BAC Information

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BAC

Clone NameB6Ng01-093I24
Chromosome16 (Build37)
Map Location 58,207,591 - 58,208,174
singlet/doubletsinglet
Overlap geneLOC100043477
Upstream geneTbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480, LOC629342
Downstream geneDcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093I24.bB6Ng01-093I24.g
ACCDH905018DH905019
length1,2231,000
definitionDH905018|Mus musculus domesticus DNA, BAC clone: B6Ng01-093I24, 5' end.DH905019|Mus musculus domesticus DNA, BAC clone: B6Ng01-093I24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcccccacctgatagtcaatcagcttatgtgccaaaaaatggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccagtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccggggttcactcaccttacagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaaaggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggagaaatttgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttga
atgatagacctaagctccgccttaagatcaacggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatttctacacattggtggcc
caaagcatggcccaccacagagtcatctcattcattacagggcctaggtt
atcaatcatgtcccactataagctccattgccttgacgtgggaatcctct
gaagggcagcaagggaaattcataccttatgtgctcccactcccggttaa
cctctggggaagggatattatgcagcatttgggccttattttgtccaatg
aaaacgccccatcgggagggtattcagctaaagcaaaaaatatcatggca
aagatgggttataaagaagaaaagggttaggacatcaagaacagggaagg
atagagcccatctcacctaatggaaaccaagacagacagggtctgggttt
tccttagtggccattgggcagcacgacccataccatgaaaacaggggact
cagtgtgggtcctcaatgcccttatcctctgaaaactagagcttgtgatt
cactgtagagaacaataaactagccatattgaccctctacctcacctgga
atactcaattttgtaataagaaagtcaggaagtggaaactgctcatgacc
tggcatatgagccatgactatgccatacagcttctgacttcgcttacact
ggctggattatattgaatttcag
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggactgggcgaagtg
ggcattctgggttctgatgatggtgagtggtcctggcttctgttagtaga
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcaa
tcagcaggcgtgggagacaagctctctcctctgagtttcagtggtcagag
cagtctctgcaggcaagctttcctcttttggggaaggtgtacagttatct
ggtgtttggacctcctcctgtctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccgttcgtctggagc
cgaagatggcgccgcctcagaagctctgtggctctcaccaggaaggtggc
cggccatctggagccgaagatcgcgccgcttcagaagctctgtggctctc
gccaggaaggtggtcggttgtctggagccgaagatggcgccgccccagaa
gctctgcgactctcgcccgtaccagaaacggctggcctctgtattccaca
cggtcacccgtgcagcctgccctccgcgggagtcccggagccaagaaggc
tcccgctggcgcctgtgacacaaacctctcaaggccggggcagacccctg
tgctctcactaagaagtggccggctgtctggagctgaagatggcgccgcc
tcagaggctctgcgactctcgcctgtaccagaaacggcctggccctctgt
attcaacacggtcacccgtgcagcctgcccttccgcggagtccctgcagc
ctgccctcggcggagtccccgagaaatattttaacacaaagggctacaag
acctgaaatcttggagataccaggataaggaaagtctggaaatgatgctt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58207591_58208174
seq2: B6Ng01-093I24.g_484_1069

seq1  TTGCTTTGGCCAGGAAGGTGGCCGTTCGTCTGGAGCCGAAGATGGCGCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTGGCCAGGAAGGTGGCCGTTCGTCTGGAGCCGAAGATGGCGCCG  50

seq1  CCTCAGAAGCTCTGTGGCTCTCACCAGGAAGGTGGCCGGCCATCTGGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAAGCTCTGTGGCTCTCACCAGGAAGGTGGCCGGCCATCTGGAGC  100

seq1  CGAAGATCGCGCCGCTTCAGAAGCTCTGTGGCTCTCGCCAGGAAGGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGATCGCGCCGCTTCAGAAGCTCTGTGGCTCTCGCCAGGAAGGTGGT  150

seq1  CGGTTGTCTGGAGCCGAAGATGGCGCCGCCCCAGAAGCTCTGCGACTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTGTCTGGAGCCGAAGATGGCGCCGCCCCAGAAGCTCTGCGACTCTC  200

seq1  GCCCGTACCAGAAACGGCTGGCCTCTGTATTCCACACGGTCACCCGTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGTACCAGAAACGGCTGGCCTCTGTATTCCACACGGTCACCCGTGCA  250

seq1  GCCTGCCCTCCGC-GGAGTCCCGGAGCCAAGAAGGCTCCCGCTGGCGCCT  299
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCCTCCGCGGGAGTCCCGGAGCCAAGAAGGCTCCCGCTGGCGCCT  300

seq1  GTGACACAAACCTCTC-AGGCC-GGGCAGACCCCTGTGCTCTCACTAAGA  347
      |||||||||||||||| ||||| |||||||||||||||||||||||||||
seq2  GTGACACAAACCTCTCAAGGCCGGGGCAGACCCCTGTGCTCTCACTAAGA  350

seq1  AGGTGGCCGGCTGTCTGGAGCTGAAGATGGCGCCGCCTCAGAGGCTCTGC  397
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-GTGGCCGGCTGTCTGGAGCTGAAGATGGCGCCGCCTCAGAGGCTCTGC  399

seq1  GACTCTCGCCTGTACCAGAAACGG-CTGG-CCTCTGTATTCCACACGGTC  445
      |||||||||||||||||||||||| |||| ||||||||||| ||||||||
seq2  GACTCTCGCCTGTACCAGAAACGGCCTGGCCCTCTGTATTCAACACGGTC  449

seq1  ACCCGTGCAGCCTGCCC-TCCGCGGAGTCCCTGCAGCCTGCCCTCCGCGG  494
      ||||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  ACCCGTGCAGCCTGCCCTTCCGCGGAGTCCCTGCAGCCTGCCCTCGGCGG  499

seq1  AGTCCCCGAGAAATATTTTAACACAAA-GGCTACAAAGACCTGAAATCTT  543
      ||||||||||||||||||||||||||| |||||| |||||||||||||||
seq2  AGTCCCCGAGAAATATTTTAACACAAAGGGCTAC-AAGACCTGAAATCTT  548

seq1  GGAGATACCCAGGATAAAGTGAAAGTCTGAAAATGATGCTT  584
      ||||||| |||||||||   ||||||||| |||||||||||
seq2  GGAGATA-CCAGGATAA--GGAAAGTCTGGAAATGATGCTT  586