BAC Information

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BAC

Clone NameB6Ng01-086D15
Chromosome16 (Build37)
Map Location 95,439,361 - 95,569,851
singlet/doubletdoublet
Overlap geneKcnj15
Upstream geneHlcs, LOC622832, LOC100040857, Dscr6, LOC545178, Pigp, Ttc3, Dscr3, Dyrk1a, Kcnj6, LOC666201
Downstream geneErg, Ets2, LOC625548, LOC100040997, Dscr2, Brwd1, LOC100041318, Hmgn1, Wrb, 4921526F01Rik, Sh3bgr, B3galt5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086D15.bB6Ng01-086D15.g
ACCDH899681DH899682
length4731,128
definitionDH899681|Mus musculus domesticus DNA, BAC clone: B6Ng01-086D15, 5' end.DH899682|Mus musculus domesticus DNA, BAC clone: B6Ng01-086D15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,439,361 - 95,439,839)(95,568,715 - 95,569,851)
sequence
ctttctgtgggacaggcctcaatccaatcataagagcagaggttattccc
ataaaagtcttgccacccaagaagtgggcacgtctcgcctggcagatcct
tattgtagcatgcagagtccagagatggatggttgacgtcctttcttccc
catcagcatgcatgagatgtgtatacgaaaaagctacttggaaactcatg
atatcacaactcaaatataaaacatagtaataccagatagttaaacatcc
atgataagagagtataaaggagtgtggaggtttaaggtttaggtagggga
ggggtgagcatggttgagaggaaggaagtacaaggagtgggttaagaaac
actaaggattggtggagaaagccttctgaaaacccagtacattttcctta
atgatcattagtatcatcaattttactttattaattttaagctaattatt
agatgttattttactgtggagtt
gaattcagagaaggcagaaatggctggtggatttagatcctgtaggagtt
gtttaaaaatatctggaacagcggtttttatgcgcagtgttggaaagtca
cctggaatttccccagcccgtgccctgtcacttacccaaagcagggtaca
agagtgtcccttgtaaaacttttcccgtgcccttaatggatgccaaagtc
ttgagcttggagtgcgtagacgcgcagagagaacttgttaaaccatgttt
tgaagacgtttttcaggagtggagagagccaaggtgaggggccactgcct
gcttcaaggggctttagcgagatgtgtggacaaagggcctcactctccct
cagtacctttaactgtagggtgacatggactctcccttgctggcttcaaa
gaacaattagtgaaagctcacactttcccaaggctgacatagactgggca
atgtgaggactgtgacatgtgggtgagctgtctctcttcactgtgcaggt
gtgggtgaagcctcacattcagagagactcagtggcttacccaggctcca
cagctctgctaacaaggtctgactttctctcctgaccacatcagggtgct
cacaactgctgctgcttaatctttgatgctctttccatgtttcccaagtc
cttccacctctggctttgctgatgaattcctgcctcctccatagaatcct
agggaaacgcagtagacagggtttctccctccctgtgagaggggcagtga
gctgagtctaagctgtcatctctccatggtgtccctgccaggaaaggtct
tcagcagccctgcccccacatgagagctcttgggtgtgtgacaggcaggc
cagggccttccttccaccctgataaggccaggcagcaagggctggaatgt
aaacctccctgcagctgcagcggagaagcttcatccattgtttcctctgg
gacctgggacgccagtgcagtctactggagctctgaggagagggctttca
aagacagctttagccaaaggtggtgtgagatgctctagtctggaagtgca
ggtgcagagaagtgggtacttgggggaggactggtccctcagggctgggt
agactgcagaacatacatttcctaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_95439361_95439839
seq2: B6Ng01-086D15.b_45_523

seq1  GAATTCCTTTCTGTGGGACAGGCCTCAATCCAATCATAAGAGCAGAGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCTGTGGGACAGGCCTCAATCCAATCATAAGAGCAGAGGTT  50

seq1  ATTCCCATAAAAGTCTTGCCACCCAAGAAGTGGGCACGTCTCGCCTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCATAAAAGTCTTGCCACCCAAGAAGTGGGCACGTCTCGCCTGGCA  100

seq1  GATCCTTATTGTAGCATGCAGAGTCCAGAGATGGATGGTTGACGTCCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTATTGTAGCATGCAGAGTCCAGAGATGGATGGTTGACGTCCTTT  150

seq1  CTTCCCCATCAGCATGCATGAGATGTGTATACGAAAAAGCTACTTGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCATCAGCATGCATGAGATGTGTATACGAAAAAGCTACTTGGAAA  200

seq1  CTCATGATATCACAACTCAAATATAAAACATAGTAATACCAGATAGTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGATATCACAACTCAAATATAAAACATAGTAATACCAGATAGTTAA  250

seq1  ACATCCATGATAAGAGAGTATAAAGGAGTGTGGAGGTTTAAGGTTTAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCATGATAAGAGAGTATAAAGGAGTGTGGAGGTTTAAGGTTTAGGT  300

seq1  AGGGGAGGGGTGAGCATGGTTGAGAGGAAGGAAGTACAAGGAGTGGGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGGGGTGAGCATGGTTGAGAGGAAGGAAGTACAAGGAGTGGGTTA  350

seq1  AGAAACACTAAGGATTGGTGGAGAAAGCCTTCTGAAAACCCAGTACATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACACTAAGGATTGGTGGAGAAAGCCTTCTGAAAACCCAGTACATTT  400

seq1  TCCTTAATGATCATTAGTATCATCAATTTTACTTTATTAATTTTAAGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAATGATCATTAGTATCATCAATTTTACTTTATTAATTTTAAGCTA  450

seq1  ATTATTAGATGTAATTTTACGGAGGAGTT  479
      |||||||||||| ||||||| | ||||||
seq2  ATTATTAGATGTTATTTTACTGTGGAGTT  479

seq1: chr16_95568715_95569851
seq2: B6Ng01-086D15.g_68_1195 (reverse)

seq1  CACCTAGGGAAATGTATG-TCTGCAGGTTCTAACCCAGCCCTTGAGGG-C  48
      |||||| ||||||||||| |||||||  ||| ||||||||| |||||| |
seq2  CACCTA-GGAAATGTATGTTCTGCAG--TCT-ACCCAGCCC-TGAGGGAC  45

seq1  CAGTCCT-CCCCAGGTACCCACTTCTCTGCACCTTGCACTTTCCAGACTT  97
      ||||||| ||||| ||||||||||||||||||| ||||| |||||||| |
seq2  CAGTCCTCCCCCAAGTACCCACTTCTCTGCACC-TGCAC-TTCCAGAC-T  92

seq1  AGAGCATCTCACACCACCCTTTTGGCTAAAGCTGTCTTTTGAAAGCCCTC  147
      ||||||||||||||||||  |||||||||||||||| |||||||||||||
seq2  AGAGCATCTCACACCACC--TTTGGCTAAAGCTGTC-TTTGAAAGCCCTC  139

seq1  TCCTCAGAGCTCCAGTAAGACTGCACTGGCGTCCCAGGTCCCAGAGGAAA  197
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCCTCAGAGCTCCAGT-AGACTGCACTGGCGTCCCAGGTCCCAGAGGAAA  188

seq1  CAATGGATGAAGCTTCTTCCGCTGCAGCTGCAGGGAGGTTTACATTCCAG  247
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAATGGATGAAGCTTC-TCCGCTGCAGCTGCAGGGAGGTTTACATTCCAG  237

seq1  CCCTTGCTGCCTGGCCTTATCAGGGTGGAAGGAAGGCCCTGGCCTGCCTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGCTGCCTGGCCTTATCAGGGTGGAAGGAAGGCCCTGGCCTGCCTG  287

seq1  TCACACACCCAAGAGCTCTCATGTGGGGGCAGGGCTGCTGAAGACC-TTC  346
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCACACACCCAAGAGCTCTCATGTGGGGGCAGGGCTGCTGAAGACCTTTC  337

seq1  CTGGCAGGGACACCATGGAGAGATGACAGCTTAGACTCAGCTCACTGCCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGGGACACCATGGAGAGATGACAGCTTAGACTCAGCTCACTGCCC  387

seq1  CTCTCACAGGGAGGGAGAAACCCTGTCTACTGCGTTTCCCTAGGATTCTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACAGGGAGGGAGAAACCCTGTCTACTGCGTTTCCCTAGGATTCTA  437

seq1  TGGAGGAGGCAGGAATTCATCAGCAAAGCCAGAGGTGGAAGGACTTGGGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAGGCAGGAATTCATCAGCAAAGCCAGAGGTGGAAGGACTTGGGA  487

seq1  AACATGGAAAGAGCATCAAAGATTAAGCAGCAGCAGTTGTGAGCACCCTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGAAAGAGCATCAAAGATTAAGCAGCAGCAGTTGTGAGCACCCTG  537

seq1  ATGTGGTCAGGAGAGAAAGTCAGACCTTGTTAGCAGAGCTGTGGAGCCTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTCAGGAGAGAAAGTCAGACCTTGTTAGCAGAGCTGTGGAGCCTG  587

seq1  GGTAAGCCACTGAGTCTCTCTGAATGTGAGGCTTCACCCACACCTGCACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGCCACTGAGTCTCTCTGAATGTGAGGCTTCACCCACACCTGCACA  637

seq1  GTGAAGAGAGACAGCTCACCCACATGTCACAGTCCTCACATTGCCCAGTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAGAGACAGCTCACCCACATGTCACAGTCCTCACATTGCCCAGTC  687

seq1  TATGTCAGCCTTGGGAAAGTGTGAGCTTTCACTAATTGTTCTTTGAAGCC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCAGCCTTGGGAAAGTGTGAGCTTTCACTAATTGTTCTTTGAAGCC  737

seq1  AGCAAGGGAGAGTCCATGTCACCCTACAGTTAAAGGTACTGAGGGAGAGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGGAGAGTCCATGTCACCCTACAGTTAAAGGTACTGAGGGAGAGT  787

seq1  GAGGCCCTTTGTCCACACATCTCGCTAAAGCCCCTTGAAGCAGGCAGTGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCCTTTGTCCACACATCTCGCTAAAGCCCCTTGAAGCAGGCAGTGG  837

seq1  CCCCTCACCTTGGCTCTCTCCACTCCTGAAAAACGTCTTCAAAACATGGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCACCTTGGCTCTCTCCACTCCTGAAAAACGTCTTCAAAACATGGT  887

seq1  TTAACAAGTTCTCTCTGCGCGTCTACGCACTCCAAGCTCAAGACTTTGGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAGTTCTCTCTGCGCGTCTACGCACTCCAAGCTCAAGACTTTGGC  937

seq1  ATCCATTAAGGGCACGGGAAAAGTTTTACAAGGGACACTCTTGTACCCTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTAAGGGCACGGGAAAAGTTTTACAAGGGACACTCTTGTACCCTG  987

seq1  CTTTGGGTAAGTGACAGGGCACGGGCTGGGGAAATTCCAGGTGACTTTCC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGTAAGTGACAGGGCACGGGCTGGGGAAATTCCAGGTGACTTTCC  1037

seq1  AACACTGCGCATAAAAACCGCTGTTCCAGATATTTTTAAACAACTCCTAC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGCGCATAAAAACCGCTGTTCCAGATATTTTTAAACAACTCCTAC  1087

seq1  AGGATCTAAATCCACCAGCCATTTCTGCCTTCTCTGAATTC  1137
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTAAATCCACCAGCCATTTCTGCCTTCTCTGAATTC  1128