BAC Information

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BAC

Clone NameB6Ng01-085H08
Chromosome16 (Build37)
Map Location 79,868,706 - 80,026,597
singlet/doubletdoublet
Overlap geneEG383172, 1700066C05Rik
Upstream geneChodl, Prss7
Downstream geneLOC621365, LOC100039724
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085H08.bB6Ng01-085H08.g
ACCDH899124DH899125
length1,1191,079
definitionDH899124|Mus musculus domesticus DNA, BAC clone: B6Ng01-085H08, 5' end.DH899125|Mus musculus domesticus DNA, BAC clone: B6Ng01-085H08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,025,463 - 80,026,597)(79,868,706 - 79,869,709)
sequence
gaattctacaaggaatgtaatagatttttaaaattctaggttgaaataaa
gataaaacaaaggctgagagttgattcgtaatactttgcccagtgatgat
atttttagaaatctctttgagagaactctttccatgtgactagtggtttg
ggggaatttacaaccttgggattcattgtagagtgtgagacaaaaatgag
gcataaagaatgtagaattaagtgtctgtcttctatgcttttattttcaa
tacacatgagaaacagagaaaatagacaaaaattaacatactaagcatga
aattttagtatgaggttccattctcttgagaaaagattattataattttc
ttattaaaggggaattttcaatataaagcctgcaatacatgtcaaactct
tttaataatgggagatacttaaaaagactttaaaaataccaattcccctg
aaatttcttcaaaccgaatgagaaggaatttgcatgagaagcagtgaggc
aaattatactcgctaacttaacatcccaggtttttttttttttttattaa
tttcaattttgaggaatatagaaaaatgtgatttctatttcatcactgaa
cagaacacgccattttactcgagtcttttatgttgatatcacaggaccac
atggctgctattaaatatatatcttttagataatgtatgggattttgagg
aattcctgctagatagttcattatttaaaaatggatattctggaactaaa
aagatagttcaatgaggaagagcttttactgttcttctcgacttgagtta
tgtcctagcaacacgtttcatggtctaccactccctgtctctccaatggc
acagaatcatatgtatttatcagtcttcactggtacaatcccacacttgg
tgcatgtacacgtgcacacaaacacataaataattggtaaaataaaacaa
aagtttcacattatatatttaaaatatattacttggtagattttaaaatc
ttatttcatttagatcttgtaattgtatgacatgcttctaaagttgattt
ttaataatacctatagtagctttttatctagattgatcatgatttcggac
atttcagcctcagaggttg
gaattccatcactcagaataaattttgccagtttcatccatttttctctg
tatgtttctggaaggttctgttcggggctttgcaggagaaaaatcatcag
gctcacagcagcattaatcctgtatgtgatagtagtaaaatgtcagacaa
gatgtgcccactggtacaatcattgaattaacttttgtggtacaaccatt
gcttccagttctggggtaaggtctgctttactgaagggaatccaagctgg
acattgttaaaatgggcaatagcctaaagatgtggagataacagatccca
tggtaaaacccactactcatgttttatcaaactgacatgcagttaaactg
ccttctagacattccctaagagcattagagtatctcttagcattgatcag
agatttttttttccacaatagcaatggctcataatagtagtagggcctca
taactgttccaagtgtttaaaataaatcattgttaaatattctggctcaa
atgaaacatcatcgtcaggacttccaaggtccagggaacatctcagaagg
ggaatagaaagaatgtgggagccagtagatggaatgagtaagataggtgc
tgtcacataggcatttcaggtgaaatcgtaaacatagagctgttgtgact
ttcattagtgggaaaaataaaagagaaggaaacagaaaaagatacaaaaa
gaacagagagacatgaatgtgggagaatgactgggaggagaaagggttgg
taggagttggatggagatgagacagagaggcagacgggatgaaaatgatc
actttagctctcaactgaattcacctcagggaaacttttcttgacatata
caactgacaaagaaagcactttactattgaaaatatactagatttgctta
ttagacaggaaaatgatttgataaaattcatagccttttgtgataaaagc
ataaattatgaatatgtcaaagtatctttttaatgataatgtctagacta
aatcgtagattctgatttcagatatgaatatgggaatttcctttaggtgt
acacctatttcttccgatcaaatataaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_80025463_80026597
seq2: B6Ng01-085H08.b_48_1166 (reverse)

seq1  CAACCTTCCTGA-GCTGAACATGTCTGAAATCATGATCAAATCTAGATTA  49
      ||||||  |||| |||||| ||||| |||||||||||| |||||||||  
seq2  CAACCT--CTGAGGCTGAA-ATGTCCGAAATCATGATC-AATCTAGAT--  44

seq1  AAAAAAGCTACTATAGGTATTATATAAAAATCAAACTTTTAGAAGCATGT  99
       |||||||||||||||||||||| ||||||||||   |||||||||||||
seq2  -AAAAAGCTACTATAGGTATTAT-TAAAAATCAA--CTTTAGAAGCATGT  90

seq1  CATACAATTTACAAAGATCTAAATGGAAATAAGATTTTAAAATCTTACCA  149
      ||||||| |||| ||||||||||| ||||||||||||||||||| |||||
seq2  CATACAA-TTAC-AAGATCTAAAT-GAAATAAGATTTTAAAATC-TACCA  136

seq1  AGTAATATATTTTTAAATATATAATGTGAAACTTTTGTTTTATTTTACCA  199
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATATA-TTTTAAATATATAATGTGAAACTTTTGTTTTATTTTACCA  185

seq1  ATTATTTATTGTGTTTGTGTGCACGTGTACATGCACCAAGTGTGGGATTG  249
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTA-TGTGTTTGTGTGCACGTGTACATGCACCAAGTGTGGGATTG  234

seq1  TACCAGTGAAGACCTGATAAATACATATGATTCTGTGCCATTGGAGAGAC  299
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TACCAGTGAAGA-CTGATAAATACATATGATTCTGTGCCATTGGAGAGAC  283

seq1  AGGGAGTGGTAGACCATGAAACGTGTTGCTAGGACATAACTCAAGTCGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTGGTAGACCATGAAACGTGTTGCTAGGACATAACTCAAGTCGAG  333

seq1  AAGAACAGTAAAAGCTCTTCCTCATTGAACTATCTTTTTAGTTCCAGAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGTAAAAGCTCTTCCTCATTGAACTATCTTTTTAGTTCCAGAAT  383

seq1  ATCCATTTTTAAATAATGAACTATCTAGCAGGAATTCCTCAAAATCCCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTTTTAAATAATGAACTATCTAGCAGGAATTCCTCAAAATCCCAT  433

seq1  ACATTATCTAAAAGATATATATTTAATAGCAGCCATGTGGTCCTGTGATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATCTAAAAGATATATATTTAATAGCAGCCATGTGGTCCTGTGATA  483

seq1  TCAACATAAAAGACTCGAGTAAAATGGCGTGTTCTGTTCAGTGATGAAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATAAAAGACTCGAGTAAAATGGCGTGTTCTGTTCAGTGATGAAAT  533

seq1  AGAAATCACATTTTTCTATATTCCTCAAAATTGAAATTAATAAAAAAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCACATTTTTCTATATTCCTCAAAATTGAAATTAATAAAAAAAAA  583

seq1  AAAAAACCTGGGATGTTAAGTTAGCGAGTATAATTTGCCTCACTGCTTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCTGGGATGTTAAGTTAGCGAGTATAATTTGCCTCACTGCTTCT  633

seq1  CATGCAAATTCCTTCTCATTCGGTTTGAAGAAATTTCAGGGGAATTGGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAAATTCCTTCTCATTCGGTTTGAAGAAATTTCAGGGGAATTGGTA  683

seq1  TTTTTAAAGTCTTTTTAAGTATCTCCCATTATTAAAAGAGTTTGACATGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAGTCTTTTTAAGTATCTCCCATTATTAAAAGAGTTTGACATGT  733

seq1  ATTGCAGGCTTTATATTGAAAATTCCCCTTTAATAAGAAAATTATAATAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAGGCTTTATATTGAAAATTCCCCTTTAATAAGAAAATTATAATAA  783

seq1  TCTTTTCTCAAGAGAATGGAACCTCATACTAAAATTTCATGCTTAGTATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTCAAGAGAATGGAACCTCATACTAAAATTTCATGCTTAGTATG  833

seq1  TTAATTTTTGTCTATTTTCTCTGTTTCTCATGTGTATTGAAAATAAAAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTTGTCTATTTTCTCTGTTTCTCATGTGTATTGAAAATAAAAGC  883

seq1  ATAGAAGACAGACACTTAATTCTACATTCTTTATGCCTCATTTTTGTCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGACAGACACTTAATTCTACATTCTTTATGCCTCATTTTTGTCTC  933

seq1  ACACTCTACAATGAATCCCAAGGTTGTAAATTCCCCCAAACCACTAGTCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTACAATGAATCCCAAGGTTGTAAATTCCCCCAAACCACTAGTCA  983

seq1  CATGGAAAGAGTTCTCTCAAAGAGATTTCTAAAAATATCATCACTGGGCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAAGAGTTCTCTCAAAGAGATTTCTAAAAATATCATCACTGGGCA  1033

seq1  AAGTATTACGAATCAACTCTCAGCCTTTGTTTTATCTTTATTTCAACCTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTACGAATCAACTCTCAGCCTTTGTTTTATCTTTATTTCAACCTA  1083

seq1  GAATTTTAAAAATCTATTACATTCCTTGTAGAATTC  1135
      ||||||||||||||||||||||||||||||||||||
seq2  GAATTTTAAAAATCTATTACATTCCTTGTAGAATTC  1119

seq1: chr16_79868706_79869709
seq2: B6Ng01-085H08.g_155_1147

seq1  AGAAAAATCATCAGGCTCACAGCAGCATTAATCCTGTATGTGATAGTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATCATCAGGCTCACAGCAGCATTAATCCTGTATGTGATAGTAGT  50

seq1  AAAATGTCAGACAAGATGTGCCCACTGGTACAATCATTGAATTAACTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTCAGACAAGATGTGCCCACTGGTACAATCATTGAATTAACTTTT  100

seq1  GTGGTACAACCATTGCTTCCAGTTCTGGGGTAAGGTCTGCTTTACTGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTACAACCATTGCTTCCAGTTCTGGGGTAAGGTCTGCTTTACTGAAG  150

seq1  GGAATCCAAGCTGGACATTGTTAAAATGGGCAATAGCCTAAAGATGTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCCAAGCTGGACATTGTTAAAATGGGCAATAGCCTAAAGATGTGGA  200

seq1  GATAACAGATCCCATGGTAAAACCCACTACTCATGTTTTATCAAACTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACAGATCCCATGGTAAAACCCACTACTCATGTTTTATCAAACTGAC  250

seq1  ATGCAGTTAAACTGCCTTCTAGACATTCCCTAAGAGCATTAGAGTATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTTAAACTGCCTTCTAGACATTCCCTAAGAGCATTAGAGTATCTC  300

seq1  TTAGCATTGATCAGAGATTTTTTTTTCCACAATAGCAATGGCTCATAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATTGATCAGAGATTTTTTTTTCCACAATAGCAATGGCTCATAATA  350

seq1  GTAGTAGGGCCTCATAACTGTTCCAAGTGTTTAAAATAAATCATTGTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAGGGCCTCATAACTGTTCCAAGTGTTTAAAATAAATCATTGTTAA  400

seq1  ATATTCTGGCTCAAATGAAACATCATCGTCAGGACTTCCAAGGTCCAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTGGCTCAAATGAAACATCATCGTCAGGACTTCCAAGGTCCAGGG  450

seq1  AACATCTCAGAAGGGGAATAGAAAGAATGTGGGAGCCAGTAGATGGAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTCAGAAGGGGAATAGAAAGAATGTGGGAGCCAGTAGATGGAATG  500

seq1  AGTAAGATAGGTGCTGTCACATAGGCATTTCAGGTGAAATCGTAAACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGATAGGTGCTGTCACATAGGCATTTCAGGTGAAATCGTAAACATA  550

seq1  GAGCTGTTGTGACTTTCATTAGTGGGAAAAATAAAAGAGAAGGAAACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTTGTGACTTTCATTAGTGGGAAAAATAAAAGAGAAGGAAACAGA  600

seq1  AAAAGATACAAAAAGAACAGAGAGACATGAATGTGGGAGAATGACTGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATACAAAAAGAACAGAGAGACATGAATGTGGGAGAATGACTGGGA  650

seq1  GGAGAAAGGGTTGGTAGGAGTTGGATGGAGATGAGACAGAGAGGCAGACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGGGTTGGTAGGAGTTGGATGGAGATGAGACAGAGAGGCAGACG  700

seq1  GGATGAAAATGATCACTTCAGCTCTCAACTGAATTCACCTCAGGGAAACT  750
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGATGAAAATGATCACTTTAGCTCTCAACTGAATTCACCTCAGGGAAACT  750

seq1  TTTCTTGACATATACAACTGACAAAGAAAGCACTTTACTATTGAAAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGACATATACAACTGACAAAGAAAGCACTTTACTATTGAAAATAT  800

seq1  ACTAGATTTGCTTATTAGACAGGAAAATGATTTGATAAAATTCAATAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACTAGATTTGCTTATTAGACAGGAAAATGATTTGATAAAATTC-ATAGCC  849

seq1  TTTTGTGATAAAAGCAATAAATTATGAATATGTCAAAGTATCCTTTATAA  900
      ||||||||||||||| ||||||||||||||||||||||||| |||| |||
seq2  TTTTGTGATAAAAGC-ATAAATTATGAATATGTCAAAGTAT-CTTTTTAA  897

seq1  TGAATAAATGTCTAGACTAAATCGTAGAAATTCTGATTTCAGATATTGAA  950
      |||   |||||||||||||||||||||  |||||||||||||||||   |
seq2  TGA--TAATGTCTAGACTAAATCGTAG--ATTCTGATTTCAGATAT--GA  941

seq1  ATATTGGAATTTCCTTTAAGTTGTAACAACTATTTCTTCCAGTCAATTAT  1000
      |||| |||||||||||| || ||| ||| |||||||||||  |||| |||
seq2  ATATGGGAATTTCCTTT-AGGTGT-ACACCTATTTCTTCCGATCAAATAT  989

seq1  AAAC  1004
      ||||
seq2  AAAC  993