BAC Information

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BAC

Clone NameB6Ng01-081L15
Chromosome16 (Build37)
Map Location 62,654,027 - 62,654,676
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1, Epha3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081L15.bB6Ng01-081L15.g
ACCDH896489DH896490
length6531,241
definitionDH896489|Mus musculus domesticus DNA, BAC clone: B6Ng01-081L15, 5' end.DH896490|Mus musculus domesticus DNA, BAC clone: B6Ng01-081L15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatagcctgaaaattttatcaatacatagaagtactgaaaacag
caattgaggaatatcctgcgtgctaaaacttagtgcttcaaatgccacaa
tgaaaacctagttatctatgacttgaggtttttaaaaggaactgattatt
gtactattgccacaccccttatgtgactccaagcagtgtaatgacaggac
acatgatcttctaagctgtgcttctcagctttgcatcctgtcctggattt
tgcagactgacaagaagagaagtagcaatgtgtgcattgtgagttgatgc
tgccattgttccctcccccttccctcttcccctccctctctccctcttcc
cctctccctccctctcctccttttccctccttccctctctccctcttctt
ttccttctccctccctccctctctccctcttcttctccctccctccctcc
cttcccctccctttcactccctctctccctcttcttttcactctccctcc
ctcactctttccctcttcttctccctctccctccctcacgctttccctct
tcttctctctctctctctctctctctctatcgaggtctctgacacacctc
catcttcttgaccattcttaaagcttgtcgggcagaaatttttacttttt
ttt
gaattcagtcctgtatttcatccactgttctgtagctgactgactaccta
ttgtgacctcactacgctctctgtacccattcccaaagaactgaacagat
cacagtggaacaccatgttttccttcttccctcctcctgtggatcctgtc
agccctccccctaagcacatttccattcctgtcagctcccaataactaga
aacacatatagggaattgccagtggtcacacctaccaggattccagaaga
actccctaccaaaccactagacacttacaagaaccaaagaggacaacaaa
ccaaagaacacaaaatacccacccaacaatgaaaagagcaaagatcagca
cctagaattacaaacttcccaaatgaagacacctagatgccagcacaaaa
acacaatcaaaacagtgaggaaattatgtctcccctaaagcccagcaatt
ctactcaagtaggccctgtgaattgcaatatagatgaaaaccaagataag
gaccttagccttcataaatatgatagaggtcctcaaagaggaaagtaatt
aattaatcctttaaagaaatctgtgaaaactctgaccagcagagaaggga
aaagaataaaacagtctgtggcctaacaatggaaaatgaatcaagaagaa
atacaacacacactgagagtaatctgggaaagaaaaatttggaagcttga
gtagaaaccgcagaggcaagtctcaccaacatgatatgagagatgtaaga
gagaatctccgtcattgatgaaacaatagaagaagagattgacactttgg
tcagagaaactgttaaatctaaatatatacatacaacatccaggaaatct
gggatactatggaaagagcaaacctaggattagtaggatagaggaagaag
aaactcatgtcaaagtacagaaaaaaaatttaaaattcatataagaaaat
tttcccacttaagaagagatgcctatcgaggcagacgagtaccacataga
cccaaatagactggactaagagagaaattctccttggttactattagttc
aaaacaataactaataccactgacagttacttgcaaagtagcaaggttca
aaattaacttcattaagattggtactttcttatatccaaatgagcatcga
aaacaaacctttcaaaggctcttgatacaatattgagtatcctactcagt
cgacagagttgtttaaatttggccttggagaaaaaaaaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_62654027_62654676
seq2: B6Ng01-081L15.b_44_696 (reverse)

seq1  -AAAAAAA--AAAAAATACTGCCTGACAAGCTTTAAGAATGGTCAAGAAG  47
       |||||||  ||||| | ||||| ||||||||||||||||||||||||||
seq2  AAAAAAAAGTAAAAATTTCTGCCCGACAAGCTTTAAGAATGGTCAAGAAG  50

seq1  ATGGAGGGGTGTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  97
      ||||||| ||||||||||    || |||||||||||||||||||||||||
seq2  ATGGAGGTGTGTCAGAGACCTCGATAGAGAGAGAGAGAGAGAGAGAGAGA  100

seq1  AGAAGAGGGAAAGAGTGAGGGAGGGAGAGGGAAAAGAAGAGGGAAAGAGT  147
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  AGAAGAGGGAAAGCGTGAGGGAGGGAGAGGGAGAAGAAGAGGGAAAGAGT  150

seq1  GAGGGAGGGAGAGTGAAAAGAAGAGGGAGAGAGGGAGTGAAAAGGAGGGG  197
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAGGGAGGGAGAGTGAAAAGAAGAGGGAGAGAGGGAGTGAAAGGGAGGGG  200

seq1  AAGGGAGGGAGGGAGGGAGAAGAAGAGGGAGAGAGGGAGGGAGGGAGAAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGGAGGGAGGGAGAAGAAGAGGGAGAGAGGGAGGGAGGGAGAAG  250

seq1  GAAAAGAAGAGGGAGAGAGGGAAGGAGGGAAAAGGAGGAGAGGGAGGGAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAGAGGGAGAGAGGGAAGGAGGGAAAAGGAGGAGAGGGAGGGAG  300

seq1  AGGGGAAGAGGGAGAGAGGGAGGGGAAGAGGGAAGGGGGAGGGAACAATG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAGAGGGAGAGAGGGAGGGGAAGAGGGAAGGGGGAGGGAACAATG  350

seq1  GCAGCATCAACTCACAATGCACACATTGCTACTTCTCTTCTTGTCAGTCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATCAACTCACAATGCACACATTGCTACTTCTCTTCTTGTCAGTCT  400

seq1  GCAAAATCCAGGACAGGATGCAAAGCTGAGAAGCACAGCTTAGAAGATCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATCCAGGACAGGATGCAAAGCTGAGAAGCACAGCTTAGAAGATCA  450

seq1  TGTGTCCTGTCATTACACTGCTTGGAGTCACATAAGGGGTGTGGCAATAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCTGTCATTACACTGCTTGGAGTCACATAAGGGGTGTGGCAATAG  500

seq1  TACAATAATCAGTTCCTTTTAAAAACCTCAAGTCATAGATAACTAGGTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATAATCAGTTCCTTTTAAAAACCTCAAGTCATAGATAACTAGGTTT  550

seq1  TCATTGTGGCATTTGAAGCACTAAGTTTTAGCACGCAGGATATTCCTCAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTGGCATTTGAAGCACTAAGTTTTAGCACGCAGGATATTCCTCAA  600

seq1  TTGCTGTTTTCAGTACTTCTATGTATTGATAAAATTTTCAGGCTATAGAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTTTTCAGTACTTCTATGTATTGATAAAATTTTCAGGCTATAGAA  650

seq1  TTC  650
      |||
seq2  TTC  653