BAC Information

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BAC

Clone NameB6Ng01-094O21
Chromosome16 (Build37)
Map Location 25,368,366 - 25,369,260
singlet/doubletsinglet
Overlap gene5430420C16Rik
Upstream geneLOC666580, LOC100043564, 1110054M08Rik, Lpp, A730098P11Rik
Downstream geneTrp63, LOC100043571, Leprel1, Cldn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094O21.bB6Ng01-094O21.g
ACCDH906011DH906012
length1,186886
definitionDH906011|Mus musculus domesticus DNA, BAC clone: B6Ng01-094O21, 5' end.DH906012|Mus musculus domesticus DNA, BAC clone: B6Ng01-094O21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctccgcatttttggaagataggtgggaaacagggagaaggagtg
accggctcttgtagtacaaggccaattggcttttttatttgggtgggagg
cagtgaaaggcttgccctttcaatagtacgtctccaatctctctcccccc
tattaattaagttaaataaggcaacgcttaactgaggtgatcaaatgatt
ttctcatccgtagatgagtgggcttttaaccttggcttgggtggacatgg
acccgattcctcccgtgggtaaaacccacacatgtggctctcggtacctt
ttggggaggcgaggtagagccggagaatattttttatttttaaccaaaat
ttggtaccaacctctttcaaaccgggtttatctcacaggaaactcagaaa
tggtcaagccggaccttcccttgcagtaagtatctctgcaccaagcggtg
cccatactgaatttgtacaatcacaaaccagtatgcacagttctgagtgc
tgtgcagctcctaaaggagaattatcaacctcagaattagcaaagcctaa
gcaagaattatgtcgttaataacaccacgatttgtgggtaaaataggagc
tggaagtcgttcctcctcatccctgttttttccacagcctattgagctaa
ggacaccttgcagtaacagcaagggtgaaaagccagaggtcagctaaggg
gctaagcctgtctatcaaaataaaaaccaatctttattaatatagaaaaa
tctactcttctagccctctaggtaaacctaaatttttaactcagactgaa
agccacatgctggaaatgtcctgagactgggggtaacagctgccacctgt
gtgctctaggggggcggggatgcacatccactggtccgcctcgggaatgt
tgatttacctgcttgaaagacaaatcttgaaagacagtgagaaagtagaa
agcagacttctttccgggaagtctaggtactttattcaaatgcaatgtaa
agctgaggctagtctcggctcctgtcgggagctggttcaaagagtgctgg
agaacacttgagagcttgtgctctcagctgattaggcactaggaaagtta
gtcctgaagaatcttaactgaagagatcgaattggtcactgagcaattat
ctctaggcaagcacgggactcacttacatctatgta
gaattctttctaatcgcatttcccccttggctttagaggtggtttgtggt
ctttgctttaggaggtttttttttttttttttttttggacttattaataa
tctttcctccctgtggcagcattttgaaaatcaaacagagctctataaat
gtagttctttttaactaatatttaaattcagtttggtgaggccgtcttgg
gatgaggccatagtgtgtgcattggcatattgagtacctcagaacaagaa
gacagtccctgcatcaacgatgtttaacttgcagggaggcagattggtac
acactgtgcacatgcttctaagcgggctctggtctaggttccagtattga
gccaacatgtcatggtcaaggggaacgaaagagaatttgttgtggatgga
atgaagaaagcctcaggagggagtaaaatggacaggttcctgtagagtca
cctgtagacagcagtcacaggagtggtgaataggtgatatttggctattg
tgatgtgccaagtctcccatgtcttagggctcagctgttttaaaggtttg
ttagaaatttctgaatgatcttagatgataggatgaagaattgggagttt
agtcatatcctggcatggtgttgagagttctgggtgggaggatcctaaaa
ccattatattttcccttgaaacgatagtagtaacaatatggggatgtggt
ttggttgaaaatattaaatcagagaaagtggctagctaggaaggtaacct
ccttaatagtagggttgaaaaatcacaagggttttgatctggctggtgga
tgggacaaagagaattcagaatgggaggcaaggcactggacgacctgcat
gaggtgagagactggatttttgtttggggtaagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_25368366_25369260
seq2: B6Ng01-094O21.g_68_953

seq1  GAATTCTTTCTAATCGCATTTCCCCCTTGGCTTTAGAGGTGGTTTGTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTAATCGCATTTCCCCCTTGGCTTTAGAGGTGGTTTGTGGT  50

seq1  CTTTGCTTTAGGAGGTTTTTTTTTTTTTTTTTTTTTGGACTTATTAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTTTAGGAGGTTTTTTTTTTTTTTTTTTTTTGGACTTATTAATAA  100

seq1  TCTTTCCTCCCTGTGGCAGCATTTTGAAAATCAAACAGAGCTCTATAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTCCCTGTGGCAGCATTTTGAAAATCAAACAGAGCTCTATAAAT  150

seq1  GTAGTTCTTTTTAACTAATATTTAAATTCAGTTTGGTGAGGCCGTCTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCTTTTTAACTAATATTTAAATTCAGTTTGGTGAGGCCGTCTTGG  200

seq1  GATGAGGCCATAGTGTGTGCATTGGCATATTGAGTACCTCAGAACAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGCCATAGTGTGTGCATTGGCATATTGAGTACCTCAGAACAAGAA  250

seq1  GACAGTCCCTGCATCAACGATGTTTAACTTGCAGGGAGGCAGATTGGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTCCCTGCATCAACGATGTTTAACTTGCAGGGAGGCAGATTGGTAC  300

seq1  ACACTGTGCACATGCTTCTAAGCGGGCTCTGGTCTAGGTTCCAGTATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTGCACATGCTTCTAAGCGGGCTCTGGTCTAGGTTCCAGTATTGA  350

seq1  GCCAACATGTCATGGTCAAGGGGAACGAAAGAGAATTTGTTGTGGATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACATGTCATGGTCAAGGGGAACGAAAGAGAATTTGTTGTGGATGGA  400

seq1  ATGAAGAAAGCCTCAGGAGGGAGTAAAATGGACAGGTTCCTGTAGAGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAAAGCCTCAGGAGGGAGTAAAATGGACAGGTTCCTGTAGAGTCA  450

seq1  CCTGTAGACAGCAGTCACAGGAGTGGTGAATAGGTGATATTTGGCTATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAGACAGCAGTCACAGGAGTGGTGAATAGGTGATATTTGGCTATTG  500

seq1  TGATGTGCCAAGTCTCCCATGTCTTAGGGCTCAGCTGTTTTAAAGGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGCCAAGTCTCCCATGTCTTAGGGCTCAGCTGTTTTAAAGGTTTG  550

seq1  TTAGAAATTTCTGAATGATCTTAGATGATAGGATGAAGAATTGGGAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATTTCTGAATGATCTTAGATGATAGGATGAAGAATTGGGAGTTT  600

seq1  AGTCATATCCTGGCATGGTGTTGAGAGTTCTGGGTGGGAGGATCCTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATATCCTGGCATGGTGTTGAGAGTTCTGGGTGGGAGGATCCTAAAA  650

seq1  CCATTATATTTTCCCTTGAAACGATAGTAGTAACAATAT-GGGATGTGGT  699
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCATTATATTTTCCCTTGAAACGATAGTAGTAACAATATGGGGATGTGGT  700

seq1  TTGGTTGAAAATATTAAATCAGAGAAAGTGGCTAGCTAGG-AGGTAACCT  748
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTGGTTGAAAATATTAAATCAGAGAAAGTGGCTAGCTAGGAAGGTAACCT  750

seq1  CCTTAATAGTAGGGTTGAAAAATCACAAGGGTTTTGATCTGGGCTGGTGG  798
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCTTAATAGTAGGGTTGAAAAATCACAAGGGTTTTGATCT-GGCTGGTGG  799

seq1  AT-GGACAAAAGGAGAATTCAAGAATGGGAAGGCAAGGCCAAACTGGACG  847
      || |||||||  |||||||| |||||||| |||||||||   ||||||||
seq2  ATGGGACAAA--GAGAATTC-AGAATGGG-AGGCAAGGC---ACTGGACG  842

seq1  ACCTGGCATGAGGTGAGGAGACTGGATTTTTGTTTTGTGGGTAAGGGG  895
      |||| ||||||||||| ||||||||||||||||||   ||||||||||
seq2  ACCT-GCATGAGGTGA-GAGACTGGATTTTTGTTT--GGGGTAAGGGG  886