BAC Information

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BAC

Clone NameB6Ng01-093L06
Chromosome16 (Build37)
Map Location 61,876,423 - 61,877,566
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043524, LOC668183
Downstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093L06.bB6Ng01-093L06.g
ACCDH905117DH905118
length1841,141
definitionDH905117|Mus musculus domesticus DNA, BAC clone: B6Ng01-093L06, 5' end.DH905118|Mus musculus domesticus DNA, BAC clone: B6Ng01-093L06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tctttcactggtacagcaagtcttcacaggttcaaggacctttcctccca
ttgatgcaccacaaggctattctctgcttcatatgtggctagagccatgg
gtccctccatgtttactccttggttggtggtttagtccctgggaactctg
ggggatatgattggttgatattgttgtggtgttt
gaattcacccctcagaatctcactaactgagaaaagtcattcatcctcaa
ttatgagaggggaaaaaggatgtgaagttcaagattagcctcagctacaa
tgtaatattcaatccagcctgagctacatctgatactgactcaaaaaata
tgaaggaaacaaaaacaaaaatagtaaatataactattatatacaacaga
gtttatttcaatttaagagcaaagaataaaagtagcttaaaagtagattt
ttaaaacttcttttgggtgtttttatcaaggaattaatttatataaaatt
ttcctgaggaatatgactggtttgctgggttttaactagtatcataaaaa
gtcaagactgcagtaatgaagacattaacacaaagcaaaactgtatttgc
aacacctaatgggacccatattgctcatttcattactggggcgggtagtt
tggaaaactgcttttctataaaatcttattcaatttgtcaaaaaatcaca
gagagtctctgtgacagtttccatctgctgcattaagagacttctctgaa
gtgctgtgagtgtgaaatgtatctgtgagtgtaggaatatgtattagaat
tcagttagaaaatggaggcaagaagtttttctctacagtcaatgaccagc
catgtgttgctttgtaggtttacaatcctaggaatgaatttctatgtcag
ggggccagcccaagggatggtcaggtcccacagagaagataaagagtctg
agagggaggagtgagtcaggcaagagggaatcttgctgtctgatggactg
gcagtcagattgatcctttattacataagaactcagtaggcagggataga
ttcatgttttttcaagacatagatcacatcaatttttgtccccggacatg
tgttttaatatcgtcttggtcataagtttagtcatcattaatcaactgtg
acagcagagatttatcttttacaatcgttttcctcataaacccttaagcc
caacttttaagaatctagaggttatttttgccaaacatgacagtctgctt
ccaaggttgtgtcctttctggtttcagggcatataacagaaagaaataag
caagtcggctctggcagatgcctagttcccaagcagtatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61876423_61877566
seq2: B6Ng01-093L06.g_67_1207

seq1  GAATTCACCCCTCAGAATCTCACTAACTGAGAAAAGTCATTCATCCTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCCTCAGAATCTCACTAACTGAGAAAAGTCATTCATCCTCAA  50

seq1  TTATGAGAGGGGAAAAAGGATGTGAAGTTCAAGATTAGCCTCAGCTACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGAGGGGAAAAAGGATGTGAAGTTCAAGATTAGCCTCAGCTACAA  100

seq1  TGTAATATTCAATCCAGCCTGAGCTACATCTGATACTGACTCAAAAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATATTCAATCCAGCCTGAGCTACATCTGATACTGACTCAAAAAATA  150

seq1  TGAAGGAAACAAAAACAAAAATAGTAAATATAACTATTATATACAACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAAACAAAAACAAAAATAGTAAATATAACTATTATATACAACAGA  200

seq1  GTTTATTTCAATTTAAGAGCAAAGAATAAAAGTAGCTTAAAAGTAGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTCAATTTAAGAGCAAAGAATAAAAGTAGCTTAAAAGTAGATTT  250

seq1  TTAAAACTTCTTTTGGGTGTTTTTATCAAGGAATTAATTTATATAAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACTTCTTTTGGGTGTTTTTATCAAGGAATTAATTTATATAAAATT  300

seq1  TTCCTGAGGAATATGACTGGTTTGCTGGGTTTTAACTAGTATCATAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAGGAATATGACTGGTTTGCTGGGTTTTAACTAGTATCATAAAAA  350

seq1  GTCAAGACTGCAGTAATGAAGACATTAACACAAAGCAAAACTGTATTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGACTGCAGTAATGAAGACATTAACACAAAGCAAAACTGTATTTGC  400

seq1  AACACCTAATGGGACCCATATTGCTCATTTCATTACTGGGGCGGGTAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTAATGGGACCCATATTGCTCATTTCATTACTGGGGCGGGTAGTT  450

seq1  TGGAAAACTGCTTTTCTATAAAATCTTATTCAATTTGTCAAAAAATCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAACTGCTTTTCTATAAAATCTTATTCAATTTGTCAAAAAATCACA  500

seq1  GAGAGTCTCTGTGACAGTTTCCATCTGCTGCATTAAGAGACTTCTCTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTCTCTGTGACAGTTTCCATCTGCTGCATTAAGAGACTTCTCTGAA  550

seq1  GTGCTGTGAGTGTGAAATGTATCTGTGAGTGTAGGAATATGTATTAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTGAGTGTGAAATGTATCTGTGAGTGTAGGAATATGTATTAGAAT  600

seq1  TCAGTTAGAAAATGGAGGCAAGAAGTTTTTCTCTACAGTCAATGACCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAGAAAATGGAGGCAAGAAGTTTTTCTCTACAGTCAATGACCAGC  650

seq1  CATGTGTTGCTTTGTAGGTTTACAATCCTAGGAATGAATTTCTATGTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTTGCTTTGTAGGTTTACAATCCTAGGAATGAATTTCTATGTCAG  700

seq1  GGGGCCAGCCCAAGGGATGGTCAGGTCCCACAGAGAAGATAAAGAGTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCAGCCCAAGGGATGGTCAGGTCCCACAGAGAAGATAAAGAGTCTG  750

seq1  AGAGGGAGGAGTGAGTCAGGCAAGAGGGAATCTTGCTGTCTGATGGACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGGAGTGAGTCAGGCAAGAGGGAATCTTGCTGTCTGATGGACTG  800

seq1  GCAGTCAGATTGATCCTTTATTACATAAGAACTCAGTAGGCAGGGATAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAGATTGATCCTTTATTACATAAGAACTCAGTAGGCAGGGATAGA  850

seq1  TTCATGTTTTTTCAAGACATAGATCACATCAATTTTTGTCCCCGGACATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTTTTTTCAAGACATAGATCACATCAATTTTTGTCCCCGGACATG  900

seq1  TGTTTTAATATCGTCTTGGTCATAAGTTTAGTCATCATTAATCAACTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAATATCGTCTTGGTCATAAGTTTAGTCATCATTAATCAACTGTG  950

seq1  ACAGCAGAGATTTATCTTTTACAATCGTTTTCCTCATAAACCCTAAAGCC  1000
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACAGCAGAGATTTATCTTTTACAATCGTTTTCCTCATAAACCCTTAAGCC  1000

seq1  CAACTTTTAAGAATCTAGAGGTATATTTTGCCAAAACATGACAGTCTGCT  1050
      |||||||||||||||||||||| ||||||  | |||||||||||||||||
seq2  CAACTTTTAAGAATCTAGAGGT-TATTTTTGCCAAACATGACAGTCTGCT  1049

seq1  CCCAGGTTGGTAGCTCTTCTGGTTTCAAGGGCACTAGACAGAAAGAAAAT  1100
       ||| | | ||  |  |||||||||| ||||||    |||||||| ||||
seq2  TCCAAGGTTGTGTCCTTTCTGGTTTC-AGGGCATATAACAGAAAG-AAAT  1097

seq1  AGGCAAGTCGG-TCTGGGCAGAATGCC-ATGTCCCAAGCAGTATAT  1144
      | ||||||||| ||| ||||| ||||| |  |||||||||||||||
seq2  AAGCAAGTCGGCTCT-GGCAG-ATGCCTAGTTCCCAAGCAGTATAT  1141