTATGAGATGGAAGAAAAG  50

seq1  AGAATCCGAGGCTCTCAAGTTCTTTTCCAGGAAGCCAGCGCGCTAGCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCGAGGCTCTCAAGTTCTTTTCCAGGAAGCCAGCGCGCTAGCCCT  100

seq1  CAGGGTCCCTTGGGCGCTGGACTCCGCAGAGGTCTAGGCAAGGACAACGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCCCTTGGGCGCTGGACTCCGCAGAGGTCTAGGCAAGGACAACGT  150

seq1  GCCAGAATCAGGACAAGGCATCTAATCACTCATGACTATTCGCGTCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAATCAGGACAAGGCATCTAATCACTCATGACTATTCGCGTCTGTC  200

seq1  CGGCCGCTAAGGAAGTCACAGGGGCCGCTTAACGTCTCGACTATGGGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCGCTAAGGAAGTCACAGGGGCCGCTTAACGTCTCGACTATGGGGGG  250

seq1  GGGGGGGG  258
      ||||||||
seq2  GGGGGGGG  258