BAC Information

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BAC

Clone NameB6Ng01-084H09
Chromosome16 (Build37)
Map Location 55,386,284 - 55,386,834
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043449, LOC667927, LOC436421, Zpld1
Downstream geneNfkbiz, Gm1752, Lrriq2, EG667966, LOC629242, Rpl24, Zbtb11, Pcnp, Rg9mtd1, Senp7, Impg2, LOC672835
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084H09.bB6Ng01-084H09.g
ACCDH898411DH898412
length1,276989
definitionDH898411|Mus musculus domesticus DNA, BAC clone: B6Ng01-084H09, 5' end.DH898412|Mus musculus domesticus DNA, BAC clone: B6Ng01-084H09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagtcttgacttccttggtgatgaacagcagtatggaagtgtaa
gttaaataaaccctttcctcaccaacttgcttctttgtaatgatgttttg
tccaggaatagaaaccctgactaagacaaattgaccttagtacaaggaga
taggaatggatcaattcgcattcttctacatgataacaaccagttgtgcc
agcaccatttgttgaaaatgctgtcttttttccactggatggttttagct
cccttgtaaaagatcaagtgaccataggtgtgtgggttcatttctgggtc
ttcaattctattccattggtctacttttctgtcactataccagtaccatg
ccgtttttatcacaattgctctgtagtacagctttaggtcaggcatggtg
attccaccagaggttctgttatccttgagatgagtttttgctatcctaga
ttttttgttatttcagatgaatttgcagattgctctttctaattcattga
agaattgagttggaaatttgatggggattgcattgaatctgtagattgct
tttggcaagatagccatttttacaatgttgatcctgccaatccatgagca
tgggagatctttccatcttctgagatcttctttaatttctttcttagaag
acttgaatttcttatcatacagatctttcacttccttagttagagtcaga
ccaaggtattttatattatttgtgactattgagaagggtgttgtttccct
aatttctttctcagcctgtttatcctttgtgtacagaaatgtcattgact
tgtttgagttattttatatccagctacttcattgaagctgttatcagttt
aggagttctctggtggaatttttagggtcacttatatatactatcatatc
atctgcaaaaagtgatattttgacttcttcctttccaatttgtatcccct
tgatctccttttgttgtcggattgctctggctaggacttcaagtacatgt
tggaataggtagggagaaagtggacagccgttgtctagtccctgattttg
tgggattgcttccagcttcccaccatttactttgatgtgggctactggtt
tgctgtaggatggcttttatcatggttagggtttgggctggatctctgat
cttttcaggacttttatacatgatgggttgttggaattggccaatggctt
tcgcactgaacggaagaattctgtggttttgctttgaggtgtgtaatatt
ggcctatgtatgtgagggaggttcta
gaattcctggaatgaaacctacttggtcaggatggatgattgctttgatt
tgttcttggattctgttagtgagaattttattgagtaattttgcatcaat
attcataagggaaattgctctgaagttctctaactttgttgggtctttct
gtggcttaggtgtcagagtaattgtggctacataaaatggattgggtaga
gtaccttctgtttctattttgtggaatagtttctgaggaagtagaattag
atcttctttgaaggtctgatagaactttgcactaaacccatctggtcctg
ggcttttttggttaggagaatattaatgattgcttctatttcttcagggg
atataggaccgtttagatcattaatctgatcctggtttaactttggtacc
tggtatctgtctagaaatttttccatttcatccaggttttccagttttgt
tgagtataaccttttgtagaaggatctgatggtgttttggatttcttcag
gatctgttgttatatctctctttttatttctgattttgttaattaggatg
ctgtccctgtgccctctagtgagtctggctaagggtttatctatcttgtt
gattttctcaaagaaccagctcctcgattggttgattctttgaatagttc
ttctttttttcctcttggttgatttcacccctgagttttgattatttcct
gctgtctactcctcatgggttgaatttgcttcattttgttctagagcttt
ttaggtgtgttgttcaagctgtttagtgtgtgctctctcttgtttcttct
tggaggcactcataaactatgagttttcatcttagaaatgctttctttgt
gtcccataagtttgggtatgttgtggcttctttttcattaaactctaaaa
agtcttaatttcttttgttatttctctttgaccaagtgtcattgagtaga
gtgtgttcagttccacgtgaatgtggtttctattattaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_55386284_55386834
seq2: B6Ng01-084H09.g_504_1057 (reverse)

seq1  TAAATAATAGAAAGCCAACATTCACGTGGAAACTGAACAACACTCTGCTC  50
      | |||||||||||  | |||||||||||| |||||||| ||||||| |||
seq2  TTAATAATAGAAA--CCACATTCACGTGG-AACTGAAC-ACACTCTACTC  46

seq1  AATGACACCTTGGTCAAGGAAGGAAT----AAAGAAATTAAGGACTTTTT  96
      ||||||| ||||||||| | || |||    ||||||||||| ||||||||
seq2  AATGACA-CTTGGTCAAAG-AGAAATAACAAAAGAAATTAA-GACTTTTT  93

seq1  AGAGTTCAATGAAAATGAAGCCACAACATACCCAAACTTATGGGACACAA  146
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  AGAGTTTAATGAAAAAGAAGCCACAACATACCCAAACTTATGGGACACAA  143

seq1  TGAAAGCATTTCTAAGAGGAAAACTCATAG-CTCTGAGTGTCTCAAAAAA  195
       |||||||||||||||| ||||||||||||  | |||||| |||   || 
seq2  AGAAAGCATTTCTAAGATGAAAACTCATAGTTTATGAGTGCCTC--CAAG  191

seq1  AAGAAACTAGAGAGAGCACACACT-AGCAGCTTG-ACAACACACCT-AAA  242
      ||||||| |||||||||||||||| | ||||||| ||||||||||| |||
seq2  AAGAAACAAGAGAGAGCACACACTAAACAGCTTGAACAACACACCTAAAA  241

seq1  AGCTCTAGAACAAAAGGAAGCAAATTC-ACCCAAGAGGAGTAGAAGGCAG  291
      ||||||||||||||| ||||||||||| ||||| ||||||||||  ||||
seq2  AGCTCTAGAACAAAATGAAGCAAATTCAACCCATGAGGAGTAGACAGCAG  291

seq1  GAAATAATC-AAACTCAGGGGCGAAATCAACCAAGTGG-AAACAAGAAGA  339
      ||||||||| ||||||||||| ||||||||||||| || ||| |||||||
seq2  GAAATAATCAAAACTCAGGGGTGAAATCAACCAAGAGGAAAAAAAGAAGA  341

seq1  ACTATTCAAAGAATCAACCAAATGAGGAGCTGGTTCTTTGAGAAAATCAA  389
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  ACTATTCAAAGAATCAACCAATCGAGGAGCTGGTTCTTTGAGAAAATCAA  391

seq1  CAAGATAGATAAACCCTTAGCCAGACTCACTAGAGGGCACAGGGACAGCA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATAGATAAACCCTTAGCCAGACTCACTAGAGGGCACAGGGACAGCA  441

seq1  TCCTAATTAA-AAAGTCAGAAATGAAAAGGGAGACATAACAACAGATCCT  488
      |||||||||| ||| |||||||| ||||| |||| |||||||||||||||
seq2  TCCTAATTAACAAAATCAGAAATAAAAAGAGAGATATAACAACAGATCCT  491

seq1  GAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAAC  538
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGTTATACTCAAC  541

seq1  AAAACTGGAGAAC  551
      ||||||||| |||
seq2  AAAACTGGAAAAC  554