BAC Information

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BAC

Clone NameB6Ng01-081N21
Chromosome16 (Build37)
Map Location 27,852,786 - 27,853,937
singlet/doubletsinglet
Overlap genenone
Upstream geneGm606, Ostn, Uts2d, Ccdc50
Downstream geneFgf12, 1600021P15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081N21.bB6Ng01-081N21.g
ACCDH896591DH896592
length1,1371,228
definitionDH896591|Mus musculus domesticus DNA, BAC clone: B6Ng01-081N21, 5' end.DH896592|Mus musculus domesticus DNA, BAC clone: B6Ng01-081N21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattacataggcaaaaagaaaacaagaaaaaagacactgcaaga
atacttcacaaaatgtcaaccacctccttaatcagagaaatgcaaattat
accacagtgaattatcaatataatgagtctgatgagaagtaaaaacagaa
catttaacaagtgttagaactaacagagatattttacactgtgtgtttgg
cttcagtgtaagtatcaaaaatgactcatggaaaatggaagtgctttttt
tttttttattaaaaaggacccacttttcagtccttgggatatcctgaagg
aacacttggttcttttttttttttttttttttctgttttgtttttcgaga
cagggtttctctgtatagccctggttatcctggaactcactttgtagacc
aggctggcctcgaactcagaaatccacctgcctctgcctcccaagtgctg
gaattaaaggtgtgcaccaccacgctcagctgaacacttgattcttatgc
ccattaaaaaaatgttatccataaacatggcaccatcattccaaagagct
agcagtttaccctacatcttgaaggcaacaaatgccctgtgctgtcaaca
cttaataaggtgatgtgtagttgtgtaagcaggtcttccccttattataa
tttcaaatgcttccaagggaagtctcagaagttacaagaagctttcagtg
gagtttcacccctagcagttgcatatcacagaagttcaagtagattgcac
atatatttatgtgtacatagacacacacatatatttataggtgtatgtgt
acatatgtaccagttgtatcagcttcaaggcattaaaaacttttgagttg
ttaatttcattcattcatttaaatgtgatcaaaccatctctgttcataag
tttattgcctttgggctcaagtgtgttcatataattcttcccaaaatgga
tttagaagtagcaagctgtagactaaatccctgaacttcctggtggggta
taggactgtccttatttagatgagtctattgactcctccgggttaattga
atatttttaagagaattcattccactgaatggctggcacccctggacaga
gttgggtagcattgaaatcatacctttatcaccgcac
gaattccacagccatttccacagcacctagaggaggctcaaatcccaggt
gctgcaacacaactaggaccaaggatcccaggatctcaggagcttgatca
caccagaatatcaaggtcccagaggcaacttgaatcccaggaattctaat
actcctagaatctcagggatcacaggatcctggaaccgcagtaccacaga
gtcagctggactctgaggagttctgactcaactaggattataggaaggac
aggctccagtcagatatagcaagggcaggtagcactagagataatcagat
agtaggaggcaagcataagaacataagcaacagaaaccaaggttacttgg
catcatcacaacccaactctcccaccctagcaagtcctggatataccatc
acactggaaaagcaagattcagatctaaaatcacctctcatgatgataga
ggactttaagaaggacataagtaattcccttggaaaaaaatatagggaaa
cacaggtaaacagctagaagcccttaaagagggaacacaaaaatccctta
aagagttacaggaaaacacaatcaaataggcaaaggaaaggaacaaaacc
atccaggatccaaaaatggaactaaaatcaataaagaaatcacaaaggga
gacaattctggagttacaaaaacctaggaacgagatcaggagtcatagat
gcaaatgtaaccaacagaatacaagagatagatgagaaaatctcaggggt
agaagatgccatagaaaacatttgacccagcagtcaaataaaatgcaaag
tgcaaaaagctcctaactcaaaacttccaggaaatccagaacacaatgag
aagaagaaacctatggatgatagttatagaagagagcaaagattcccaac
ttaaggggtcagtaaatatcttcaacaaaattgtagaagaaaaggtccct
aatctaaagaaagaaatgcccatgaacatacaaggaggctacaaaactcc
aagtagactggaccagaaaataaatttcccctgtccatggtattcggaac
aacaatgcctttaacaaggaaggatattagagctacgtaaaatttaaaag
tagggaaagatcaggtaactttaaggagaccttcggaattaccggactct
ccacgaggctatgaaaggctaggagatactcccgaccgataggaacatct
atgtagtaggcgcgtaccgacctgccgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_27852786_27853937
seq2: B6Ng01-081N21.b_48_1184

seq1  GAATTCAATTACATAGGCAAAAAGAAAACAAGAAAAAAGACACTGCAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTACATAGGCAAAAAGAAAACAAGAAAAAAGACACTGCAAGA  50

seq1  ATACTTCACAAAATGTCAACCACCTCCTTAATCAGAGAAATGCAAATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCACAAAATGTCAACCACCTCCTTAATCAGAGAAATGCAAATTAT  100

seq1  ACCACAGTGAATTATCAATATAATGAGTCTGATGAGAAGTAAAAACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGTGAATTATCAATATAATGAGTCTGATGAGAAGTAAAAACAGAA  150

seq1  CATTTAACAAGTGTTAGAACTAACAGAGATATTTTACACTGTGTGTTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAACAAGTGTTAGAACTAACAGAGATATTTTACACTGTGTGTTTGG  200

seq1  CTTCAGTGTAAGTATCAAAAATGACTCATGGAAAATGGAAGTGCTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTGTAAGTATCAAAAATGACTCATGGAAAATGGAAGTGCTTTTTT  250

seq1  TTTTTTTATTAAAAAGGACCCACTTTTCAGTCCTTGGGATATCCTGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTAAAAAGGACCCACTTTTCAGTCCTTGGGATATCCTGAAGG  300

seq1  AACACTTGGTTCTTTTTTTTTTTTTTTTTTTTCTGTTTTGTTTTTCGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTGGTTCTTTTTTTTTTTTTTTTTTTTCTGTTTTGTTTTTCGAGA  350

seq1  CAGGGTTTCTCTGTATAGCCCTGGTTATCCTGGAACTCACTTTGTAGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTCTCTGTATAGCCCTGGTTATCCTGGAACTCACTTTGTAGACC  400

seq1  AGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTG  450

seq1  GAATTAAAGGTGTGCACCACCACGCTCAGCTGAACACTTGATTCTTATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAAGGTGTGCACCACCACGCTCAGCTGAACACTTGATTCTTATGC  500

seq1  CCATTAAAAAAATGTTATCCATAAACATGGCACCATCATTCCAAAGAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAAAAAAATGTTATCCATAAACATGGCACCATCATTCCAAAGAGCT  550

seq1  AGCAGTTTACCCTACATCTTGAAGGCAACAAATGCCCTGTGCTGTCAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTTACCCTACATCTTGAAGGCAACAAATGCCCTGTGCTGTCAACA  600

seq1  CTTAATAAGGTGATGTGTAGTTGTGTAAGCAGGTCTTCCCCTTATTATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATAAGGTGATGTGTAGTTGTGTAAGCAGGTCTTCCCCTTATTATAA  650

seq1  TTTCAAATGCTTCCAAGGGAAGTCTCAGAAGTTACAAGAAGCTTTCAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATGCTTCCAAGGGAAGTCTCAGAAGTTACAAGAAGCTTTCAGTG  700

seq1  GAGTTTCACCCCTAGCAGTTGCATATCACAGAAGTTCAAGTAGATTGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCACCCCTAGCAGTTGCATATCACAGAAGTTCAAGTAGATTGCAC  750

seq1  ATATATTTATGTGTACATAGACACACACATATATTTATAGGTGTATGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTATGTGTACATAGACACACACATATATTTATAGGTGTATGTGT  800

seq1  ACATATGTACCAGTTGTATCAGCTTCAAGGCATTAAAAACTTTTGAGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGTACCAGTTGTATCAGCTTCAAGGCATTAAAAACTTTTGAGTTG  850

seq1  TTAATTTCATTCATTCATTTAAATGTGATCAAAACCATCTCTGTTCATAA  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTAATTTCATTCATTCATTTAAATGTGATC-AAACCATCTCTGTTCATAA  899

seq1  GTTTATTGCCTTTGGGCTCAAGTGTGTTCATATAATTCTTCTCAAAATGG  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTTTATTGCCTTTGGGCTCAAGTGTGTTCATATAATTCTTCCCAAAATGG  949

seq1  ATTTAGAAGTAGCAAGCTGTAGGACTAAATCCTTGAACTTCCT-GTTGTG  999
      ||||||||||||||||||||| |||||||||| |||||||||| || | |
seq2  ATTTAGAAGTAGCAAGCTGTA-GACTAAATCCCTGAACTTCCTGGTGGGG  998

seq1  TATAGTACTGT-CTTATTTAGATGAGTTTCTATTGACTCTTCAGTGTTTT  1048
      ||||| ||||| ||||||||||||||  ||||||||||| || | |||  
seq2  TATAGGACTGTCCTTATTTAGATGAG--TCTATTGACTCCTCCGGGTT--  1044

seq1  AATTTGAATTATTTTTTAAGGAGAATTCATTCCACTTGAGATGCATAGGC  1098
       | ||||| |||||||  | ||||||||||||||| ||| |||  | |||
seq2  -AATTGAA-TATTTTT--AAGAGAATTCATTCCAC-TGA-ATGGCT-GGC  1087

seq1  ACTCCTGGACAGTAGTTTGGTTAGCATTTGAAATCATACCTTTAATCACA  1148
      || ||||||||| || |||| ||||| |||||||||||||||| ||||| 
seq2  ACCCCTGGACAG-AG-TTGGGTAGCA-TTGAAATCATACCTTT-ATCACC  1133

seq1  GCAC  1152
      ||||
seq2  GCAC  1137