BAC Information

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BAC

Clone NameB6Ng01-092B20
Chromosome16 (Build37)
Map Location 32,541,026 - 32,726,618
singlet/doubletdoublet
Overlap geneLOC385820, Tfrc, Tnk2, ENSMUSG00000075265
Upstream geneGm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19
Downstream geneLOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148, Slc12a8, 4632417D23Rik, Heg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092B20.bB6Ng01-092B20.g
ACCDH903964DH903965
length1,092157
definitionDH903964|Mus musculus domesticus DNA, BAC clone: B6Ng01-092B20, 5' end.DH903965|Mus musculus domesticus DNA, BAC clone: B6Ng01-092B20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,541,026 - 32,542,093)(32,726,456 - 32,726,618)
sequence
gaattcactctgtagaccaggctggcctcgaactcagaaatttgtctgcc
tctgcctcccaagtgctgggattaaaggtgtgcgccaccaccgcccagcc
cagcctgatttcttatactacctagggccacctgcctggggatgacattg
cctacagtgggccgggcaatcccgtatccttcatcaatcaaggtaattct
cccataggcttctctacagacaatatgatgagggtaattcttcaagcaag
gctgcttcttcccaggtctctctagtttatgtcaagttacaagacaaaac
aaaactaatgggtgcaagcctttctttctggctctcaggaggcagaggta
ggtggatctctgagtttgaggccagcttcttcttagagagagttccagga
cagccagggctccatggagaaaccctgtctcaaaaagtcaaagccaaaca
acaacaacaacaacaacaacaacaacaacaagcaaagcaaacaaacaaca
aaaaccgaacaacaacaacaaaacctacaaaaactacccagcacagggac
tcaaggaagccagaagctgtgtgtggctggaggcagagataaggttgtga
accagagatggccagcagcctacagctagaagacaaaagggaggatgtct
atgtagaacatcctgctaaccgctctgcgaactccttgacttaggacttc
tagcttccaacactatgagagaatggattcttgttgtctgaggccacacg
ctttgtggggaagcattttggtgactcaggaaagctaatttggctgagtt
gcttcataggtgcttggggcaatcaaagccagaagcagtaattactgtca
acatgtcatgtgcaccgggtaatggggccagaggatttttatctttggcc
ctatttaatttactatcttcgtggataatattaaagcctgccagtcaaat
gagtgattatgcacacccagagaggttaatgatgaaagtagaatctattc
caaaacacccttgaactgcaaaagtgaactgactttgaaagtttgcattc
tgaacagagctaggtcctttcacttagtgcacgagaagactt
tagaccaccctggtgtgtgtagtgagttccagaccagccagagttacatg
aaaagaatctttctcataaagataaaaatgatttttgttgccattagaga
cagagaacatgaagttgggttagtggggttagggatctaggaagtattgg
aagaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32541026_32542093
seq2: B6Ng01-092B20.b_69_1138

seq1  TGGCCTCGAACTCAGAAATTTGTCTGCCTCTGCCTCCCAAGTGCTGGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCGAACTCAGAAATTTGTCTGCCTCTGCCTCCCAAGTGCTGGGAT  50

seq1  TAAAGGTGTGCGCCACCACCGCCCAGCCCAGCCTGATTTCTTATACTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGTGCGCCACCACCGCCCAGCCCAGCCTGATTTCTTATACTACC  100

seq1  TAGGGCCACCTGCCTGGGGATGACATTGCCTACAGTGGGCCGGGCAATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCCACCTGCCTGGGGATGACATTGCCTACAGTGGGCCGGGCAATCC  150

seq1  CGTATCCTTCATCAATCAAGGTAATTCTCCCATAGGCTTCTCTACAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATCCTTCATCAATCAAGGTAATTCTCCCATAGGCTTCTCTACAGACA  200

seq1  ATATGATGAGGGTAATTCTTCAAGCAAGGCTGCTTCTTCCCAGGTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGAGGGTAATTCTTCAAGCAAGGCTGCTTCTTCCCAGGTCTCTC  250

seq1  TAGTTTATGTCAAGTTACAAGACAAAACAAAACTAATGGGTGCAAGCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTATGTCAAGTTACAAGACAAAACAAAACTAATGGGTGCAAGCCTT  300

seq1  TCTTTCTGGCTCTCAGGAGGCAGAGGTAGGTGGATCTCTGAGTTTGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGGCTCTCAGGAGGCAGAGGTAGGTGGATCTCTGAGTTTGAGGC  350

seq1  CAGCTTCTTCTTAGAGAGAGTTCCAGGACAGCCAGGGCTCCATGGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCTTCTTAGAGAGAGTTCCAGGACAGCCAGGGCTCCATGGAGAAA  400

seq1  CCCTGTCTCAAAAAGTCAAAGCCAAACAACAACAACAACAACAACAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTCAAAAAGTCAAAGCCAAACAACAACAACAACAACAACAACAA  450

seq1  CAACAACAAGCAAAGCAAACAAACAACAAAAACCGAACAACAACAACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAAGCAAAGCAAACAAACAACAAAAACCGAACAACAACAACAAA  500

seq1  ACCTACAAAAACTACCCAGCACAGGGACTCAAGGAAGCCAGAAGCTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACAAAAACTACCCAGCACAGGGACTCAAGGAAGCCAGAAGCTGTGT  550

seq1  GTGGCTGGAGGCAGAGATAAGGTTGTGAACCAGAGATGGCCAGCAGCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGGAGGCAGAGATAAGGTTGTGAACCAGAGATGGCCAGCAGCCTA  600

seq1  CAGCTAGAAGACAAAAGGGAGGATGTCTATGTAGAACATCCTGCTAACCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGAAGACAAAAGGGAGGATGTCTATGTAGAACATCCTGCTAACCG  650

seq1  CTCTGCGAACTCCTTGACTTAGGACTTCTAGCTTCCAACACTATGAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCGAACTCCTTGACTTAGGACTTCTAGCTTCCAACACTATGAGAGA  700

seq1  ATGGATTCTTGTTGTCTGAGGCCACACGCTTTGTGGGGAAGCA-TTTGGT  749
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATGGATTCTTGTTGTCTGAGGCCACACGCTTTGTGGGGAAGCATTTTGGT  750

seq1  GACTCAGGAAAGCTAATTTGGCTGAGTTGCTTCATAGGTGCTT-GGGCAA  798
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GACTCAGGAAAGCTAATTTGGCTGAGTTGCTTCATAGGTGCTTGGGGCAA  800

seq1  TCAAAGCCAGAAGCAGTAATTACTGTCAACATGTCATGTGCACC-GGTAA  847
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCAAAGCCAGAAGCAGTAATTACTGTCAACATGTCATGTGCACCGGGTAA  850

seq1  T-GGGCCAGAGGATTTTTATCTTTGGCCCTAATGTATTTTACTATCCTCT  896
      | |||||||||||||||||||||||||||| || || ||||||||| || 
seq2  TGGGGCCAGAGGATTTTTATCTTTGGCCCT-ATTTAATTTACTATCTTCG  899

seq1  TGGATAATATTAAAGCCTGCCAGTCAAATGAGTGGATTATGCACAACCCA  946
      ||||||||||||||||||||||||||||||||| |||||||||| |||||
seq2  TGGATAATATTAAAGCCTGCCAGTCAAATGAGT-GATTATGCAC-ACCCA  947

seq1  GAGAGGTTAATGATGAAGGTAGAATCTATGCAAAAACA-CCTTGAACTGC  995
      ||||||||||||||||| ||||||||||| | |||||| |||||||||||
seq2  GAGAGGTTAATGATGAAAGTAGAATCTATTCCAAAACACCCTTGAACTGC  997

seq1  AAAAGTGGACTGAACTTTGAAAG-TTGCA-TCTGAACAAGAGCAAAGTCC  1043
      ||||||| |||| |||||||||| ||||| ||||||| ||||| | ||||
seq2  AAAAGTGAACTG-ACTTTGAAAGTTTGCATTCTGAAC-AGAGCTAGGTCC  1045

seq1  -TTCACTTAGTGCAGGGGGAAGACTT  1068
       |||||||||||||  | ||||||||
seq2  TTTCACTTAGTGCA-CGAGAAGACTT  1070

seq1: chr16_32726456_32726618
seq2: B6Ng01-092B20.g_70_232 (reverse)

seq1  CCCTCTTCCAATACTTCCTAGATCCCTAACCCCACTAACCCAACTTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTCCAATACTTCCTAGATCCCTAACCCCACTAACCCAACTTCATG  50

seq1  TTCTCTGTCTCTAATGGCAACAAAAATCATTTTTATCTTTATGAGAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTCTCTAATGGCAACAAAAATCATTTTTATCTTTATGAGAAAGA  100

seq1  TTCTTTTCATGTAACTCTGGCTGGTCTGGAACTCACTACACACACCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCATGTAACTCTGGCTGGTCTGGAACTCACTACACACACCAGGG  150

seq1  TGGTCTAGAATTC  163
      |||||||||||||
seq2  TGGTCTAGAATTC  163