BAC Information

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BAC

Clone NameB6Ng01-094G06
Chromosome16 (Build37)
Map Location 91,913,213 - 92,057,043
singlet/doubletdoublet
Overlap geneItsn1, Atp5o
Upstream geneLOC665863, 1110004E09Rik, 4930534H18Rik, Synj1, 1810007M14Rik, 4932438H23Rik, H3f3a-ps2, Olig2, Olig1, Ifnar2, Il10rb, Ifnar1, LOC665939, LOC665947, Ifngr2, Tmem50b, ORF28, Gart, Son, Donson, Cryzl1, LOC100040653
Downstream geneMrps6, Slc5a3, Kcne2, 1190017O12Rik, 4930563D23Rik, Kcne1, Dscr1, 2410124H12Rik, Clic6, Runx1, EG666023
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094G06.bB6Ng01-094G06.g
ACCDH905627DH905628
length1,134948
definitionDH905627|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G06, 5' end.DH905628|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,055,906 - 92,057,043)(91,913,213 - 91,914,165)
sequence
gaattccagatctgtgtgacatcccacttaaactgtccttcctgtggccc
agtttaggaatgtgaagataagagtctcacgtggttgagccaagccaaac
accaagcaacaccctgaggtgaccagcctggactgcctcccgttggaagc
accacagcttttccctgatacccagggaccagtgaagtcctagttctcta
gacaaatggggtgaggaaattagcctgactgaacaatgcctcagggcaga
cagcaccccacaaccctcccaagctgttggccacccacagactcatccca
tttcttaacgtggaaaagaaatcagctatcctaagtcccccgcccctttc
agagttttaaataagtggctatggctttgttaattttattgttaaaatta
atgctgatgcaaattgaaatttatcaaaaataattttaaactatttatac
tgttgggtaagcatgtagaatcataagccatttctatagtatttaattta
ttgatctttaaaaaatatcttttaggatcttgggaaaaaagatctaatac
ggtagatacgtaagattttattggccagaggttttggctaattttcaagt
aaagctttctgaggagtcataggaagagagagtaaaggcaaaagttgaaa
tccaaggtgctctggtcagttcatccccttgccatctcatcttctactac
tgtataaggagagatttgaccttgagcttttcaccataattctcaagata
gctgactatcgtcatcatcaccatcaccatcatcaccatcatcaccagac
ctaacattctgccattcattgtgagccaggaagtgcttttcatgtattaa
tattcatttctgcccaggccgtcactaccacatgtctccaacagtaccca
gacctgctctacccctttgtctgtgtctgcccaggccgtcactacaggtc
tcctcacctgtccaggagcagtttcccaggatcctggctgccatcttttt
ttttttaatatttatttatttatttatttatttattatttataatatgta
agtacactgtagctgtcttcagaccctctcaaagaaggcatcagatttcg
ttaccgatcgtttgtgagcaccatgtggttctgg
gaattcaagatagaataggtagtgtggagaaacgctaagaaaatccatta
ctggtttgagggaaagacctttgggaacccgtgagccccacatgtggggt
gggaaaatgggcgatgctcctgggcatacaacaacctcttagtcatagga
acacacgcactttttgcgagaatcaggagtgtatgaccataggccaggct
tttttgtctgagttctttgggttttctctcccttaaatgctaaaagatag
gctggttatctagataacttgatttgctagtgagaagtgcaggctgtttt
ggtccctcgtttgcatctccagtctgtggtcatggcctggcctttgcatg
tctcaggctcctgggctcaggctttcctgtgttgggtggcctggcctttg
catgtctcaggctcctgggctcaggctctcctgtgttgggtggtgttcct
ttttatggtaggttctcagattttaactaggtttctagaagtactttgta
aatggtagtgtctcggtgacagaatagccactctgctgaaatctgaatgc
tccatgtgaccccagaaggtccctctccgtgtgtgtgtgtgtgtgtgtgt
gtgtgtttcaagtgatttctcaaaacgtgtatggggcaaaggacaacagt
ttacatttcatacttccaagaagcacttagagtttatttattgaagatag
tgttgacttttgtatcaagaacaacagacacacctattttttgaaacaag
ccaataaactcttcaggtagcagctttcagctgaacatgaggtagacttt
aacttcgagcatgcgttggcttaccactttcccagcagaaaacactatca
aaacactacacattcatgtttctgttggtggtaagaaactgttttaaatg
atcctataactagatctggaccatggtttcttggtctggaacaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_92055906_92057043
seq2: B6Ng01-094G06.b_44_1177 (reverse)

seq1  CCAGAAACCACATGGTGGCTCAC-AACGATCCGTAACGAAATCTGATGCC  49
      |||| ||||||||||| |||||| ||||||| ||||||||||||||||||
seq2  CCAG-AACCACATGGT-GCTCACAAACGATCGGTAACGAAATCTGATGCC  48

seq1  CTCTTTTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAAT  99
       |||||  ||| ||||||||||||||||||||||||||||||| ||||||
seq2  TTCTTTGAGAGGGTCTGAAGACAGCTACAGTGTACTTACATATTATAAAT  98

seq1  AAATAAATAAATAAATAAATAAATAAATATTAAAAAAAAAAAAGATGGCA  149
       |||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  -AATAAATAAATAAATAAATAAATAAATATT-AAAAAAAAAAAGATGGCA  146

seq1  GCCAGGATCCTGGGAAACTGCTCCTGGACAGGTGAGGAGACCCTGTAGTG  199
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCCAGGATCCTGGGAAACTGCTCCTGGACAGGTGAGGAGA-CCTGTAGTG  195

seq1  ACGGCCTGGGCAGACACAGACAAAGGGGTAGAGCAGGTCTGGGTACTGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCCTGGGCAGACACAGACAAAGGGGTAGAGCAGGTCTGGGTACTGTT  245

seq1  GGAGACATGTGGTAGTGACGGCCTGGGCAGAAATGAATATTAATACATGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACATGTGGTAGTGACGGCCTGGGCAGAAATGAATATTAATACATGA  295

seq1  AAAGCACTTCCTGGCTCACAATGAATGGCAGAATGTTAGGTCTGGTGATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACTTCCTGGCTCACAATGAATGGCAGAATGTTAGGTCTGGTGATG  345

seq1  ATGGTGATGATGGTGATGGTGATGATGACGATAGTCAGCTATCTTGAGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGATGATGGTGATGGTGATGATGACGATAGTCAGCTATCTTGAGAA  395

seq1  TTATGGTGAAAAGCTCAAGGTCAAATCTCTCCTTATACAGTAGTAGAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTGAAAAGCTCAAGGTCAAATCTCTCCTTATACAGTAGTAGAAGA  445

seq1  TGAGATGGCAAGGGGATGAACTGACCAGAGCACCTTGGATTTCAACTTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGGCAAGGGGATGAACTGACCAGAGCACCTTGGATTTCAACTTTT  495

seq1  GCCTTTACTCTCTCTTCCTATGACTCCTCAGAAAGCTTTACTTGAAAATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTACTCTCTCTTCCTATGACTCCTCAGAAAGCTTTACTTGAAAATT  545

seq1  AGCCAAAACCTCTGGCCAATAAAATCTTACGTATCTACCGTATTAGATCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAACCTCTGGCCAATAAAATCTTACGTATCTACCGTATTAGATCT  595

seq1  TTTTTCCCAAGATCCTAAAAGATATTTTTTAAAGATCAATAAATTAAATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCCAAGATCCTAAAAGATATTTTTTAAAGATCAATAAATTAAATA  645

seq1  CTATAGAAATGGCTTATGATTCTACATGCTTACCCAACAGTATAAATAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGAAATGGCTTATGATTCTACATGCTTACCCAACAGTATAAATAGT  695

seq1  TTAAAATTATTTTTGATAAATTTCAATTTGCATCAGCATTAATTTTAACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTATTTTTGATAAATTTCAATTTGCATCAGCATTAATTTTAACA  745

seq1  ATAAAATTAACAAAGCCATAGCCACTTATTTAAAACTCTGAAAGGGGCGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTAACAAAGCCATAGCCACTTATTTAAAACTCTGAAAGGGGCGG  795

seq1  GGGACTTAGGATAGCTGATTTCTTTTCCACGTTAAGAAATGGGATGAGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTAGGATAGCTGATTTCTTTTCCACGTTAAGAAATGGGATGAGTC  845

seq1  TGTGGGTGGCCAACAGCTTGGGAGGGTTGTGGGGTGCTGTCTGCCCTGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTGGCCAACAGCTTGGGAGGGTTGTGGGGTGCTGTCTGCCCTGAG  895

seq1  GCATTGTTCAGTCAGGCTAATTTCCTCACCCCATTTGTCTAGAGAACTAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTTCAGTCAGGCTAATTTCCTCACCCCATTTGTCTAGAGAACTAG  945

seq1  GACTTCACTGGTCCCTGGGTATCAGGGAAAAGCTGTGGTGCTTCCAACGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCACTGGTCCCTGGGTATCAGGGAAAAGCTGTGGTGCTTCCAACGG  995

seq1  GAGGCAGTCCAGGCTGGTCACCTCAGGGTGTTGCTTGGTGTTTGGCTTGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGTCCAGGCTGGTCACCTCAGGGTGTTGCTTGGTGTTTGGCTTGG  1045

seq1  CTCAACCACGTGAGACTCTTATCTTCACATTCCTAAACTGGGCCACAGGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCACGTGAGACTCTTATCTTCACATTCCTAAACTGGGCCACAGGA  1095

seq1  AGGACAGTTTAAGTGGGATGTCACACAGATCTGGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGTTTAAGTGGGATGTCACACAGATCTGGAATTC  1134

seq1: chr16_91913213_91914165
seq2: B6Ng01-094G06.g_71_1018

seq1  GAATTCAAGATAGAATAGGTAGTGTGGAGAAACGCTAAGAAAATCCATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGATAGAATAGGTAGTGTGGAGAAACGCTAAGAAAATCCATTA  50

seq1  CTGGTTTGAGGGAAAGACCTTTGGGAACCCGTGAGCCCCACATGTGGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTGAGGGAAAGACCTTTGGGAACCCGTGAGCCCCACATGTGGGGT  100

seq1  GGGAAAATGGGCGATGCTCCTGGGCATACAACAACCTCTTAGTCATAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAATGGGCGATGCTCCTGGGCATACAACAACCTCTTAGTCATAGGA  150

seq1  ACACACGCACTTTTTGCGAGAATCAGGAGTGTATGACCATAGGCCAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACGCACTTTTTGCGAGAATCAGGAGTGTATGACCATAGGCCAGGCT  200

seq1  TTTTTGTCTGAGTTCTTTGGGTTTTCTCTCCCTTAAATGCTAAAAGATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTCTGAGTTCTTTGGGTTTTCTCTCCCTTAAATGCTAAAAGATAG  250

seq1  GCTGGTTATCTAGATAACTTGATTTGCTAGTGAGAAGTGCAGGCTGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTTATCTAGATAACTTGATTTGCTAGTGAGAAGTGCAGGCTGTTTT  300

seq1  GGTCCCTCGTTTGCATCTCCAGTCTGTGGTCATGGCCTGGCCTTTGCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCTCGTTTGCATCTCCAGTCTGTGGTCATGGCCTGGCCTTTGCATG  350

seq1  TCTCAGGCTCCTGGGCTCAGGCTTTCCTGTGTTGGGTGGCCTGGCCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGCTCCTGGGCTCAGGCTTTCCTGTGTTGGGTGGCCTGGCCTTTG  400

seq1  CATGTCTCAGGCTCCTGGGCTCAGGCTCTCCTGTGTTGGGTGGTGTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTCAGGCTCCTGGGCTCAGGCTCTCCTGTGTTGGGTGGTGTTCCT  450

seq1  TTTTATGGTAGGTTCTCAGATTTTAACTAGGTTTCTAGAAGTACTTTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGGTAGGTTCTCAGATTTTAACTAGGTTTCTAGAAGTACTTTGTA  500

seq1  AATGGTAGTGTCTCGGTGACAGAATAGCCACTCTGCTGAAATCTGAATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTAGTGTCTCGGTGACAGAATAGCCACTCTGCTGAAATCTGAATGC  550

seq1  TCCATGTGACCCCAGAAGGTCCCTCTCCGTGTGTGTGTGTGTGTGTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTGACCCCAGAAGGTCCCTCTCCGTGTGTGTGTGTGTGTGTGTGT  600

seq1  GTGTGTTTCAAGTGATTTCTCAAAACGTGTATGGGGCAAAGGACAACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTCAAGTGATTTCTCAAAACGTGTATGGGGCAAAGGACAACAGT  650

seq1  TTACATTTCATACTTCCAAGAAGCACTTAGAGTTTATTTATTGAAGATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTCATACTTCCAAGAAGCACTTAGAGTTTATTTATTGAAGATAG  700

seq1  TGTTGACTTTTGTATCAAGAACAACAGACACACCTATTTTTTGAAACAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACTTTTGTATCAAGAACAACAGACACACCTATTTTTTGAAACAAG  750

seq1  CCAATAAACTCTTCAGGTAGCAGCTTTCAGCTGAACATGAGGTAGACTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAAACTCTTCAGGTAGCAGCTTTCAGCTGAACATGAGGTAGACTTT  800

seq1  AACTTCGAGCATGCGTTGGCTTACCACTTTCCCAGCAGAAAACACTATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCGAGCATGCGTTGGCTTACCACTTTCCCAGCAGAAAACACTATCA  850

seq1  AAACACTACACATTCATGTTTCTGTTGTTGTTAAGAAACTGTTTTAAATG  900
      ||||||||||||||||||||||||||| || |||||||||||||||||||
seq2  AAACACTACACATTCATGTTTCTGTTGGTGGTAAGAAACTGTTTTAAATG  900

seq1  ATACCTATAACTAGATCTGTGACCCATGGTTTCTTGGTTCTGGAACCAGG  950
      || |||||||||||||||| || |||||||||||||| ||||||| ||||
seq2  AT-CCTATAACTAGATCTG-GA-CCATGGTTTCTTGG-TCTGGAA-CAGG  945

seq1  GGG  953
      |||
seq2  GGG  948