BAC Information

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BAC

Clone NameB6Ng01-094H24
Chromosome16 (Build37)
Map Location 70,251,972 - 70,252,966
singlet/doubletsinglet
Overlap genenone
Upstream geneSpeer2, EG664930
Downstream geneGbe1, D16Ertd519e, LOC100039231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094H24.bB6Ng01-094H24.g
ACCDH905706DH905707
length1,1731,006
definitionDH905706|Mus musculus domesticus DNA, BAC clone: B6Ng01-094H24, 5' end.DH905707|Mus musculus domesticus DNA, BAC clone: B6Ng01-094H24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctctacatgcagacatccagtttgatcagcaccatttttttttg
aagatgctgtcattttccagggtgtatttttttgtttctctatcaaaaaa
tcaggtatcagtagatgtgagaagttacatatgagttttcaatttgatcc
cattggtaacaatgtctgctttggtatcaatgtgctgttcatattactaa
agctctagttaagctaagtctagtaaaatcatagtttaacgtcagggacg
gtgctaccttctgctgtttttattgttctggattggttttaactatccta
ggggttctttctttctttttgtacaaagctaaaaattgttctttcaaaat
ttgtgaaaaatcacggaatttgattggggattgcattgaatctatatgct
ttgctgttggtttgtgaatttgttatgatttgatttgttttttggtagga
tgtttttttatttgcttttactatattaagcctgttgatccatgatcatg
ggagatctttctattttctggtatctcctttaattacattaatatctaaa
agcttgacttttacaagttttcacttgcttaattagagttacccaagata
ttttatatcttgggaagctactgtgaaaggtgttgttttccttatatgtt
tatcagtctatttatcatttatacaaagaagggttacttttgtaacctac
tactttgctgaaagtgtttataagctgtagcaattccctggtgtgtaaat
gtcacttttatttcctagatgaattatgagatgagagctgtatccaagct
gtgtaaatacacagcttggggctgggtgcagaaattttttcttctctgtt
tgaacttccctaaggcgtacatctggaagcttctagtctccatacaatct
agtcttcccgacgactggattaatctggcttctcttggcttcagaactga
ggtgattctgcttggccccatactaaactttgggcaacatattctattct
tctggctcctctccctctctggctaattcaatacttcaactgtttctagc
ttgtttctctcgtaaattaccacgtgaaaaatgccatttcacacaccccc
ccccattacccataaacatcttttttctttccctcctaatggctataaaa
agaatacgtctcctttcttcgct
gaattcaaaaattaatggcagagggcagcttacacataatcttagggttt
tcaggaaaagcttgtgaaggaaactatatttgggcattcaaactaagtta
ataatgggagaaaatgctggaagatcctttgagttatgaacaacagaaga
taagggaacttgcaaaggaactacatattttaaatgctgagtaaacccag
gcacacttggcaagatgaaatggtaatttgccaggaggttaagagagtag
tagagaaagttagagagataaataaatggctcaaaactgtttttactctg
tagataaactaggaattattgaatatattgttttgttcagtaatgtccag
tcttgctaaatttattctcagctatcctactatccctattttggaccaga
cactcctcaaacttgttgaattattgcagccttggcctcccctcctaaat
ttgcaggaagtataggcgtgtggcaccataccaagcttcactaaggactt
taagtagaaaactattgtataatatacatctctgctttccattttagcca
ttgtactttataagacctagagatagtattcttcatcaatgcttagagac
tcgtgcaccaaaaaaataggcattcaaaacaaacaaacaaacaaaaatag
agcaggctttcatttctcataaccttgggcagtgatgtcaagaatcagat
ggattgattgttgaacccctcagtcagctctgggagggggtttgcaaagt
aaggccttagtgaggctgttgaaagagattttcgaaaacttccatatttt
agtgtacttgagttcttcttgatattagatttactatcgttaaaaaaaca
ggaggcctgtaaaccaagttaagaaaaatgttacatttcctgttactggc
tatgacttgcactaaagtcacctccagaaaaaaatttctaatcatcatga
ataaaaggaaccttttcaaacatgtaatcataaactactaatattttatg
tgggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_70251972_70252966
seq2: B6Ng01-094H24.g_69_1071 (reverse)

seq1  CCACATAAAATATTAAGTAGTTTAATGATTACATTGTTTGAAAAGG-TCC  49
      |||||||||||||| |||||||| ||||||||| |||||||||||| |||
seq2  CCACATAAAATATT-AGTAGTTT-ATGATTACA-TGTTTGAAAAGGTTCC  47

seq1  TTTTATTCATGATGATTAGAAA-TTTTTTCTGGA-GTGACTTTAGTGCAA  97
      |||||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  TTTTATTCATGATGATTAGAAATTTTTTTCTGGAGGTGACTTTAGTGCAA  97

seq1  GTCATAGCCAGTAACA-GAAATGTAACATTTTTCTT-ACCTGGTTTACA-  144
      |||||||||||||||| ||||||||||||||||||| || ||||||||| 
seq2  GTCATAGCCAGTAACAGGAAATGTAACATTTTTCTTAACTTGGTTTACAG  147

seq1  GCCTCCTG-TTTTGTAACGATAGTAAATCTAATATCAAGAAGAACTCAAG  193
      |||||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTGTTTTTTTAACGATAGTAAATCTAATATCAAGAAGAACTCAAG  197

seq1  TACACTAAAATAT-GAAGTTTTCGAAAATCTCTTTCAACAGCCTCACTAA  242
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TACACTAAAATATGGAAGTTTTCGAAAATCTCTTTCAACAGCCTCACTAA  247

seq1  GGCCTTAC-TTGCAAACCCCCT-CCAGAGCTGACTGAGGGGTTCAACAAT  290
      |||||||| ||||||||||||| |||||||||||||||||||||||||||
seq2  GGCCTTACTTTGCAAACCCCCTCCCAGAGCTGACTGAGGGGTTCAACAAT  297

seq1  CAATCCATCTGATTCTTGACATCACTGCCCAAGGTTATGAGAAATGAAAG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCATCTGATTCTTGACATCACTGCCCAAGGTTATGAGAAATGAAAG  347

seq1  CCTGCTCTATTTTTGTTTGTTTGTTTGTTTTGAATGCCTA-TTTTTTGGT  389
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCTGCTCTATTTTTGTTTGTTTGTTTGTTTTGAATGCCTATTTTTTTGGT  397

seq1  GCACGAGTCTCTAAGCATTGATGAAGAATACTATCTCTAGGTCTTATAAA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGAGTCTCTAAGCATTGATGAAGAATACTATCTCTAGGTCTTATAAA  447

seq1  GTACAATGGCTAAAATGGAAAGCAGAGATGTATATTATACAATAGTTTTC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAATGGCTAAAATGGAAAGCAGAGATGTATATTATACAATAGTTTTC  497

seq1  TACTTAAAGTCCTTAGTGAAGCTTGGTATGGTGCCACACGCCTATACTTC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAAGTCCTTAGTGAAGCTTGGTATGGTGCCACACGCCTATACTTC  547

seq1  CTGCAAATTTAGGAGGGGAGGCCAAGGCTGCAATAATTCAACAAGTTTGA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAATTTAGGAGGGGAGGCCAAGGCTGCAATAATTCAACAAGTTTGA  597

seq1  GGAGTGTCTGGTCCAAAATAGGGATAGTAGGATAGCTGAGAATAAATTTA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGTCTGGTCCAAAATAGGGATAGTAGGATAGCTGAGAATAAATTTA  647

seq1  GCAAGACTGGACATTACTGAACAAAACAATATATTCAATAATTCCTAGTT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGACTGGACATTACTGAACAAAACAATATATTCAATAATTCCTAGTT  697

seq1  TATCTACAGAGTAAAAACAGTTTTGAGCCATTTATTTATCTCTCTAACTT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTACAGAGTAAAAACAGTTTTGAGCCATTTATTTATCTCTCTAACTT  747

seq1  TCTCTACTACTCTCTTAACCTCCTGGCAAATTACCATTTCATCTTGCCAA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACTACTCTCTTAACCTCCTGGCAAATTACCATTTCATCTTGCCAA  797

seq1  GTGTGCCTGGGTTTACTCAGCATTTAAAATATGTAGTTCCTTTGCAAGTT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCTGGGTTTACTCAGCATTTAAAATATGTAGTTCCTTTGCAAGTT  847

seq1  CCCTTATCTTCTGTTGTTCATAACTCAAAGGATCTTCCAGCATTTTCTCC  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATCTTCTGTTGTTCATAACTCAAAGGATCTTCCAGCATTTTCTCC  897

seq1  CATTATTAACTTAGTTTGAATGCCCAAATATAGTTTCCTTCACAAGCTTT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTAACTTAGTTTGAATGCCCAAATATAGTTTCCTTCACAAGCTTT  947

seq1  TCCTGAAAACCCTAAGATTATGTGTAAGCTGCCCTCTGCCATTAATTTTT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAAACCCTAAGATTATGTGTAAGCTGCCCTCTGCCATTAATTTTT  997

seq1  GAATTC  995
      ||||||
seq2  GAATTC  1003