BAC Information

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BAC

Clone NameB6Ng01-094M09
Chromosome16 (Build37)
Map Location 59,770,242 - 59,770,695
singlet/doubletsinglet
Overlap geneEpha6
Upstream geneOlfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6
Downstream geneLOC100043804, EG668168, LOC668170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094M09.bB6Ng01-094M09.g
ACCDH905902DH905903
length1,276522
definitionDH905902|Mus musculus domesticus DNA, BAC clone: B6Ng01-094M09, 5' end.DH905903|Mus musculus domesticus DNA, BAC clone: B6Ng01-094M09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagtattaatttttttgcttcaactttatcataaaattgacat
atgcagacattttctttactatgataaaatttaacactatctcatccatg
ttcgcttgagttgcctaccttttttactgtcttctgatatacaatatata
ttcagcttctctataagaattggaagaaatattgcatcccagtcactaat
cacctttttaagatgaaaagactagagaggccaagtttggctaagccaac
ttttgtcattgagtccaggaagttacaaataactcttcctttctcatagt
ttggctgagaactttatatttatcaaattaaatactatacaaaaatacaa
tgttcttgtcgagcgcgcccccaactcgccagcaagaacgacgctgctac
aggatccttctgcacacgtttattcagtcctatttcttctttctctatat
ctcccttgtttatatctcccctgtttatatctcccttgtttatatctccc
ttgtttatatctcccttgtttttatatctcccttgtttttatatctccca
ataataacaatcctctctcgaataataatcctccctctaacctgggcctc
tcactcttatatactctcagttcccatccacgcacagcaggccacgccac
ctcaccaggcacgcagcttcagctaatcagggcagcaggggcatatctcc
atcaaatttggattcacctgtatcctggtacacctgtgcagcactcaaga
tgtttgtggtttatatgaggaagtcaggtgcaagtcatatgacttagctg
cagtctctggcgcctttgggactgccgccacacccgctccccacaattcc
cccttttttcttttttggcagagagaatgtctgtagatagccccccgcaa
ccatgccccttacctgtctttgggagacaaacagcattggtttgatccct
gtcttaggtggtgacatgcccaggagtcttatcactgactacctctctat
catgccaagccacacctgggggagcttgtgttttgccttgcggcaggtgc
aatcaaaggccaggatgttattaacttatgcccagattcttattgcttgc
cagcaagccctcatggggtgaaggtagaggtcctgatccaatgtgcaaag
ccatgtggggcactacactaaaccatcccttagctcatacacagaagtct
ctggccagttccggtcttcatgggaaggaactaggactgatactctgcca
tacagacaatacttctcacagagatg
caggttgattagatattttgtgtccatgagaagccgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtttgtaggtatgtgccatggacctgcctac
aattcagtgtttctcaatgggaatatgaaggaggtcctgactggttaaga
ctccatccaccctgggaggcttttgagatcccacacagtgaatctagaac
ttgtgtgctctgctgcctatctgtaaactgtgaagcctattcttctgata
tgtgtgcatgcatgccttatattgctgactcatgacaattaggtagtcaa
tgcatggtagacttgtccattagttcatgattcatagggtataagtcatg
tgtgtactttcatttttggaggctgacacagtacaagcatggctattttc
tacagagtgggagtattttctcataagaagtaatctgaacccactccaca
actgatccattaaataacaatataccaaagtggaagctccataattaatg
gtagtgggtacacattataaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_59770242_59770695
seq2: B6Ng01-094M09.g_144_597

seq1  TGTTTGGAGGTATGTGCCATGGACCTGCCTACAATTCAGTGTTTCTCAAT  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTAGGTATGTGCCATGGACCTGCCTACAATTCAGTGTTTCTCAAT  50

seq1  GGCAATATGAAGGAGGTCCTGACTGGTTAAGACTCCATCCACCCTGGGAG  100
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATATGAAGGAGGTCCTGACTGGTTAAGACTCCATCCACCCTGGGAG  100

seq1  GCTTTTGAGATCCCACACAGTGAATCTAGAACTTGTGTGCTCTGCTGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGAGATCCCACACAGTGAATCTAGAACTTGTGTGCTCTGCTGCCT  150

seq1  ATCTGTAAACTGTGAAGCCGATTCTTCTGATATGTGTGCATGCATGCCTT  200
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATCTGTAAACTGTGAAGCCTATTCTTCTGATATGTGTGCATGCATGCCTT  200

seq1  ATATTGCTGACTCATGACAATTAGGTAGTCAATGCATGGTAGACTTGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCTGACTCATGACAATTAGGTAGTCAATGCATGGTAGACTTGTCC  250

seq1  ATTAGTTCAGGATTCATAGGGTATAAGTCATGTGTGTACTTTCATTTTTG  300
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTCATGATTCATAGGGTATAAGTCATGTGTGTACTTTCATTTTTG  300

seq1  GAGGCTGACACAGTACAAGCATGGCTATTTTCTACAGAGTGGGAGTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGACACAGTACAAGCATGGCTATTTTCTACAGAGTGGGAGTATTT  350

seq1  TCTCATAAGAAGTAATCTGAACCCACTCCACAACTGATCCATTAAAGAAC  400
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTCATAAGAAGTAATCTGAACCCACTCCACAACTGATCCATTAAATAAC  400

seq1  AACATACCAATGTGGAAGCTCCATAATTAATGGTATTGGGTACACATTAA  450
      || ||||||| |||||||||||||||||||||||| ||||||||||||| 
seq2  AATATACCAAAGTGGAAGCTCCATAATTAATGGTAGTGGGTACACATTAT  450

seq1  AAGA  454
      ||||
seq2  AAGA  454