BAC Information

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BAC

Clone NameB6Ng01-091A06
Chromosome16 (Build37)
Map Location 65,743,015 - 65,744,155
singlet/doubletsinglet
Overlap genenone
Upstream gene4930453N24Rik, Zfp654, LOC433036, Cggbp1, LOC668242, LOC100043815, LOC677448, Htr1f, LOC668247, LOC672931, Pou1f1, Chmp2b
Downstream geneEG383186, Vgll3, LOC664846, LOC100039035, Cadm2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091A06.bB6Ng01-091A06.g
ACCDH903163DH903164
length1,129900
definitionDH903163|Mus musculus domesticus DNA, BAC clone: B6Ng01-091A06, 5' end.DH903164|Mus musculus domesticus DNA, BAC clone: B6Ng01-091A06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tccagaacttctatctgatagaaaaacatggactgacaggtaagaacatt
ttccttgtttccagaaaatgctcgcattggaagacaccaatgaagtatag
ctaaggcacatcttttaatttattttattttgagaaggatatcccacagc
tagtattggccatctgaagtttggattttgacaagaaaacaagttgctaa
ctattaagatcagccagataagactctcagttcttggtctacttctagga
ggtaacaaaacccaattctaaacatgtaaattatttattttagcagaaaa
gatggcctggggggttcctggcttttgtttaacttcctcaccctacttgc
ccaattccagatgtgcatgcaggaaagattgtgagcatggaaagttactg
catgtgtgaccacattcttgctaaatgccactgagtgagctgttggctga
aggaaggactggtactggaatgtgggagagagtgttagagaggaaataca
gaatgctggtggaaagaatgctactttgagtacaaagaaatctctgactg
actctgaacttagggcctggagggtgggaaagcaggagacagtcatgaag
ctttgttttacatatgtatattatgtatatgtatacatggcgtgaaatat
tatttatatattatataatcaattatataattaaataatagattatatta
tttatgttatatatgtaacaaaattttctgccatctatatgcacacacac
acacacacacacacacacacacacacacaggcactgaaaactacaactag
tacttaagacaaagttttcatgtcctgggatggacatgaaaactgaattt
tggggctggagagatggcttagttgttaagagcactgactgctcttccaa
agatactgagttcaattcccagcatgacatggtgggctcacaaccatcta
aaatatgatcaattccctcttatggtgtgtctgagacagctacatgtact
catataaataaatcttaagaaaaaaaaattgatttacaaatctaaactat
ttgacttaaatgctcgaaggaattcatctaccatcaactgaggctttact
ttcttgattactatgcaggtggcctcttt

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacgatatgtactcactgataagtggatactagcccagaacc
taggaatcccccgaaattagattccattttctaaacaccttgaacttcag
aaagatgaagacagaagtgtggacaccatgcccctctttagaagtgggaa
caaaacacccctgggaggagttacagaaacaaagtttgggagctcagatg
aaaagatggaccatgctgagaccgccctatccagagatcactccataaat
cagcattcaactctggcaccctttggtatactaggaagatttatgctaaa
gaaccagatgtagcttgttcttgtgagaatatgccggggctagcaaacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_65743015_65744155
seq2: B6Ng01-091A06.b_55_1183

seq1  TCCAGAACTTCTATCTGATAGAAAAACATGGACTGACAGGTAAGAACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAACTTCTATCTGATAGAAAAACATGGACTGACAGGTAAGAACATT  50

seq1  TTCCTTGTTTCCAGAAAATGCTCGCATTGGAAGACACCAATGAAGTATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGTTTCCAGAAAATGCTCGCATTGGAAGACACCAATGAAGTATAG  100

seq1  CTAAGGCACATCTTTTAATTTATTTTATTTTGAGAAGGATATCCCACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGCACATCTTTTAATTTATTTTATTTTGAGAAGGATATCCCACAGC  150

seq1  TAGTATTGGCCATCTGAAGTTTGGATTTTGACAAGAAAACAAGTTGCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTGGCCATCTGAAGTTTGGATTTTGACAAGAAAACAAGTTGCTAA  200

seq1  CTATTAAGATCAGCCAGATAAGACTCTCAGTTCTTGGTCTACTTCTAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAGATCAGCCAGATAAGACTCTCAGTTCTTGGTCTACTTCTAGGA  250

seq1  GGTAACAAAACCCAATTCTAAACATGTAAATTATTTATTTTAGCAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACAAAACCCAATTCTAAACATGTAAATTATTTATTTTAGCAGAAAA  300

seq1  GATGGCCTGGGGGGTTCCTGGCTTTTGTTTAACTTCCTCACCCTACTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCTGGGGGGTTCCTGGCTTTTGTTTAACTTCCTCACCCTACTTGC  350

seq1  CCAATTCCAGATGTGCATGCAGGAAAGATTGTGAGCATGGAAAGTTACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTCCAGATGTGCATGCAGGAAAGATTGTGAGCATGGAAAGTTACTG  400

seq1  CATGTGTGACCACATTCTTGCTAAATGCCACTGAGTGAGCTGTTGGCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGACCACATTCTTGCTAAATGCCACTGAGTGAGCTGTTGGCTGA  450

seq1  AGGAAGGACTGGTACTGGAATGTGGGAGAGAGTGTTAGAGAGGAAATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGACTGGTACTGGAATGTGGGAGAGAGTGTTAGAGAGGAAATACA  500

seq1  GAATGCTGGTGGAAAGAATGCTACTTTGAGTACAAAGAAATCTCTGACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTGGTGGAAAGAATGCTACTTTGAGTACAAAGAAATCTCTGACTG  550

seq1  ACTCTGAACTTAGGGCCTGGAGGGTGGGAAAGCAGGAGACAGTCATGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAACTTAGGGCCTGGAGGGTGGGAAAGCAGGAGACAGTCATGAAG  600

seq1  CTTTGTTTTACATATGTATATTATGTATATGTATACATGGCGTGAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTTACATATGTATATTATGTATATGTATACATGGCGTGAAATAT  650

seq1  TATTTATATATTATATAATCAATTATATAATTAAATAATAGATTATATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATATATTATATAATCAATTATATAATTAAATAATAGATTATATTA  700

seq1  TTTATGTTATATATGTAACAAAA-TTTCTGCCATCTATATGCACACACAC  749
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTTATGTTATATATGTAACAAAATTTTCTGCCATCTATATGCACACACAC  750

seq1  ACACACACACACACACACACACACACACAGGCACTGAAAACTACAACTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACAGGCACTGAAAACTACAACTAG  800

seq1  TACTTAAGACAAAGTTTTCATGTCCTGGGATGGACATGAAAACTGAATTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAGACAAAGTTTTCATGTCCTGGGATGGACATGAAAACTGAATTT  850

seq1  TGGGGCTGGAGAGATGGCTTAGTTGTTAAGAGCACTGACTGCTCTTCCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCTGGAGAGATGGCTTAGTTGTTAAGAGCACTGACTGCTCTTCCAA  900

seq1  AGATACTGAGTTCAATTCCCAGCAATGACATGGT-GGCTCACAACCATCT  948
      ||||||||||||||||||||||| |||||||||| |||||||||||||||
seq2  AGATACTGAGTTCAATTCCCAGC-ATGACATGGTGGGCTCACAACCATCT  949

seq1  AAAATATGATCCAATTCCCTCTTATGGTGTGTCTGAAGACAGCTACAATG  998
      |||||||||| |||||||||||||||||||||||| |||||||||| |||
seq2  AAAATATGAT-CAATTCCCTCTTATGGTGTGTCTG-AGACAGCTAC-ATG  996

seq1  TACTCATATAAATAAATCTTTAAAGAAAAAAAAATTGATTTTAACAAATC  1048
      ||||||||||||||||||||  |||||||||||||||||||  |||||||
seq2  TACTCATATAAATAAATCTT--AAGAAAAAAAAATTGATTT--ACAAATC  1042

seq1  TAAAACTATTTGACTTAAATGCTCGAAGGAATTTCATC-ACCATCAACTG  1097
      | ||||||||||||||||||||||||||||| |||||| |||||||||||
seq2  T-AAACTATTTGACTTAAATGCTCGAAGGAA-TTCATCTACCATCAACTG  1090

seq1  TATAGCTCTACTTTCTATGATTACATATGCAAGTTGACCTCTTT  1141
          ||| |||||||| ||||||| ||||| || || |||||||
seq2  --AGGCTTTACTTTCT-TGATTAC-TATGC-AGGTGGCCTCTTT  1129


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