BAC Information

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BAC

Clone NameB6Ng01-095C05
Chromosome16 (Build37)
Map Location 32,085,889 - 32,086,755
singlet/doubletsinglet
Overlap genePigx
Upstream geneCentb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2
Downstream gene1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095C05.bB6Ng01-095C05.g
ACCDH906159DH906160
length8661,190
definitionDH906159|Mus musculus domesticus DNA, BAC clone: B6Ng01-095C05, 5' end.DH906160|Mus musculus domesticus DNA, BAC clone: B6Ng01-095C05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtgtcttctcgggggaaaaactgcttcagagttcatttagata
agaaatggtgtcattaaagggaacagaaagcatgactggaaaaagaacgt
gagcagagagaaaagtcttaatgctcacatcagagacaatgtaagattaa
aatcccctctccacttaagttaatagtaacaacactgttggagaccagga
aaagtcaaaatctcaaagagctttttaaactaaagaacaggcctccatgc
tgaggctctatgaagaaataatcaaagaagaggacttttagtttgctgtt
tgacaacaatttcatgtcgcctaaattagccttgtactcactacggaggc
aaagatggtccttcaactcctgatcccagctgcttctacatcctgagttt
ttaaagtatacaaacacctagttttccccccttatatttttgcaaaggga
gacagacccaggcatggtgttgtatacttttaatcccagcactcaagagg
caaaggcaggcagatccctgagttccaggtcagtcaccactacactgaga
aaccctgtctcaaaaacaccaggaagtaaatgattcccattaagaactga
gggctggggatggggaggaggaagggtcagaggttaagagcatttcccac
tctcccagagaacccgaatttggttcccagcaagcatggtgggtagctca
caactgcccttactgcagctcctccagggaattcgacaccaacttctggg
caatctggacactgtactccgagggaggcccccatatccacacacagacg
caaatatcattacaatttaaaacatcttagtataagagaggaagcaagtg
ttagagtgagctcatt
gaattcactgcatagaccaagctggcctcaaactcagaaatctgcctccc
aagtgctggaattaaaggtgtgctccaccactgccttacaaaaatttatg
gtttttttttttttttttttttttttttggaatacccccatagatttgtg
gccatcagtcgcgttaagaacaacgccccaagcccctcacatgcagagga
catgatctgtcgtcacatagtctcaaaacagatttccattttaatgaagt
tcctaaaggcctggagagcttagccaataagcttgcctccccagatactc
ctccctgcaaaaggtatttaacctcaggcccaccctgaaaagtggggtac
agttttacacatacactttctgccatgacaataaatgccttaaaaccatg
gactgcctcttttcatcgagatctgccatagggagccacagagatgccct
ttgccttcagagctgctatttaaactccagtagaaggcctctctgcactc
ccagccaccaagccaagccaagccaagaactccccctgcaggactaacca
gagtccctcttcctcccagccccgagccagatccagtctgtggtgcccag
attccattctcagccatcttttcagccccctggttacaaattttgatatt
atcaacagtactgctacgaagttatatacagctttgcataactatagtta
aatgttttaaaatttttgagtagagttatttaggaggagcattagtaggc
tacacaataagtctatgagaatagcgttttccacagcaggcccatccctc
cattggagcaggagggtgtccatctttctgtatccttacctattcctctc
cctcccatctctcttcttcccatcctcttctctctttatattctaggcat
ctttacaagtgacactgatatggattttgtaatgctttagagtatattta
aatgcctgttttgtatcgaatactttatcccagcactagaagcagagcag
ttgatcttctgtggttcgagcagcctggtctacatagagtggttcagtca
gccagactatatagagaacctgtctcaaaacaataaataggcgttaactt
ctgcataagtgctgctccgcatgacctatatatgaagtaagccttgagtc
gtatgcatctgtgcttgttgaaagacttctgtagactcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32085889_32086755
seq2: B6Ng01-095C05.b_51_916

seq1  GAATTCTGTGTCTTCTCGGGGGAAAAACTGCTTCAGAGTTCATTTAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTCTTCTCGGGGGAAAAACTGCTTCAGAGTTCATTTAGATA  50

seq1  AGAAATGGTGTCATTAAAGGGAACAGAAAGCATGACTGGAAAAAGAACGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGGTGTCATTAAAGGGAACAGAAAGCATGACTGGAAAAAGAACGT  100

seq1  GAGCAGAGAGAAAAGTCTTAATGCTCACATCAGAGACAATGTAAGATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGAGAGAAAAGTCTTAATGCTCACATCAGAGACAATGTAAGATTAA  150

seq1  AATCCCCTCTCCACTTAAGTTAATAGTAACAACACTGTTGGAGACCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCCTCTCCACTTAAGTTAATAGTAACAACACTGTTGGAGACCAGGA  200

seq1  AAAGTCAAAATCTCAAAGAGCTTTTTAAACTAAAGAACAGGCCTCCATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAAAATCTCAAAGAGCTTTTTAAACTAAAGAACAGGCCTCCATGC  250

seq1  TGAGGCTCTATGAAGAAATAATCAAAGAAGAGGACTTTTAGTTTGCTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTCTATGAAGAAATAATCAAAGAAGAGGACTTTTAGTTTGCTGTT  300

seq1  TGACAACAATTTCATGTCGCCTAAATTAGCCTTGTACTCACTACGGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAACAATTTCATGTCGCCTAAATTAGCCTTGTACTCACTACGGAGGC  350

seq1  AAAGATGGTCCTTCAACTCCTGATCCCAGCTGCTTCTACATCCTGAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGGTCCTTCAACTCCTGATCCCAGCTGCTTCTACATCCTGAGTTT  400

seq1  TTAAAGTATACAAACACCTAGTTTTCCCCCCTTATATTTTTGCAAAGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTATACAAACACCTAGTTTTCCCCCCTTATATTTTTGCAAAGGGA  450

seq1  GACAGACCCAGGCATGGTGTTGTATACTTTTAATCCCAGCACTCAAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACCCAGGCATGGTGTTGTATACTTTTAATCCCAGCACTCAAGAGG  500

seq1  CAAAGGCAGGCAGATCCCTGAGTTCCAGGTCAGTCACCACTACACTGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCAGGCAGATCCCTGAGTTCCAGGTCAGTCACCACTACACTGAGA  550

seq1  AACCCTGTCTCAAAAACACCAGGAAGTAAATGATTCCCATTAAGAACTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGTCTCAAAAACACCAGGAAGTAAATGATTCCCATTAAGAACTGA  600

seq1  GGGCTGGGGATGGGGAGGAGGAAGGGTCAGAGGTTAAGAGCATTTCCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGGGATGGGGAGGAGGAAGGGTCAGAGGTTAAGAGCATTTCCCAC  650

seq1  TCTCCCAGAGAACCCGAATTTGGTTCCCAGCAAGCATGGTGGGTAGCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCAGAGAACCCGAATTTGGTTCCCAGCAAGCATGGTGGGTAGCTCA  700

seq1  CAACTGCCCTTAACTGCAGCTCCTCCAGGGAATTCGACACCAACTTCTGG  750
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCCCTT-ACTGCAGCTCCTCCAGGGAATTCGACACCAACTTCTGG  749

seq1  GCAATCTGGACACTGTACTCCGAGGGAGGCCCCCATATCCACACACAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCTGGACACTGTACTCCGAGGGAGGCCCCCATATCCACACACAGAC  799

seq1  GCAAATATCAATACAATTTAAAACATCTTAGCATAAGAGAGGAAGCAAGT  850
      |||||||||| |||||||||||||||||||| ||||||||||||||||||
seq2  GCAAATATCATTACAATTTAAAACATCTTAGTATAAGAGAGGAAGCAAGT  849

seq1  GTTAGAGTGAGCTCATT  867
      |||||||||||||||||
seq2  GTTAGAGTGAGCTCATT  866