BAC Information

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BAC

Clone NameB6Ng01-087H14
Chromosome16 (Build37)
Map Location 57,414,941 - 57,574,447
singlet/doubletdoublet
Overlap gene2610528E23Rik, 4631422O05Rik
Upstream geneAbi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c
Downstream geneCol8a1, LOC435480, LOC629342, LOC100043477, Dcbld2, St3gal6, LOC100043480
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087H14.bB6Ng01-087H14.g
ACCDH900590DH900591
length1,1771,134
definitionDH900590|Mus musculus domesticus DNA, BAC clone: B6Ng01-087H14, 5' end.DH900591|Mus musculus domesticus DNA, BAC clone: B6Ng01-087H14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,414,941 - 57,415,995)(57,573,295 - 57,574,447)
sequence
gaattcagatacaccattagtacacccctttaatcccaaacaatgaaggt
aaagttagtttgtagaaggaagcacttatatttgaaagtgatgtctagtt
gagtggcagacaaagtgatgaatcagagaaagatttgacagaataggatg
tgcccaactctctcacaagaagagagagaagagggaagctacttgagggc
ttctacagttcagaaaaggagagaaggcagttttactgtgacaattttac
agagacagaatgcagagagaaaacaagctagacacaggtgaagacaaaat
gagacagagaatgagacagattagaacagattgccagaggccgagatgag
aagtcagtcagaggtctggagagaagccagattgaatcagtcagctggaa
gaggagtttaaaccagaagagctgagttgaaccagtcagagccccagagt
ttagaaagaacaaaaaccagttaactgacttagcagttagtctccgaggc
tgaaaacactctaggcctagataagattgcatggaggatagaagcttcca
ggaccaggcctaggttagcagattgaggcagtaagcctctgagatgacaa
ttacatcaggagaataaaagacagttttacaccacacattcacccctcac
tatgtgggtggaccaagatgaagcacagagcatacaaaggtgaactagat
ctgctctccatgtaaggtattcagaacgtttccacagagcttcagtgtca
tctcccagttggttagagttggcccagaacagagatggccaagtggctgt
ctgtgaggaccctaactcagtacaggtcagagtgtttttcagttcccctc
gcttcctctccctgcacaatctcaaacatccaattactataacaatagtg
ccaagcggagaacttacagggcattgcaggtcaacaagttctaagtgagc
aagctccagaactgggaaatgggcagcagctggactgcgagtgaaccaca
gagagggtgtttctgttttcattgacatgttgataatggagcacagtcag
gtacctttacttcactgttcatgaagaggactctgatcgtccaggtttca
gcatacctgagcgaacagagtatagctcataggatccgggacccaccatt
acaatgttcccgcatctaaataaggtg
gaattcttcctggtttccattcatcattttgtgattagttgtttgatacc
attcaaatctcacatgtgccctctggtttaaatgactttaaaaggagccc
tttttttttcattgctgactttgagaggactgcagtgagctgtgtagttc
ctttcagagttctatcctaacttggcttaaaaataattttgaaaacagtt
agaccatcatgtattttgtaatacagttgggtctctgccgattcccaacc
ccaagataaatgtgttttaaacagaagctttctcatttatcatcagcctc
agctttcatccacatttatttaatcatgatgcaagcccacagccttggtg
ttgcagttcatcaccatggaagtgtttctgtcaacaaatccttgctctgt
atcataaaattgattttacaggggagaggaagatacctttgacttttgag
aggtcttcccagtttgcctggatgttgagatgaactgcatttaaaacaat
aactggcaataaaattgactacactaaattttaatagttaagcgtgtgga
acgggaatggaaaagggaaaatggcgaattagctgttctgaagtcatcct
tttagaatgtgacttggggactcgatgtgtaatttaatatgttcctttaa
aagctgtgctctctgccctgaggtgtggagtgagtgtgctcagggctaca
aggagtttggtgtcaatctctaggaagctttggcagagcttttttttttt
catgtaacctgtgaatggcatagcaaccacagaagaaatcacacgattac
ctctgctgccacgcggcatgcttatttttaaaaaagtcttttaacttgtg
ctcctaactatctgcagcttttatttgcttcttgcgagttctttcagaaa
taaaattgtatgcttctgattgtagcctactcacaagcagggcagggcag
cacccacattaagtattttaggaccaaatacacagagcagatgcactttt
gtttgaaggagatgtccagaggttaatgtcatgtggctgattccagattt
agatgtatatatgctgttaggggtttcagtctgcttgggagaacttatca
ggcctgaatttcagctaacttaagtcactcgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_57414941_57415995
seq2: B6Ng01-087H14.b_176_1218

seq1  TTGACAGAATAGGATGTGCCCAACTCTCTCACAAGAAGAGAGAGAAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGAATAGGATGTGCCCAACTCTCTCACAAGAAGAGAGAGAAGAGG  50

seq1  GAAGCTACTTGAGGGCTTCTACAGTTCAGAAAAGGAGAGAAGGCAGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTACTTGAGGGCTTCTACAGTTCAGAAAAGGAGAGAAGGCAGTTTT  100

seq1  ACTGTGACAATTTTACAGAGACAGAATGCAGAGAGAAAACAAGCTAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGACAATTTTACAGAGACAGAATGCAGAGAGAAAACAAGCTAGACA  150

seq1  CAGGTGAAGACAAAATGAGACAGAGAATGAGACAGATTAGAACAGATTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAAGACAAAATGAGACAGAGAATGAGACAGATTAGAACAGATTGC  200

seq1  CAGAGGCCGAGATGAGAAGTCAGTCAGAGGTCTGGAGAGAAGCCAGATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCCGAGATGAGAAGTCAGTCAGAGGTCTGGAGAGAAGCCAGATTG  250

seq1  AATCAGTCAGCTGGAAGAGGAGTTTAAACCAGAAGAGCTGAGTTGAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTCAGCTGGAAGAGGAGTTTAAACCAGAAGAGCTGAGTTGAACCA  300

seq1  GTCAGAGCCCCAGAGTTTAGAAAGAACAAAAACCAGTTAACTGACTTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGCCCCAGAGTTTAGAAAGAACAAAAACCAGTTAACTGACTTAGC  350

seq1  AGTTAGTCTCCGAGGCTGAAAACACTCTAGGCCTAGATAAGATTGCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTCTCCGAGGCTGAAAACACTCTAGGCCTAGATAAGATTGCATGG  400

seq1  AGGATAGAAGCTTCCAGGACCAGGCCTAGGTTAGCAGATTGAGGCAGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGAAGCTTCCAGGACCAGGCCTAGGTTAGCAGATTGAGGCAGTAA  450

seq1  GCCTCTGAGATGACAATTACATCAGGAGAATAAAAGACAGTTTTACACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGAGATGACAATTACATCAGGAGAATAAAAGACAGTTTTACACCA  500

seq1  CACATTCACCCCTCACTATGTGGGTGGACCAAGATGAAGCACAGAGCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCACCCCTCACTATGTGGGTGGACCAAGATGAAGCACAGAGCATA  550

seq1  CAAAGGTGAACTAGATCTGCTCTCCATGTAAGGTATTCAGAACGTTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTGAACTAGATCTGCTCTCCATGTAAGGTATTCAGAACGTTTCCA  600

seq1  CAGAGCTTCAGTGTCATCTCCCAGTTGGTTAGAGTTGGCCCAGAACAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTTCAGTGTCATCTCCCAGTTGGTTAGAGTTGGCCCAGAACAGAG  650

seq1  ATGGCCAAGTGGCTGTCTGTGAGGACCCTAACTCAGTACAGGTCAGAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCAAGTGGCTGTCTGTGAGGACCCTAACTCAGTACAGGTCAGAGTG  700

seq1  TTTTTCAGTTCCCCTCGCTTCCTCTCCCTGCACAATCTCAAACATCCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGTTCCCCTCGCTTCCTCTCCCTGCACAATCTCAAACATCCAAT  750

seq1  TACTATAACAATAGTGCCAAGCGGAGAACTTACAGGGCATTGCAGGTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATAACAATAGTGCCAAGCGGAGAACTTACAGGGCATTGCAGGTCAA  800

seq1  CAAGTTCTAAGTGAGCAAGCTCCAGAACTGGGGAAATGGGCAGCAGCTGG  850
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAAGTTCTAAGTGAGCAAGCTCCAGAACT-GGGAAATGGGCAGCAGCTGG  849

seq1  ACTGCGAGTGAACCACAGAGAGGGTGTTTCTGTTTTCATTGACAATGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACTGCGAGTGAACCACAGAGAGGGTGTTTCTGTTTTCATTGAC-ATGTTG  898

seq1  ATAAATGGAGCACAGTCAGGTACCTTTAACTTCACTGTCAATGAAGAAGG  950
      || |||||||||||||||||||||||| ||||||||||  |||||||  |
seq2  AT-AATGGAGCACAGTCAGGTACCTTT-ACTTCACTGTTCATGAAGA--G  944

seq1  AACTCTGATCGTTCCAGTTTTCAGCATACCTGAAGCAGAACAAGAAGTAT  1000
       |||||||||| ||||| |||||||||||||| ||| |||||   |||||
seq2  GACTCTGATCG-TCCAGGTTTCAGCATACCTG-AGC-GAACA--GAGTAT  989

seq1  AGCTCATAGAAT-CGGGACCCACCATTTACAATTGTTCCCGGCATCTAAA  1049
      ||||||||| || |||||||||||| |||||| ||||||| |||||||||
seq2  AGCTCATAGGATCCGGGACCCACCA-TTACAA-TGTTCCC-GCATCTAAA  1036

seq1  T-AGGTG  1055
      | |||||
seq2  TAAGGTG  1043

seq1: chr16_57573295_57574447
seq2: B6Ng01-087H14.g_67_1200 (reverse)

seq1  AAGCGAGTTTGGAACTTTAAGTTAGCTTGAATATCAAGGGCTGATAGGTT  50
      ||||||||   ||   |||||||||| |||| ||  ||| |||||| |||
seq2  AAGCGAGT---GA--CTTAAGTTAGC-TGAA-ATTCAGGCCTGATAAGTT  43

seq1  -TCTCAAGCAGACTGAAACCCCCCTACAGCATATATTACATCTAAATCTG  99
       || |||||||||||||| ||||  |||||||||| ||||||||||||||
seq2  CTCCCAAGCAGACTGAAA-CCCCTAACAGCATATA-TACATCTAAATCTG  91

seq1  GAATCAGCCACTATGACATAAACTTCTGGACATTCTCCTTCAAAACAAAA  149
      ||||||||||| ||||||| ||| |||||||| |||||||| ||||||||
seq2  GAATCAGCCAC-ATGACATTAACCTCTGGACA-TCTCCTTC-AAACAAAA  138

seq1  GTGCAATTCTTGCTCTGTGTTATTTGGTTCCTAAAATTACTTAATGTGGG  199
      |||||  || ||||||||| ||||||| |||||||| |||||||||||||
seq2  GTGCA--TC-TGCTCTGTG-TATTTGG-TCCTAAAA-TACTTAATGTGGG  182

seq1  TGCTGCCCTGCCCTGCTTGTGAGTAAGGCTACAATCAGAAGCATACAATT  249
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGCTGCCCTGCCCTGCTTGTGAGT-AGGCTACAATCAGAAGCATACAATT  231

seq1  TATATTTCTGAAAGAACTCGCAAGAAGCAAATAAAAGCTGCAGATAGTTA  299
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-TATTTCTGAAAGAACTCGCAAGAAGCAAATAAAAGCTGCAGATAGTTA  280

seq1  GGAGCACAAGTTAAAAGACTTTTTTAAAAATAAGCATGCCGCGTGGCAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCACAAGTTAAAAGACTTTTTTAAAAATAAGCATGCCGCGTGGCAGC  330

seq1  AGAGGTAATCGTGTGATTTCTTCTGTGGTTGCTATGCCATTCACAGGTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAATCGTGTGATTTCTTCTGTGGTTGCTATGCCATTCACAGGTTA  380

seq1  CATGAAAAAAAAAAAGCTCTGCCAAAGCTTCCTAGAGATTGACACCAAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAAAAAAAAAGCTCTGCCAAAGCTTCCTAGAGATTGACACCAAAC  430

seq1  TCCTTGTAGCCCTGAGCACACTCACTCCACACCTCAGGGCAGAGAGCACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTAGCCCTGAGCACACTCACTCCACACCTCAGGGCAGAGAGCACA  480

seq1  GCTTTTAAAGGAACATATTAAATTACACATCGAGTCCCCAAGTCACATTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTAAAGGAACATATTAAATTACACATCGAGTCCCCAAGTCACATTC  530

seq1  TAAAAGGATGACTTCAGAACAGCTAATTCGCCATTTTCCCTTTTCCATTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGATGACTTCAGAACAGCTAATTCGCCATTTTCCCTTTTCCATTC  580

seq1  CCGTTCCACACGCTTAACTATTAAAATTTAGTGTAGTCAATTTTATTGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTCCACACGCTTAACTATTAAAATTTAGTGTAGTCAATTTTATTGCC  630

seq1  AGTTATTGTTTTAAATGCAGTTCATCTCAACATCCAGGCAAACTGGGAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTGTTTTAAATGCAGTTCATCTCAACATCCAGGCAAACTGGGAAG  680

seq1  ACCTCTCAAAAGTCAAAGGTATCTTCCTCTCCCCTGTAAAATCAATTTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCAAAAGTCAAAGGTATCTTCCTCTCCCCTGTAAAATCAATTTTA  730

seq1  TGATACAGAGCAAGGATTTGTTGACAGAAACACTTCCATGGTGATGAACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAGAGCAAGGATTTGTTGACAGAAACACTTCCATGGTGATGAACT  780

seq1  GCAACACCAAGGCTGTGGGCTTGCATCATGATTAAATAAATGTGGATGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACACCAAGGCTGTGGGCTTGCATCATGATTAAATAAATGTGGATGAA  830

seq1  AGCTGAGGCTGATGATAAATGAGAAAGCTTCTGTTTAAAACACATTTATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGGCTGATGATAAATGAGAAAGCTTCTGTTTAAAACACATTTATC  880

seq1  TTGGGGTTGGGAATCGGCAGAGACCCAACTGTATTACAAAATACATGATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTTGGGAATCGGCAGAGACCCAACTGTATTACAAAATACATGATG  930

seq1  GTCTAACTGTTTTCAAAATTATTTTTAAGCCAAGTTAGGATAGAACTCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAACTGTTTTCAAAATTATTTTTAAGCCAAGTTAGGATAGAACTCTG  980

seq1  AAAGGAACTACACAGCTCACTGCAGTCCTCTCAAAGTCAGCAATGAAAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAACTACACAGCTCACTGCAGTCCTCTCAAAGTCAGCAATGAAAAA  1030

seq1  AAAAGGGCTCCTTTTAAAGTCATTTAAACCAGAGGGCACATGTGAGATTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGCTCCTTTTAAAGTCATTTAAACCAGAGGGCACATGTGAGATTT  1080

seq1  GAATGGTATCAAACAACTAATCACAAAATGATGAATGGAAACCAGGAAGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTATCAAACAACTAATCACAAAATGATGAATGGAAACCAGGAAGA  1130

seq1  ATTC  1153
      ||||
seq2  ATTC  1134