BAC Information

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BAC

Clone NameB6Ng01-081B24
Chromosome16 (Build37)
Map Location 85,825,145 - 85,977,544
singlet/doubletdoublet
Overlap geneAdamts5
Upstream geneAtp5j, LOC100039950, Gabpa, Gm311, App, Cyyr1, LOC100039994, LOC622000, Adamts1
Downstream geneLOC100040025, LOC100039780
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081B24.bB6Ng01-081B24.g
ACCDH896066DH896067
length1,100619
definitionDH896066|Mus musculus domesticus DNA, BAC clone: B6Ng01-081B24, 5' end.DH896067|Mus musculus domesticus DNA, BAC clone: B6Ng01-081B24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,976,467 - 85,977,544)(85,825,145 - 85,825,756)
sequence
gaattctcctgcttcagctggtatctggccaaattcaaccaagaggaggc
actggtgtaagattagggggcagcagggaaattgaagttgcaacatttct
ctttttgttggtcttggatggcagcagtcacctttaaatcagcaggtctc
catggatacagactcggtgtgccctatagaacacccctcatgagccatcc
caagatctcccacccttgcccttccttgaaggttgtgttgctttgctaac
tctgttgtcttcaaagatatctctccacacctattctttggtttctctgc
cctccctttgtctgtttcatgaactgttagcacaatacttatgtagatag
tattataatttcctgagtagatactgacaagtagataattgtacgtatat
aaatatgtcacataagttacatgtgtgtgacataattttatatgttttat
aacccagagaaaagacaatatttactctatctgaaaagtgttaaagcaac
aatccctcagagttagaaagtaattgaaccaagatttggatgccaagtaa
acagcgtccagatgtcaaactctcagcaggacagtgaaatgatatattcc
gaagcaccctgatttaactgcattgcctcccataaaaagactagactatg
ctgtgggtacactctgggttgatcatctcagttatatctgtggttacttc
ttatgtgtcagacattattttcagatgctccataatccttccataaagcg
actttataataagttgtccagatcatcttcttggaggtcagttttatctt
tatataaaaattagctgttcagattttcatcccattttcaagttcaagga
aagtaacttcccccttctcctcccttttatctatttaaccttatctcatt
tctaaatgcaccccaagttaatttcccacgtttccccccagatgccaccg
gtttgaatttttttaaaaagcatttttaaacacactccctgggtttagtc
tgggtaatttttaagtgggaaagtagaaaattggaatattggcatacaat
tctgggaagaaagaataagggactagaaaagaggttaaggacctttggta

gaattctgaacagaaccaatttgatcctggatttgtttttgttttgaata
ttttcccatatgtgtatatatacatatatatatatatctcatatacaggt
gtatttttttgtttctagttcattgatctcagatctgtttatttcttcct
atctactttatttttggtgttatttgttctctattatctagcacattcaa
gcatatcattgagttgttaacattagatctctttaacttttgaggtaggc
acttagtgctatgaacttgccttttcgaactgccctgtgcccataggttt
gtgtatgctgtgtaacattctggtctaatctgtgtgatctaatctgatgg
gccgtggaccagaagaatggtgtttgggatcactgtggattttagccctc
agatcccaacagtcctctgtttgaagtttctgtttggagctctgggttaa
ggattaaggagtaccaggtaaatgaagtgggtggggcggttgataggctg
ccagtttaggagagagggattgattctaagcaagacatgaggtccagttc
cacgaaaggatagtagagtatactgacttttttttcctggattgcagtgg
aatcttaaagatggaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_85976467_85977544
seq2: B6Ng01-081B24.b_45_1144 (reverse)

seq1  TACC-AATGTCCTTAACATCTTTTCATGT-CCTTATTCTTTCTTCCCAGA  48
      |||| || ||||||||| |||||||  || ||||||||||||||||||||
seq2  TACCAAAGGTCCTTAACCTCTTTTCTAGTCCCTTATTCTTTCTTCCCAGA  50

seq1  ATTGTACTGCC-ATATCCTA--TTTCTACCTTCCATCT--AAAAATAACC  93
      |||||| |||| |||| | |  ||||||| ||||  ||  |||| || ||
seq2  ATTGTA-TGCCAATATTCCAATTTTCTACTTTCCCACTTAAAAATTACCC  99

seq1  AGACTAAA-CCAGAGA-TGTGTTAATAAATGCTTAT--AAAATAATCAAA  139
      |||||||| |||| || |||||| | |||||||| |  |||| | |||||
seq2  AGACTAAACCCAGGGAGTGTGTTTAAAAATGCTTTTTAAAAAAATTCAAA  149

seq1  CAGAT-GCATACTGAGGAG-AACGTGTGTATGTATCTGTGTGTGCA-TTA  186
      | | | |||| ||| || | |||||| | |  || ||  | ||||| |||
seq2  CCGGTGGCAT-CTGGGGGGAAACGTGGGAAATTAACTTGGGGTGCATTTA  198

seq1  GAAAT-AGATAGAGATAAATAGAT-AAAGGGA-GAG-AGGGGGAAG-TAC  231
      ||||| |||||  | ||||||||| ||||||| ||| ||||||||| |||
seq2  GAAATGAGATAAGGTTAAATAGATAAAAGGGAGGAGAAGGGGGAAGTTAC  248

seq1  TCT-CTTGAACTTGAAAATGCGATTGAAATCTG-ACAGCTAATATTTTAT  279
      | | |||||||||||||||| |||  ||||||| ||||||||| ||||||
seq2  TTTCCTTGAACTTGAAAATGGGATGAAAATCTGAACAGCTAAT-TTTTAT  297

seq1  ATAAAAGATAAAACTGA-CTCCAAGAAGATGATCTGGAC-ACTTATTATA  327
      || |||||||||||||| ||||||||||||||||||||| ||||||||||
seq2  AT-AAAGATAAAACTGACCTCCAAGAAGATGATCTGGACAACTTATTATA  346

seq1  AAGTCGCATTTATGGAAGGATTATGGAGCATCTG-AAATAATGTCTGACA  376
      ||||||| |||||||||||||||||||||||||| |||||||||||||||
seq2  AAGTCGC-TTTATGGAAGGATTATGGAGCATCTGAAAATAATGTCTGACA  395

seq1  CATAAGAAGTAACCACAGATATTAACTGAGATGATCAACCCAGAGTGTA-  425
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  CATAAGAAGTAACCACAGATA-TAACTGAGATGATCAACCCAGAGTGTAC  444

seq1  CCACAGCATAGTCTAGTC-TTTTATGGGAGGCAATGCAGTTAAATCAGGG  474
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCACAGCATAGTCTAGTCTTTTTATGGGAGGCAATGCAGTTAAATCAGGG  494

seq1  TGCTTCGGAATATATCATTTCACTGTCCTGCTGAGAGTTTGACATCTGGA  524
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCGGAATATATCATTTCACTGTCCTGCTGAGAGTTTGACATCTGGA  544

seq1  CGCTGTTTACTTGGCATCC-AATCTTGGTTCAATTACTTTCTAACTCTGA  573
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CGCTGTTTACTTGGCATCCAAATCTTGGTTCAATTACTTTCTAACTCTGA  594

seq1  GGGATTGTTGCTTTAACAC-TTTCAGATAGAGTAAATATTGTCTTTTCTC  622
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGGATTGTTGCTTTAACACTTTTCAGATAGAGTAAATATTGTCTTTTCTC  644

seq1  TGGGTTATAAAACATATAAAATTATGTCACACACATGTAACTTATGTGAC  672
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTATAAAACATATAAAATTATGTCACACACATGTAACTTATGTGAC  694

seq1  ATATTTATATACGTACAATTATCTACTTGTCAGTATCTACTCAGGAAATT  722
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATATACGTACAATTATCTACTTGTCAGTATCTACTCAGGAAATT  744

seq1  ATAATACTATCTACATAAGTATTGTGCTAACAGTTCATGAAACAGACAAA  772
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACTATCTACATAAGTATTGTGCTAACAGTTCATGAAACAGACAAA  794

seq1  GGGAGGGCAGAGAAACCAAAGAATAGGTGTGGAGAGATATCTTTGAAGAC  822
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGCAGAGAAACCAAAGAATAGGTGTGGAGAGATATCTTTGAAGAC  844

seq1  AACAGAGTTAGCAAAGCAACACAACCTTCAAGGAAGGGCAAGGGTGGGAG  872
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGTTAGCAAAGCAACACAACCTTCAAGGAAGGGCAAGGGTGGGAG  894

seq1  ATCTTGGGATGGCTCATGAGGGGTGTTCTATAGGGCACACCGAGTCTGTA  922
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGGATGGCTCATGAGGGGTGTTCTATAGGGCACACCGAGTCTGTA  944

seq1  TCCATGGAGACCTGCTGATTTAAAGGTGACTGCTGCCATCCAAGACCAAC  972
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGAGACCTGCTGATTTAAAGGTGACTGCTGCCATCCAAGACCAAC  994

seq1  AAAAAGAGAAATGTTGCAACTTCAATTTCCCTGCTGCCCCCTAATCTTAC  1022
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAGAAATGTTGCAACTTCAATTTCCCTGCTGCCCCCTAATCTTAC  1044

seq1  ACCAGTGCCTCCTCTTGGTTGAATTTGGCCAGATACCAGCTGAAGCAGGA  1072
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGCCTCCTCTTGGTTGAATTTGGCCAGATACCAGCTGAAGCAGGA  1094

seq1  GAATTC  1078
      ||||||
seq2  GAATTC  1100

seq1: chr16_85825145_85825756
seq2: B6Ng01-081B24.g_70_687

seq1  GAATTCTGAACAGAACCAATTTGATCCTGGATTTGTTTTTGTTTTGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAACAGAACCAATTTGATCCTGGATTTGTTTTTGTTTTGAATA  50

seq1  TTTTCCCATATGTGTATATATACATATATATATATATCTCATATACAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCATATGTGTATATATACATATATATATATATCTCATATACAGGT  100

seq1  GTATTTTTTTGTTTCTAGTTCATTGATCTCAGATCTGTTTATTTCTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTTTGTTTCTAGTTCATTGATCTCAGATCTGTTTATTTCTTCCT  150

seq1  ATCTACTTTATTTTTGGTGTTATTTGTTCTCTATTATCTAGCACATTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTTTATTTTTGGTGTTATTTGTTCTCTATTATCTAGCACATTCAA  200

seq1  GCATATCATTGAGTTGTTAACATTAGATCTCTTTAACTTTTGAGGTAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATCATTGAGTTGTTAACATTAGATCTCTTTAACTTTTGAGGTAGGC  250

seq1  ACTTAGTGCTATGAACTTGCCTTTTCGAACTGCCCTGTGCCCATAGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTGCTATGAACTTGCCTTTTCGAACTGCCCTGTGCCCATAGGTTT  300

seq1  GTGTATGCTGTGTAACATTCTGGTCTAATCTGTGTGATCTAATCTGATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGCTGTGTAACATTCTGGTCTAATCTGTGTGATCTAATCTGATGG  350

seq1  GCCGTGGACCAGAAGAATGGTGTTTGGGATCACTGTGGATTTTAGCCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGGACCAGAAGAATGGTGTTTGGGATCACTGTGGATTTTAGCCCTC  400

seq1  AGATCCCAACAGTCCTCTGTTTGAAG-TTCTGTTTGGAGCTCTGGGTTAA  449
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGATCCCAACAGTCCTCTGTTTGAAGTTTCTGTTTGGAGCTCTGGGTTAA  450

seq1  GGATTAAGGAGTACCAGGTAAATGAAGTGGGTGGGGCGGTTGATAGGCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAGGAGTACCAGGTAAATGAAGTGGGTGGGGCGGTTGATAGGCTG  500

seq1  CCAG-TTAGGAGAGAGGGATTGATTCTAAGCAAGACATGAGGTCCAGTTC  548
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTAGGAGAGAGGGATTGATTCTAAGCAAGACATGAGGTCCAGTTC  550

seq1  CACG-AAGGATAGTAGAGTATACTGAC-TTTTTTTCCTGGATTGCAGT-G  595
      |||| |||||||||||||||||||||| |||||||||||||||||||| |
seq2  CACGAAAGGATAGTAGAGTATACTGACTTTTTTTTCCTGGATTGCAGTGG  600

seq1  AATCTT-AAGATGGAGGA  612
      |||||| |||||||||||
seq2  AATCTTAAAGATGGAGGA  618