BAC Information

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BAC

Clone NameB6Ng01-089I15
Chromosome16 (Build37)
Map Location 58,208,011 - 58,208,604
singlet/doubletsinglet
Overlap geneLOC100043477
Upstream geneTbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480, LOC629342
Downstream geneDcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089I15.bB6Ng01-089I15.g
ACCDH902092DH902093
length1,0091,071
definitionDH902092|Mus musculus domesticus DNA, BAC clone: B6Ng01-089I15, 5' end.DH902093|Mus musculus domesticus DNA, BAC clone: B6Ng01-089I15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgcattatatgggagtgtatgaagggatgaaaggaaagggtg
aaatgtaattatattgtaatctcaaaaacaattttaaaaaaagagtggag
gagaaaccttctttttggtgacaaatgcatccaggagaagtgtcagcata
acagcctctgtgctgctaactgcaagtgttcctccactgtcccagtttct
tttcacttgttatttagaagcagggtctcaccaactagatcaggctggac
ttgaactcattatgtagcgctagaaccttatgtactctaaaccttttgat
tttcctgtcccagagtacctgggatcaggttgtgtaccactgagcctgat
atatgtggtgctggtaccaaacccaaggcctcctgtgtttgaagcagcac
tctggcaactgagctacatttagggtcctgaagcatcattttcagacttt
cactttatcctgggtatctccaagatttcaggtctttgtagcctttgtgt
taaaatatttctcggggactccgcggagggcaggctgcagggactccgcg
gagggcaggctgcacgggtgaccgtgtggaatacagaggccagccgtttc
tggtacaggcgagagtcgcagagcctctgaggcggcgccatcttcagctc
cagacagccggccaccttcttagtgagagcacaggggtctgcccggcctg
agaggtttgtgtcacaggcgccagcgggagccttcttggctccgggactc
cgcggagggcaggctgcacgggtgaccgtgtggaatacagaggccagccg
tttctggtacgggcgagagtcgcagagcttctggggcggcgccatcttcg
gctccagacaaccgaccaccttcctggcgagagccacagagcttctgaag
cggcgcgatcttcggctcagatggccggccaccttcctggtgagagccac
agagcttctgaggcggcgcatcttcggctcagacgaacggcaccttcctg
gccaagcaa
gaattccttataaccccttgagacaagaaatagttgaacatgctcatcgt
accttaaaaaattggcttttttaagacaaaacaggggcagttatatcccc
caaggtcaccaaagggacatcttgcctttactttatttgttctaaatttt
ttgcaaactgatattaaaggtcagtctgcagcggatcgccactggcatcc
agttacctctaattcttatgcattggtataatggaaggacccactaacta
aggaatggaagggtccagatctggggaaggggcttggtctgtgttttttc
acgagatgaagatggagctcggtggctgcctgagagattaattcggcagc
tgaatacagatcctgagtcttcttgtaagtatcactctgaggactaaaat
tcctcttttgctgcatagaattcagttgggaactcaggctcccagaaaag
ctgttttcttgctactctctgagctagctcccccacaagaggccagagac
tgagctttagccttacaatttgcaactgaataaagtacctggacttcccc
aaaagaagatttgcattgctactttctcattgtctagatctcattttctc
aagcaggccaatcaacatcctccagctggagcacagctggcatgcatcct
gaccctgagagtggacaggtggcgactgctcttttcattcaaaagatatt
ccgtcacgttttgtggcgttgggactgatttgagattaggtttactacaa
gggctagaaaagcagatatttcgaatactaaaagagattgttttttattc
tgatagacgggcttagtcccttagctggcctctgggttttccacccttgc
tgttactgcaaggtccccttagttctcaaggccgtgggaataacagaaat
ggaggagggcgaccttccagctccttatatagcctaagagcaccaaaatt
ggggttgtaccagtgacataattctttgtcgaggccttgctaaatctgag
gtgacattctcctttaggagctgcaagtacctcaaacctgggcatactga
agcggtgatcatatcatacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58208011_58208604
seq2: B6Ng01-089I15.b_41_634 (reverse)

seq1  GCTGGCCTCTGTATTCCACACGGTCACCCGTGCAGCCTGCCCTCCGCGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCTCTGTATTCCACACGGTCACCCGTGCAGCCTGCCCTCCGCGGA  50

seq1  GTCCCTGCAGCCTGCCCTCCGCGGAGTCCCCGAGAAATATTTTAACACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGCAGCCTGCCCTCCGCGGAGTCCCCGAGAAATATTTTAACACAA  100

seq1  AGGCTACAAAGACCTGAAATCTTGGAGATACCCAGGATAAAGTGAAAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTACAAAGACCTGAAATCTTGGAGATACCCAGGATAAAGTGAAAGTC  150

seq1  TGAAAATGATGCTTCAGGACCCTAAATGTAGCTCAGTTGCCAGAGTGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGATGCTTCAGGACCCTAAATGTAGCTCAGTTGCCAGAGTGCTG  200

seq1  CTTCAAACACAGGAGGCCTTGGGTTTGGTACCAGCACCACATATATCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAACACAGGAGGCCTTGGGTTTGGTACCAGCACCACATATATCAGG  250

seq1  CTCAGTGGTACACAACCTGATCCCAGGTACTCTGGGACAGGAAAATCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGGTACACAACCTGATCCCAGGTACTCTGGGACAGGAAAATCAAA  300

seq1  AGGTTTAGAGTACATAAGGTTCTAGCGCTACATAATGAGTTCAAGTCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTAGAGTACATAAGGTTCTAGCGCTACATAATGAGTTCAAGTCCAG  350

seq1  CCTGATCTAGTTGGTGAGACCCTGCTTCTAAATAACAAGTGAAAAGAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCTAGTTGGTGAGACCCTGCTTCTAAATAACAAGTGAAAAGAAAC  400

seq1  TGGGACAGTGGAGGAACACTTGCAGTTAGCAGCACAGAGGCTGTTATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAGTGGAGGAACACTTGCAGTTAGCAGCACAGAGGCTGTTATGCT  450

seq1  GACACTTCTCCTGGATGCATTTGTCACCAAAAAGAAGGTTTCTCCTCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTCTCCTGGATGCATTTGTCACCAAAAAGAAGGTTTCTCCTCCAC  500

seq1  TCTTTTTTTAAAATTGTTTTTGAGATTACAATATAATTACATTTCACCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTAAAATTGTTTTTGAGATTACAATATAATTACATTTCACCCT  550

seq1  TTCCTTTCATCCCTTCATACACTCCCATATAATGCAAAGAATTC  594
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCATCCCTTCATACACTCCCATATAATGCAAAGAATTC  594