BAC Information

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BAC

Clone NameB6Ng01-092G22
Chromosome16 (Build37)
Map Location 44,697,954 - 44,698,991
singlet/doubletsinglet
Overlap genenone
Upstream geneDrd3, Qtrtd1, 2610015P09Rik, Zdhhc23, Gramd1c, Atp6v1a, Nat13, Gm608, Sidt1, Ccdc52, Wdr52, Boc, LOC100043731
Downstream geneBC027231, Gtpbp8, Cd200r1, LOC271374, F630003A18Rik, Cd200r4, LOC546665, Cd200r2, Cd200r3, EG433021, Ccdc80, Slc35a5, Atg3, EG547267, Btla, Cd200, LOC385905, Gm609, LOC628681, Slc9a10, Gcet2, BC016579, Tmprss7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092G22.bB6Ng01-092G22.g
ACCDH904196DH904197
length1,0321,242
definitionDH904196|Mus musculus domesticus DNA, BAC clone: B6Ng01-092G22, 5' end.DH904197|Mus musculus domesticus DNA, BAC clone: B6Ng01-092G22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatcatcccctctcctttcctattagcttaattttaattttgct
tccagaataaatatttcacaggtttccttgttcgtgtggaactggaggaa
atataataacgttggctcaggtggatgaatgtggctttacctgccaggtc
tggtgtgtggacttcagtgttggatttatgattcttacctagccatgtgg
taaagactaaataaagacagtcatggggttgttaagtaagggtccaagag
cagattattgaccaagggtggattgagaccaaactgaatctgctgggtct
gctaatccctggaacgcagttctttttcccaattggaaaaagtacaagaa
taccattagatttggaggacgccttcaataaagtggtaaagtagttgtgt
tcttcatagactaggagcctaataaagctggctgtatattaggctgggga
gcaggaactcacatacacgcttcaaagggacacgcgggactgttgaaaag
gcacagccagggccagcctgatgcaaaattatgcattgtctctgtggagt
gaaggtttgtgtcctccttaagtttgtatgctgagattgtaagccctgac
tcaatggtatatgaagtgaagcctttggaaagcaatgaggttgtaagtgt
gcgttcctatgaacagaccaatacacttaggagaaaaggctctagaacac
tttcctccccagtcacctccctctccctcttcttcctctctggtctctgt
cacgtgaggaagcaacatgaggacaatctcccgcatgctttggtagcaag
acacagggaactcgagctagaagcttcttcctgtttctcctggctctcat
agtgctggaagatgccacgcaggctgccgagagagaaatatctacctaag
ctgtggtccctgtgtgcaacaaaccacctggccagggaaagggtgctcac
tggaacaactagtgcagactattttggggggaccaactgcttctgatgga
ttgccacctgatctacactaaggaacttgcta
gaattctcgtttgtaggtctagatccattccccagctttcccagtccttc
tctgtgactctgaaggggattcattaggagcactggcagaaaactcacag
taaatgtaggtaggtcaacaggtaggaagaaagtcaggtcacaatattgc
tcctgttgcgatgccacattgaatgtcactactgtgaccaattcagctgg
gcactggagcagggatgtggagatcagataaaagaagatctcccggattc
ctggtcagtcagttccattgaaatatcaaactcgagaagctaacagcttc
tggaaaaggtgagagccacagagcttctgaggcagcgccattttcgggct
ccagacatctggccaccatcccgggaggccagaggacaggtgtctgcccg
gcccagtaggcttttgcctcaggatcaacagaagccatcttagttcctgg
acttgacagacagtagtctgcacaggtgagagtgtggactacagaagcta
acagcttctgtgacaggccaaagcaacacagcttctgggaaaggtcctgt
tttgggccttcatctttggccaggaggaggtctaaacgccacataactgt
gcaccttccctgtaagaggagagcttacctgcagagactgttctgacaat
gaaacctcagaggagagatctagtctcccaggtctgcagatagagggtaa
cagaatcaccagaggaacaatctctaaacagagacaactataacaactaa
ctccagagattaccagatggcaaaaggtaaacgtaagaatcttactaaca
gaaagatccaacaaagatagagaacttcagaccattttctcttatgaata
tagatgcaaaatcctcaataaaattctcactaaccgaatccaagaacaca
ttaaagcaatcatccatcctgaccaagtaggttttaatccagggatgcag
ggatggtttatatacggaaatacatcaacgtaatccagtatataaactaa
cctcaagacaaaaccacatgatcatcctcgttagatgcagaaaagcattc
gacaagatccacacccattcatggataaaggctctggaatagatcaggaa
atccaggccatactttaccctgataaagcaatctcacgccaatacccatg
ccatcaactaaagtattggggaaccttgaaccatcctccttaaaatccgg
gactagacagggttggtggccgtctctcacacttacagatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_44697954_44698991
seq2: B6Ng01-092G22.b_45_1075

seq1  GAATTCAATCATCCCCTCTCCTTTCCTATTAGCTTAATTTTAATTTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCATCCCCTCTCCTTTCCTATTAGCTTAATTTTAATTTTGCT  50

seq1  TCCAGAATAAATATTTCACAGGTTTCCTTGTTCGTGTGGAACTGGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAATAAATATTTCACAGGTTTCCTTGTTCGTGTGGAACTGGAGGAA  100

seq1  ATATAATAACGTTGGCTCAGGTGGATGAATGTGGCTTTACCTGCCAGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATAACGTTGGCTCAGGTGGATGAATGTGGCTTTACCTGCCAGGTC  150

seq1  TGGTGTGTGGACTTCAGTGTTGGATTTATGATTCTTACCTAGCCATGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGTGGACTTCAGTGTTGGATTTATGATTCTTACCTAGCCATGTGG  200

seq1  TAAAGACTAAATAAAGACAGTCATGGGGTTGTTAAGTAAGGGTCCAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACTAAATAAAGACAGTCATGGGGTTGTTAAGTAAGGGTCCAAGAG  250

seq1  CAGATTATTGACCAAGGGTGGATTGAGACCAAACTGAATCTGCTGGGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTATTGACCAAGGGTGGATTGAGACCAAACTGAATCTGCTGGGTCT  300

seq1  GCTAATCCCTGGAACGCAGTTCTTTTTCCCAATTGGAAAAAGTACAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATCCCTGGAACGCAGTTCTTTTTCCCAATTGGAAAAAGTACAAGAA  350

seq1  TACCATTAGATTTGGAGGACGCCTTCAATAAAGTGGTAAAGTAGTTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTAGATTTGGAGGACGCCTTCAATAAAGTGGTAAAGTAGTTGTGT  400

seq1  TCTTCATAGACTAGGAGCCTAATAAAGCTGGCTGTATATTAGGCTGGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATAGACTAGGAGCCTAATAAAGCTGGCTGTATATTAGGCTGGGGA  450

seq1  GCAGGAACTCACATACACGCTTCAAAGGGACACGCGGGACTGTTGAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAACTCACATACACGCTTCAAAGGGACACGCGGGACTGTTGAAAAG  500

seq1  GCACAGCCAGGGCCAGCCTGATGCAAAATTATGCATTGTCTCTGTGGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCCAGGGCCAGCCTGATGCAAAATTATGCATTGTCTCTGTGGAGT  550

seq1  GAAGGTTTGTGTCCTCCTTAAGTTTGTATGCTGAGATTGTAAGCCCTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTTGTGTCCTCCTTAAGTTTGTATGCTGAGATTGTAAGCCCTGAC  600

seq1  TCAATGGTATATGAAGTGAAGCCTTTGGAAAGCAATGAGGTTGTAAGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGTATATGAAGTGAAGCCTTTGGAAAGCAATGAGGTTGTAAGTGT  650

seq1  GCGTTCCTATGAACAGACCAATACACTTAGGAGAAAAGGCTCTAGAACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTCCTATGAACAGACCAATACACTTAGGAGAAAAGGCTCTAGAACAC  700

seq1  TTTCCTCCCCAGTCACCTCCCTCTCCCTCTTCTTCCTCTCTGGTCTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCCCAGTCACCTCCCTCTCCCTCTTCTTCCTCTCTGGTCTCTGT  750

seq1  CACGTGAGGAAGCAACATGAGGACAATCTCCCGCATGCTTTGGTAGCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGAGGAAGCAACATGAGGACAATCTCCCGCATGCTTTGGTAGCAAG  800

seq1  ACACAGGGAACTCGAGCTAGAAGCTTCTTCCTGTTTCTCCTGGCTCTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGGAACTCGAGCTAGAAGCTTCTTCCTGTTTCTCCTGGCTCTCAT  850

seq1  AGTGCTGGAAGATGCCACGCAGGCTGCCGAGAGAGAAATATCTACCTAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGGAAGATGCCACGCAGGCTGCCGAGAGAGAAATATCTACCTAAG  900

seq1  CTGTGGTCCCTGTGTGCAACAAAACCACCTGGCCAGGGAAGGGGTGCTCA  950
      |||||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  CTGTGGTCCCTGTGTGCAAC-AAACCACCTGGCCAGGGAAAGGGTGCTCA  949

seq1  CTGGAACAACTAGTGGCAAGACTATTTTGGGGGGAACCAACTGCTTTCTG  1000
      |||||||||||||||   |||||||||||||||| ||||||||| |||||
seq2  CTGGAACAACTAGTG--CAGACTATTTTGGGGGG-ACCAACTGC-TTCTG  995

seq1  ATTGGATTTGCCACCTGATCTACACTAAGGAACCTGCT  1038
      | |||| |||||||||||||||||||||||||| ||||
seq2  A-TGGA-TTGCCACCTGATCTACACTAAGGAACTTGCT  1031