BAC Information

Click to search

BAC

Clone NameB6Ng01-093M22
Chromosome16 (Build37)
Map Location 47,756,814 - 47,757,938
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628757, LOC628776
Downstream geneEG667741, EG639644, EG637273, Dppa4, Dppa2, EG433023, Morc1, Trat1, EG667501
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093M22.bB6Ng01-093M22.g
ACCDH905190DH905191
length1,1151,087
definitionDH905190|Mus musculus domesticus DNA, BAC clone: B6Ng01-093M22, 5' end.DH905191|Mus musculus domesticus DNA, BAC clone: B6Ng01-093M22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttgcctgtattgaattttcgaaatgtatacttcagtagagtt
caataaatgatatcttagaaatataaacaaatagcttttatgacatagga
aacatctaattctataatgcactgaataaagcttttcaagcagcaagaga
tttggaaggattttagtggctacgttgtaattcacctgcaagagaaagaa
catatcaagagtggagaaagtacaaaggacaagttgtctccataggagag
acaaattcatactaaccacctattaatcaatttcatattgatctaatttt
gttcaacattctctgatcagttgttctaaggagacagtttctctctagcc
actaagcaagggatgcctgcttgctctccctaaatccaagggatcagcaa
tgatctgaaatgcaatcctaggtactataattcagaaggatacgtctcaa
gacttccagtggaaaaacttctttggaatatctgctgatcctattgtttg
taaatgcaatgcacagaggagggtcagtcagcctgagactagagaaaaca
aaagcatcatgataaagatggtagaaagtaaataggaaagaggttgtgat
ttatgatgaatcatcacgccaccaaatcagtcagcactagaattactctc
cctgtctgtttttatgcaacaacaactctgtttcctagaaatcatgtttc
ttgaaaacatcctaaaggctatagtatatttggaagatggtcaaatgtca
tttgaaacttgggacatatattagaggaacaaagtttgaaagaatgaatg
ataagataaaagaaacagacatctagaagcacagcttaaagttaaaccag
aggtaatttctccctcttgtaagagactccctgtcttatgtctctgaaat
catgaaaggaggaaagtggcttcaactctgaccctcctgatcagagaaat
gagaactgatagaattaaagaaaggaaataaagcaaataaaatgctaaag
tgagcagaaagaaaagctagtgtcgaggaaacgtactgaaattgtttttt
aatgtatccatgaaagagaattgtcctacaaaagtcacagtatttcaagt
aaaactgcaagatga
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagccagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccattggaaaggagttacagagacggagtttggagctgagat
gaaaggatggaccatgtagagactgccatatccagggatccaccccataa
tcagcatccaaacgctgacaccattgcatacactagcaagattttattga
aaaggacgcagatgtagctgtctcttgtgagactatgccggggcccagca
aacacagaagtgtgatgctcacagttagctaatggatggatcatagggct
ccccatggaagggagctagagtaaagtagcccaaggagctaaaggaattc
tgcatcctattaggtggaacaacatttatgagcttaccagtaccccggaa
gcctctttgaacctaggctgcctaagatacaaaagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_47756814_47757938
seq2: B6Ng01-093M22.b_45_1159

seq1  GAATTCATTTGCCTGTATTGAATTTT-GAAATGTATACTTCAGTAGAGTT  49
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAATTCATTTGCCTGTATTGAATTTTCGAAATGTATACTTCAGTAGAGTT  50

seq1  CAATAAATGATATCTTAGAAATATAAACAAATAGCTTTTATGACATAGGA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATGATATCTTAGAAATATAAACAAATAGCTTTTATGACATAGGA  100

seq1  AACATCTAATTCTATAATGCACTGAATAAAGCTTTTCAAGCAGCAAGAGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTAATTCTATAATGCACTGAATAAAGCTTTTCAAGCAGCAAGAGA  150

seq1  TTTGGAAGGATTTTAGTGGCTACGTTGTAATTCACCTGCAAGAGAAAGAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAGGATTTTAGTGGCTACGTTGTAATTCACCTGCAAGAGAAAGAA  200

seq1  CATATCAAGAGTGGAGAAAGTACAAAGGACAAGTTGTCTCCATAGGAGAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCAAGAGTGGAGAAAGTACAAAGGACAAGTTGTCTCCATAGGAGAG  250

seq1  ACAAATTCATACTAACCACCTATTAATCAATTTCATATTGATCTAATTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTCATACTAACCACCTATTAATCAATTTCATATTGATCTAATTTT  300

seq1  GTTCAACATTCTCTGATCAGTTGTTCTAAGGAGACAGTTTCTCTCTAGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACATTCTCTGATCAGTTGTTCTAAGGAGACAGTTTCTCTCTAGCC  350

seq1  ACTAAGCAAGGGATGCCTGCTTGCTCTCCCTAAATCCAAGGGATCAGCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGCAAGGGATGCCTGCTTGCTCTCCCTAAATCCAAGGGATCAGCAA  400

seq1  TGATCTGAAATGCAATCCTAGGTACTATAATTCAGAAGGATACGTCTCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGAAATGCAATCCTAGGTACTATAATTCAGAAGGATACGTCTCAA  450

seq1  GACTTCCAGTGGAAAAACTTCTTTGGAATATCTGCTGATCCTATTGTTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCAGTGGAAAAACTTCTTTGGAATATCTGCTGATCCTATTGTTTG  500

seq1  TAAATGCAATGCACAGAGGAGGGTCAGTCAGCCTGAGACTAGAGAAAACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCAATGCACAGAGGAGGGTCAGTCAGCCTGAGACTAGAGAAAACA  550

seq1  AAAGCATCATGATAAAGATGGTAGAAAGTAAATAGGAAAGAGGTTGTGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATCATGATAAAGATGGTAGAAAGTAAATAGGAAAGAGGTTGTGAT  600

seq1  TTATGATGAATCATCACGCCACCAAATCAGTCAGCACTAGAATTACTCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATGAATCATCACGCCACCAAATCAGTCAGCACTAGAATTACTCTC  650

seq1  CCTGTCTGTTTTTATGCAACAACAACTCTGTTTCCTAGAAATCATGTTTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTGTTTTTATGCAACAACAACTCTGTTTCCTAGAAATCATGTTTC  700

seq1  TTGAAAACATCCTAAAGGCTATAGTATATTTGGAAGATGGTCAAATGTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAACATCCTAAAGGCTATAGTATATTTGGAAGATGGTCAAATGTCA  750

seq1  TTTGAAACTTGGGACATATATTAGAGGAACAAAGTTTGAAAGAATGAATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAACTTGGGACATATATTAGAGGAACAAAGTTTGAAAGAATGAATG  800

seq1  ATAAGATAAAAGAAACAGACATCTAGAAGCACAGCTTAAAGTTAAAACCA  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATAAGATAAAAGAAACAGACATCTAGAAGCACAGCTTAAAGTT-AAACCA  849

seq1  GAGGTAATTTCTCCCTCTTGTAAGAGACTCCCTGTCTTATGTCTCTGAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAATTTCTCCCTCTTGTAAGAGACTCCCTGTCTTATGTCTCTGAAA  899

seq1  TCATG-AAGGAGGAAAGTGGGCTTCAACTCTGACCCTCCTGATCAGAGAA  948
      ||||| |||||||||||| |||||||||||||||||||||||||||||||
seq2  TCATGAAAGGAGGAAAGT-GGCTTCAACTCTGACCCTCCTGATCAGAGAA  948

seq1  ATGAGAACTGATAGAATTAAAGAAAGGAAATAAAAGCAAAATAAAATGCT  998
      ||||||||||||||||||||||||||||||| ||||| ||||||||||||
seq2  ATGAGAACTGATAGAATTAAAGAAAGGAAAT-AAAGC-AAATAAAATGCT  996

seq1  AAAGTGAGCAGAAAGGAAAAGCTAGTGTCGAGGAAAACGTACTGAAATTG  1048
      |||||||||||||| |||||||||||||||||| ||||||||||||||||
seq2  AAAGTGAGCAGAAA-GAAAAGCTAGTGTCGAGG-AAACGTACTGAAATTG  1044

seq1  TTTTTTAATTGTATCCCATGAAAAGAG-ATTGTCCCTACAAAAAGTCACA  1097
      |||||||| ||||| ||||| |||||| ||||| ||||| ||||||||||
seq2  TTTTTTAA-TGTAT-CCATG-AAAGAGAATTGT-CCTAC-AAAAGTCACA  1089

seq1  GTATTTCAGAGTAAAAACTGCAAGATGA  1125
      |||||||| ||| |||||||||||||||
seq2  GTATTTCA-AGT-AAAACTGCAAGATGA  1115