BAC Information

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BAC

Clone NameB6Ng01-092B19
Chromosome16 (Build37)
Map Location 30,834,761 - 30,835,282
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1968, LOC100043102, 9030404E10Rik, Hes1, EG547263, 1700025H01Rik, LOC100043110, Cpn2, Lrrc15, Gp5, Atp13a3, Tmem44, Lsg1, BC022623, LOC100043122
Downstream geneAI480653, Centb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092B19.bB6Ng01-092B19.g
ACCDH903962DH903963
length674750
definitionDH903962|Mus musculus domesticus DNA, BAC clone: B6Ng01-092B19, 5' end.DH903963|Mus musculus domesticus DNA, BAC clone: B6Ng01-092B19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagttttgggtatggtgttttgggatgtctcttagatcttcaagt
ggagatgtccgatgggcagccggatgtgtgtgcctggaattggcaataaa
aatgaagcagaagcaggtatctaggagtctatagcttgtgggtagaatct
agaagtttgacactgaaggtcaccaaggtaagcctagatagagaacagat
ccacagagatgagaagcggcctgcaaatacaataaagagcagggttcaag
gcaggggaaatccaaccaagagccccttctatcaaaagtcattggccagg
tcaaattctgcctttcagtgagagatgtgaccattggggctaccaaggca
ggggtcactgcatgggtgcaaactcacccccagaacactcaataaagatc
aaaagaacagaagctgtcagaactaccaatgttttgaggagtcttgtcat
aaagagagacgtgaagtggttggtagatcggggaaagagatgaagaacat
ttctctaaagaccagagaaacaattgcatgggtctgtgttattggagaaa
cacttgaatgtgtttgtgcctttgggagggaaaagctgatccaggagtta
ggaggagcatgactagagctgtgatcttgagtagagtgtgagagtgaagg
gatggaacagagggatggaggagg
gaattccaacacagttaacaatttgcttaaactgcccaggcaaaaccaaa
agttctcaactcaagggagtaagagagctgattcgggagcaaaagtgtgc
tggctgtgacttagaaacacggagctggccttacctcaggttccgtggtc
cagtgtggaaacagttccatggagtttttatggtaacagtacaaaggaaa
ttataaatcaaggcgattttaaagtaagcagagcacagtggagaaatctc
agctacaggcattggatgttatctgatagcattcttagctggtgtatggt
ggagaatagagttccgtccaagttcctacatttcaaaggttttgttgtta
ggctaccatgcctaacaggatgttaggtctggcacaactgggctaacgga
atggctatttactaggctgattatcacataaattgtaattaggcttgaaa
ctgcaagagcccaacctctccacctctttgaagttttaattagctaaaca
gccaacatagcctgcttctttccaggaattctcattcacaaggccttaaa
ctttcagaaacgggctatggaccaacaatttttccaggaatctcatgaga
aaccctacttacagtaagagatccatcctaaatttccatgcaatccaagt
ggatccctgttttagatggtcagatggtcagattataatcccacccaaag
cagggctagagccaccctataatctcatttagcaacatgagaaggaaaag

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_30834761_30835282
seq2: B6Ng01-092B19.g_69_590 (reverse)

seq1  GAAAGAAGCAGGCTATGTTGGCTGTTTAGCTAATTAAAACTTCAAAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGCAGGCTATGTTGGCTGTTTAGCTAATTAAAACTTCAAAGAGG  50

seq1  TGGAGAGGTTGGGCTCTTGCAGTTTCAAGCCTAATTACAATTTATGTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGGTTGGGCTCTTGCAGTTTCAAGCCTAATTACAATTTATGTGAT  100

seq1  AATCAGCCTAGTAAATAGCCATTCCGTTAGCCCAGTTGTGCCAGACCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGCCTAGTAAATAGCCATTCCGTTAGCCCAGTTGTGCCAGACCTAA  150

seq1  CATCCTGTTAGGCATGGTAGCCTAACAACAAAACCTTTGAAATGTAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGTTAGGCATGGTAGCCTAACAACAAAACCTTTGAAATGTAGGAA  200

seq1  CTTGGACGGAACTCTATTCTCCACCATACACCAGCTAAGAATGCTATCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGACGGAACTCTATTCTCCACCATACACCAGCTAAGAATGCTATCAG  250

seq1  ATAACATCCAATGCCTGTAGCTGAGATTTCTCCACTGTGCTCTGCTTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATCCAATGCCTGTAGCTGAGATTTCTCCACTGTGCTCTGCTTACT  300

seq1  TTAAAATCGCCTTGATTTATAATTTCCTTTGTACTGTTACCATAAAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATCGCCTTGATTTATAATTTCCTTTGTACTGTTACCATAAAAACT  350

seq1  CCATGGAACTGTTTCCACACTGGACCACGGAACCTGAGGTAAGGCCAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAACTGTTTCCACACTGGACCACGGAACCTGAGGTAAGGCCAGCT  400

seq1  CCGTGTTTCTAAGTCACAGCCAGCACACTTTTGCTCCCGAATCAGCTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGTTTCTAAGTCACAGCCAGCACACTTTTGCTCCCGAATCAGCTCTC  450

seq1  TTACTCCCTTGAGTTGAGAACTTTTGGTTTTGCCTGGGCAGTTTAAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCCCTTGAGTTGAGAACTTTTGGTTTTGCCTGGGCAGTTTAAGCAA  500

seq1  ATTGTTAACTGTGTTGGAATTC  522
      ||||||||||||||||||||||
seq2  ATTGTTAACTGTGTTGGAATTC  522