BAC Information

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BAC

Clone NameB6Ng01-095B06
Chromosome13 (Build37)16 (Build37)
Map Location 73,895,754 - 73,896,55070,783,161 - 70,783,961
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC621486, Irx4, LOC100042864, Ndufs6, Mrpl36, Aytl2, Slc6a3, Clptm1l, Tert, Slc6a18, Slc6a19
Downstream geneSlc12a7, Nkd2, EG666360, Trip13, Brd9, Zdhhc11, LOC100042909, 2900041A09Rik, LOC621824, Cep72, Slc9a3, Exoc3, Ahrr, Pdcd6, Sdha, Ccdc127, AI595366, Zfp72, LOC666670, LOC634386, LOC100042547, LOC666683, LOC547136, BC012278, LOC434490, Arts1, Cast
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095B06.bB6Ng01-095B06.g
ACCDH906113DH906114
length8021,148
definitionDH906113|Mus musculus domesticus DNA, BAC clone: B6Ng01-095B06, 5' end.DH906114|Mus musculus domesticus DNA, BAC clone: B6Ng01-095B06, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(73,895,754 - 73,896,550)(70,783,161 - 70,783,961)
sequence
gaattcagcttctagaaattcatcccttggggccaggcacctttgtaatg
gactgggggccagataagtttttcttttcttttcttttcttttcttttct
tttcttttcttttctttttctttttctttttctttttctttttctttctt
tctttttttaattctttgtcagctttgttatttaacaaacatttgctggc
ttgcctctttcttttgatatgtcagaaataaccctgttatctccttgtca
agtaagtctggaacttgcagactagcaagcagtcgctttttgtgcttggg
catggtgcagggccctggattaggtggttctgaaatctgttagaacaaaa
agcacagacttgggcgttgaggttagaaactggaagaatagttcttttct
tatttatttattttatgtgtatgagtacactgtagctgtacagatggttg
tgagcctttatctggctgttgggaattgaatttaggacctctgctcgctc
cagccaaccccacttgctctggcccaaagatttatttattattatgaata
agtacactatagctgtcttcagacactccagaagagggcatcagatctca
ttatgggtggttatgagccaccaagtggtttctgggtctgagttcaaact
caggaccttcggaagagcaagtcagtgctcttacccgctgagccatctca
ccccgcccagttctatacttttttaaaggttgactcgacttccattttct
tccggagggcagctcaagcagagcgaggtcccactttctacaggttgaat
tc
gaattcagaactcttcagctggggaaaggtactgatgaagagaaagaaga
gagatgaagactgaataaactgctgttagaaggactggtggtcgcgtcgt
tcttgctggttgagagtgggcgcgacaattggtggcccgtatggggaacc
gactcccccaccgagttcagaactttcagcagtcagtggttgccggcagg
gtaagttcatggtgagtgaaacttgcaaccccaggagtttgggaaggacc
tcggataaaatagaggtgagcataaagttgccaggaagtaggcacaaagt
aacccaggagtttgggaaggacctcagataaaatagaggcaagcataaag
ttgccaggaagcaggcacaaggtaacgaaaggttcccggctttgggacaa
gtttaggttcaaggctttgggaaaagttaaggttcccggtttggggacaa
gttaaggaactatgataacctcagtgtagtgatcaatagatcctcgctga
gtagttatgcttttttctcccattgaccctttgtgggtaggtctgatagt
tttggtcttgtttgttctgatatatggactctgttactgtttgaaactgt
gtgtagaggcagtcaagacaggtcagaaaatccttatagagcaacaagaa
agtatgtcggaagaggagaagggcttaaaaagaaaaaggaaaaagaaagg
agacacagtgttatcaggtggacagaaaggacaaaataaaagagctgagg
cagaggaggaaggcgaattagcttttgctccccctccctatgcctcctcg
gcagccatctatgggcagaccttctgtccggaggtctggaaagaggatag
attctccttgctgggatgtctattttcactgatcaagctgatttgcatgg
gatagagaaatgctgctgatcaagtagatttgcaacaacaacaaacagga
tatcactgcagttgtttgagcagtgaatcagattgctataacgcatagaa
atcattgcccacagagggaagctagtgaactgactctcatatgactccca
atggtcacacagtgatgagtaatggtcctatacacgagattggtccatct
cccttgggaatgacagatcaggttgaccggcagtaggtctgtttgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_73895754_73896550
seq2: B6Ng01-095B06.b_44_845

seq1  GAATTCAGCTTCTAGAAATTCATCCCTTGGGGCCAGGCACCTTTGTAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTTCTAGAAATTCATCCCTTGGGGCCAGGCACCTTTGTAATG  50

seq1  GACTGGGGGCCAGATAAGTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGGGCCAGATAAGTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCT  100

seq1  TTTCTTTTCTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTCTT  150

seq1  TCTTTTTTTAATTCTTTGTCAGCTTTGTTATTTAACAAACATTTGCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTAATTCTTTGTCAGCTTTGTTATTTAACAAACATTTGCTGGC  200

seq1  TTGCCTCTTTCTTTTGATATGTCAGAAATAACCCTGTTATCTCCTTGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTTTCTTTTGATATGTCAGAAATAACCCTGTTATCTCCTTGTCA  250

seq1  AGTAAGTCTGGAACTTGCAGACTAGCAAGCAGTCGCTTTTTGTGCTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTCTGGAACTTGCAGACTAGCAAGCAGTCGCTTTTTGTGCTTGGG  300

seq1  CATGGTGCAGGGCCCTGGATTAGGTGGTTCTGAAATCTGTTAGAACAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGCAGGGCCCTGGATTAGGTGGTTCTGAAATCTGTTAGAACAAAA  350

seq1  AGCACAGACTTGGGCGTTGAGGTTAGAAACTGGAAGAATAGTTCTTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGACTTGGGCGTTGAGGTTAGAAACTGGAAGAATAGTTCTTTTCT  400

seq1  TATTTATTTATTTTATGTGTATGAGTACACTGTAGCTGTACAGATGGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTTTATGTGTATGAGTACACTGTAGCTGTACAGATGGTTG  450

seq1  TGAGCCTTTATCTGGCTGTTGGGAATTGAATTTAGGACCTCTGCTCGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTTTATCTGGCTGTTGGGAATTGAATTTAGGACCTCTGCTCGCTC  500

seq1  CAGCCAACCCCACTTGCTCTGGCCCAAAGATTTATTTATTATTATGAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAACCCCACTTGCTCTGGCCCAAAGATTTATTTATTATTATGAATA  550

seq1  AGTACACTATAGCTGTCTTCAGACACTCCAGAAGAGGGCATCAGATCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACTATAGCTGTCTTCAGACACTCCAGAAGAGGGCATCAGATCTCA  600

seq1  TTATGGGTGGTTATGAGCCACCAAGTGGTTTCTGGGTCTGAGTTCAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGTGGTTATGAGCCACCAAGTGGTTTCTGGGTCTGAGTTCAAACT  650

seq1  CAGGACCTTCGGAAGAGC-AGTCAGTGCTCTTACCCGCTGAGCCATCTCA  699
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CAGGACCTTCGGAAGAGCAAGTCAGTGCTCTTACCCGCTGAGCCATCTCA  700

seq1  -CCCGCCCAGTTCTATAC-TTTTTAAAGGCTGACTCGACTTCCATTTTCT  747
       ||||||||||||||||| |||||||||| ||||||||||||||||||||
seq2  CCCCGCCCAGTTCTATACTTTTTTAAAGGTTGACTCGACTTCCATTTTCT  750

seq1  TCCTGAGGGCAGCTCAAGCAGAGCGAGG-CCCAC-TTCTACAGTCTGAAT  795
      ||| |||||||||||||||||||||||| ||||| ||||||||  |||||
seq2  TCCGGAGGGCAGCTCAAGCAGAGCGAGGTCCCACTTTCTACAGGTTGAAT  800

seq1  TC  797
      ||
seq2  TC  802

seq1: chr16_70783161_70783961
seq2: B6Ng01-095B06.g_418_1214

seq1  TGCCAGGAAGCAGGCACAAGGTAACGAAAGGTTCCTGGCTTTGGGAC---  47
      ||||||||||||||||||||||||||||||||||| |||||||||||   
seq2  TGCCAGGAAGCAGGCACAAGGTAACGAAAGGTTCCCGGCTTTGGGACAAG  50

seq1  ----------------------AAGTTAAGGTTCCCGGTTTGGGGACAAG  75
                            ||||||||||||||||||||||||||||
seq2  TTTAGGTTCAAGGCTTTGGGAAAAGTTAAGGTTCCCGGTTTGGGGACAAG  100

seq1  TTAAGGAACTATGATAACCTCAGTGTAGTGATCAAGAGATCCTCGCTGAG  125
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTAAGGAACTATGATAACCTCAGTGTAGTGATCAATAGATCCTCGCTGAG  150

seq1  TAGTTATGCTTTTTTCTCCCGTTGACCCTTTGTGGGTAGGTCTGATAGTT  175
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TAGTTATGCTTTTTTCTCCCATTGACCCTTTGTGGGTAGGTCTGATAGTT  200

seq1  TTGGTCTTGCTTGTTCTGATATATGGACTCTGTTACTGTTTGAAACTGTG  225
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTTGTTTGTTCTGATATATGGACTCTGTTACTGTTTGAAACTGTG  250

seq1  TGTAGAGGCAGTCAAGACAGGTCAGAAAATCCTTATAGAGCAACAAGAAA  275
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGGCAGTCAAGACAGGTCAGAAAATCCTTATAGAGCAACAAGAAA  300

seq1  GTATGTCGGAAGAGGAGAAGGGCTTAAAAAGAAAAAGGAAAAAGAAAGGA  325
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCGGAAGAGGAGAAGGGCTTAAAAAGAAAAAGGAAAAAGAAAGGA  350

seq1  GACACAGTGTTATCAGGTGGACAGAAAGGACAAAATAAAAGAGTTGAGGC  375
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GACACAGTGTTATCAGGTGGACAGAAAGGACAAAATAAAAGAGCTGAGGC  400

seq1  AGAGGAGGAAGGCGAATTAGCTTTTGCTCCCCCTCCCTATGCCTCCTCGT  425
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGAGGAGGAAGGCGAATTAGCTTTTGCTCCCCCTCCCTATGCCTCCTCGG  450

seq1  CAGCCATCTATGGGCAGACCTTCTGTCCGGAGGTCTGGAAAGAGGATAGA  475
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATCTATGGGCAGACCTTCTGTCCGGAGGTCTGGAAAGAGGATAGA  500

seq1  TTCTCCTTGCTGGGATGTCCTATTTTCACTGATCAAGCTAAATTTGCATG  525
      |||||||||||||||||| ||||||||||||||||||||  |||||||||
seq2  TTCTCCTTGCTGGGATGT-CTATTTTCACTGATCAAGCT-GATTTGCATG  548

seq1  GGATAGAGATATGCTGCTTGATCAAGGTCGATTTGC-ACAACAACAAACA  574
      ||||||||| ||||||| ||||||| || ||||||| |||||||||||||
seq2  GGATAGAGAAATGCTGC-TGATCAA-GTAGATTTGCAACAACAACAAACA  596

seq1  GGATATCCACTGCAGGTGTTTGAGCAGGTGAATCAGATTGCCATAAGGGC  624
      |||||| |||||||| |||||||||| |||||||||||||| ||||  ||
seq2  GGATAT-CACTGCAGTTGTTTGAGCA-GTGAATCAGATTGCTATAA-CGC  643

seq1  TTGGAAATCATTGCCCAACAGAGGGGAAGTTAGTGAAAACTTGACTCTCA  674
       | ||||||||||||| ||||| |||||| |||||||    |||||||||
seq2  ATAGAAATCATTGCCC-ACAGA-GGGAAGCTAGTGAA---CTGACTCTCA  688

seq1  TATTGACTCCCCAGATGGACACACAGGTGATTGAGGTTATGGTCTCATCA  724
      || ||||||||   |||| |||||| |||| ||| || ||||||  ||  
seq2  TA-TGACTCCC--AATGGTCACACA-GTGA-TGA-GTAATGGTCCTAT--  730

seq1  CCACGAGGTATTGTGTCCATCTCCCCTGGGGATCGACCAGATCAGGTGTT  774
       ||||||  |||| ||||||||||| |||| || || ||||||||  |||
seq2  ACACGAG--ATTG-GTCCATCTCCCTTGGGAAT-GA-CAGATCAG--GTT  773

seq1  GACGTGGGCGAGAGGGTCTGTTTGTGT  801
      |||   ||| ||  |||||||||||||
seq2  GAC--CGGC-AGTAGGTCTGTTTGTGT  797