BAC Information

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BAC

Clone NameB6Ng01-093E06
Chromosome16 (Build37)
Map Location 63,923,670 - 63,924,756
singlet/doubletsinglet
Overlap genenone
Upstream genePros1, Epha3
Downstream geneLOC100043540, Ckt2, 4930453N24Rik, Zfp654, LOC433036, Cggbp1, LOC668242, LOC100043815, LOC677448, Htr1f
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093E06.bB6Ng01-093E06.g
ACCDH904800DH904801
length1,2651,077
definitionDH904800|Mus musculus domesticus DNA, BAC clone: B6Ng01-093E06, 5' end.DH904801|Mus musculus domesticus DNA, BAC clone: B6Ng01-093E06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagttcttcacaaactattccacaaaatagaagcagaaggtact
ttactcaattcgttctataaagccacaattaccctgatacctaaaccaca
taaagacccaacaaagtaagagaacttcagacaaatttcccttattaata
tcaatgaaaaatactttatataattctctcaaaccgaatccaagaacaca
tcaaaatgatcatccttcatgatcaaataggcttcatcccagggatacaa
ggatggttcaatatatggaaatccatcaaacgtaatccactatataaaca
aactcaaagaaaacaacacatgatcatctcattagatgctgagaaaacat
ttgacaaatccaacaccccttcatgataagagtcttggaaagatcagcaa
ttcaaggcccatacctaaacatgataaaagcaatctacagcaaaccagta
gccaacatcaaagtaaatgaagagaaactgaaaagaatcccacgaaaatc
agggactagactaggctgtccactcttccctacctattcaatatagtact
tgaagtcttagtcagagtaattagataacaaaaggagatcaaagaaatac
caattggaaaggaagaggtaaaaaatatcactatttgtagatgatatgat
agtatatataagtgaccctaaaaattccaccagagaactcctaagcctca
taaacaacttcagtgaagtagatggacataaaattaactcaaacaaatca
gtagcatttctctacataaaggataaacaggctgagaaagaaatcacgta
aacaacacccttcataataatcacaaataatataaaataccttggtgtga
ctctaactaaggaagtgaaagatctgtatgataagaacttcaaatctctg
aaaaagaatggaagagatctcagaagatggaaagatctcccatgctcatg
gattggcaagattaatatagtaaaatggctgtcttgccaaagcaatctac
acattcatgcatctatatcaaattctacttacttatcccatagttagaag
ggcatttgcaaattcatctggaatacaaaaaaacctaaatagcaaaacta
ttctcataataaaggacctctggggttataccatgcctggagccaagctg
tctacggagcgatgtgaaggacttattgtactgtagtgacttgtcaggaa
tgagtgaccaattaatcgaatgacccaccatgtcagtgagtttggaagga
cgtaacccacctgtt
gaattccatcattctgtctgcacctctttttctagtccttgctttatttt
attttctatagttgacattggtaccttcggcttcatgaaaatattgcaac
aatgtggctcatgataggtgtgaatgaggccaagactcaaagatgcattc
tgcattagaatggatggaaataacgactctgatttattttagattgtttg
tctttgatttctttattcataggaaaataaagaaaaaaataatacaaacc
agatgaggacatgtatgggaggggcattttactataggctctggatgtca
agtgggtgattagttggtgtaatggacttgcatacccaccaatacaaaag
caggggaattctttgattttgacccaagcctaaaagtagccagaattcat
cgaagaccagaagtttctggttgttgtgcatagtatatacctttgtcttt
atcccacaaagcctctatatgcttttagtaaccatgaaagatgcagtaga
taaatttctaacctcacacatacaaaagaaaacaaagatttttcacagat
ataaacagatacagggggctgtcagtggcacattgacgtttcttaaagtt
tccatcaaaataaacctaaagtttgtcatggatatcttaatggagatttt
tgtatgaacaaattttaaatgaatgtactgaaagcaagtaggtcaaaagc
attgagattagcaagaaagatcattagctgaacagataaatgagcaaagg
tggactcagttataggtaagaggataagaccagtgtctcctaggaatgaa
tggagtttaaggcatttgcaagctttctgggagtcaaagcaaagtacata
atgcattattattttgtcttagaaaggaagtgacaaagaacttagctata
agctcccattgatcactggttgggaaatatcctaatgggtattgaatatt
ccttttgcagctgcctgcatatgggaagatgatctttcactttggatagt
ccaccatacatactaagggaggcacagggagctatgcccccaggataaga
ccaaagcacaatcagagtcatgaactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_63923670_63924756
seq2: B6Ng01-093E06.g_68_1144

seq1  GAATTCCATCATTCTGTCTGCACCTCTTTTTCTAGTCCTTGCTTTATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCATTCTGTCTGCACCTCTTTTTCTAGTCCTTGCTTTATTTT  50

seq1  ATTTTCTATAGTTGACATTGGTACCTTCGGCTTCATGAAAATATTGCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTATAGTTGACATTGGTACCTTCGGCTTCATGAAAATATTGCAAC  100

seq1  AATGTGGCTCATGATAGGTGTGAATGAGGCCAAGACTCAAAGATGCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGCTCATGATAGGTGTGAATGAGGCCAAGACTCAAAGATGCATTC  150

seq1  TGCATTAGAATGGATGGAAATAACGACTCTGATTTATTTTAGATTGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTAGAATGGATGGAAATAACGACTCTGATTTATTTTAGATTGTTTG  200

seq1  TCTTTGATTTCTTTATTCATAGGAAAATAAAGAAAAAAATAATACAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGATTTCTTTATTCATAGGAAAATAAAGAAAAAAATAATACAAACC  250

seq1  AGATGAGGACATGTATGGGAGGGGCATTTTACTATAGGCTCTGGATGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGGACATGTATGGGAGGGGCATTTTACTATAGGCTCTGGATGTCA  300

seq1  AGTGGGTGATTAGTTGGTGTAATGGACTTGCATACCCACCAATACAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTGATTAGTTGGTGTAATGGACTTGCATACCCACCAATACAAAAG  350

seq1  CAGGGGAATTCTTTGATTTTGACCCAAGCCTAAAAGTAGCCAGAATTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAATTCTTTGATTTTGACCCAAGCCTAAAAGTAGCCAGAATTCAT  400

seq1  CGAAGACCAGAAGTTTCTGGTTGTTGTGCATAGTATATACCTTTGTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGACCAGAAGTTTCTGGTTGTTGTGCATAGTATATACCTTTGTCTTT  450

seq1  ATCCCACAAAGCCTCTATATGCTTTTAGTAACCATGAAAGATGCAGTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCACAAAGCCTCTATATGCTTTTAGTAACCATGAAAGATGCAGTAGA  500

seq1  TAAATTTCTAACCTCACACATACAAAAGAAAACAAAGATTTTTCACAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTCTAACCTCACACATACAAAAGAAAACAAAGATTTTTCACAGAT  550

seq1  ATAAACAGATACAGGGGGCTGTCAGTGGCACATTGACGTTTCTTAAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAGATACAGGGGGCTGTCAGTGGCACATTGACGTTTCTTAAAGTT  600

seq1  TCCATCAAAATAAACCTAAAGTTTGTCATGGATATCTTAATGGAGATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCAAAATAAACCTAAAGTTTGTCATGGATATCTTAATGGAGATTTT  650

seq1  TGTATGAACAAATTTTAAATGAATGTACTGAAAGCAAGTAGGTCAAAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGAACAAATTTTAAATGAATGTACTGAAAGCAAGTAGGTCAAAAGC  700

seq1  ATTGAGATTAGCAAGAAAGATCATTAGCTGAACAGATAAATGAGCAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGATTAGCAAGAAAGATCATTAGCTGAACAGATAAATGAGCAAAGG  750

seq1  TGGACTCAGTTATAGGTAAGAGGATAAGACCAGTGTCTCCTAGGAATGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCAGTTATAGGTAAGAGGATAAGACCAGTGTCTCCTAGGAATGAA  800

seq1  TGGAGTTTAAGGCAATTTGCAAGCTTTCTGGGAGTCAAAGCAAAGTACAT  850
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTTAAGGC-ATTTGCAAGCTTTCTGGGAGTCAAAGCAAAGTACAT  849

seq1  AATGCATTATTATTTTGTCTTAGAAAGGAAGGTGACAAAGAACTTAGCTA  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AATGCATTATTATTTTGTCTTAGAAAGGAA-GTGACAAAGAACTTAGCTA  898

seq1  TAAGCTCCCATTGATCACTGGTTGGGAAATATTCCTAATGGGTATTGAAT  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAAGCTCCCATTGATCACTGGTTGGGAAATA-TCCTAATGGGTATTGAAT  947

seq1  ATTCCTTTTGCAGGCTGCCTGGCATATGGGAAGGATGATCTTTAACTTTG  1000
      |||||||||||| ||||||| ||||||||||| |||||||||| ||||||
seq2  ATTCCTTTTGCA-GCTGCCT-GCATATGGGAA-GATGATCTTTCACTTTG  994

seq1  GATAAGTCCACCATACATACTAGTGGAAGCACAAGGAGCCTATGCCCCCA  1050
      ||| ||||||||||||||||||  ||| ||||| |||| |||||||||||
seq2  GAT-AGTCCACCATACATACTAAGGGAGGCACAGGGAG-CTATGCCCCCA  1042

seq1  GGATAAGACCAAAGCAACATATCAGAGTCATGAACTC  1087
      ||||||||||||||| ||| |||||||||||||||||
seq2  GGATAAGACCAAAGC-ACA-ATCAGAGTCATGAACTC  1077