BAC Information

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BAC

Clone NameB6Ng01-095C17
Chromosome16 (Build37)
Map Location 28,892,872 - 28,940,550
singlet/doubletdoublet
Overlap gene1600021P15Rik
Upstream geneFgf12
Downstream geneEG666717, Hrasls, Atp13a5, Atp13a4, Opa1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095C17.bB6Ng01-095C17.g
ACCDH906183DH906184
length823611
definitionDH906183|Mus musculus domesticus DNA, BAC clone: B6Ng01-095C17, 5' end.DH906184|Mus musculus domesticus DNA, BAC clone: B6Ng01-095C17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,939,728 - 28,940,550)(28,892,872 - 28,893,415)
sequence
gaattctttgtgctacagcttcaaaaaaatatccatcctgtatttgggct
tcagaacactaagtaacccttgctcttcattttagggccaagaatttaca
actgttttgcagccttttgtaaattctcccagggttcttcctttagcttc
ctgtcacattttggagagagagttgtctgtcttctgacacacctgctggt
accctgttgggtcctgaggccctgagaccctgtttgcaacctccaggact
gacctgcagagtgaatatcagcagcatatctccctcatcctccccacact
gaattaagaggccattagcaagggcgtgccaagcaaggggggattaatgc
acttgtagattcgccttgctttggtttcaggctacttctttaagagtagg
gtggctatggcaaggagggaagtctaactatggattgtcaagttgtgaga
aggatagactgaggaataaaataaaacacacaaaatgtgtgaaaaatgtg
taaaagaccaacactgctttgtttgtcttcacaggttagaggtacagtct
gagtggcatgccttatgactctttattctgttcatttacacagaggaaag
ggggattgggtgggggggacgttttcctaggatcattacctaatgtgtaa
aactggtctagaatggacacctcctgacttgcagatcgctgccttttgtt
tgaatttattcattcacagcatgtatctcagctcccctgcttacctacct
acctcttaaatatgaagggcagcttcaataaaatgcataaaatcgtgatt
agaattaactggggagggggagt
gaattccaagctagcctgggatacagctgagaccctgttgggaaaagggg
ggggggggtagggataacagctagaaaattcccatcatacacaaaactat
gatgatatttacgatgccggagtaaagagaagagactaaagtacccagcc
taagggagaacactactctatcaaaacatcctgggcgtagcctcactgga
aactctgtttggaccataacatagttcaagttttccttattcctacttct
tctgtctcatagcaaaaaagctgtgggtctgctggggtccctcctaccat
acctcctccgctcccagccagctctcctcctctgtgagcttctgtcccta
gacactggaagctagccccttcagcactgagagggtgccttcccgacaca
ctggaggtgttttagaacacaatagtggctacttttttggctacttaaca
caggcgctaaggccatacgggaagaaagaaacctcaattgagaaaaaccg
cctccatcaaactggcctgcaggcaagcccatggaggattttaccgagaa
atgactgaccttgggagagggtctagcccactgtggataatgcgaccccc
tgggcaggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28939728_28940550
seq2: B6Ng01-095C17.b_45_867 (reverse)

seq1  ACTCCCCCTCCCCAGTCTAATTCTGATCACGATTCTATGCATTTTATTGA  50
      |||||||||||||||| ||||||| ||||||||| |||||||||||||||
seq2  ACTCCCCCTCCCCAGT-TAATTCTAATCACGATTTTATGCATTTTATTGA  49

seq1  AGCTTGCCTTCATATTTTAAGAGGTAGGTAGGTAAGCAGGGGAGCTGAGA  100
      ||||  |||||||| |||||||||||||||||||||||||||||||||||
seq2  AGCTGCCCTTCATA-TTTAAGAGGTAGGTAGGTAAGCAGGGGAGCTGAGA  98

seq1  TACATGCTGTGAATGAATAAATTCAAAC-AAAGGCAGCGATCTGCAAGTC  149
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TACATGCTGTGAATGAATAAATTCAAACAAAAGGCAGCGATCTGCAAGTC  148

seq1  AGGAGGTGTCCATTCTAGACCAGTTTTACACATTAGGTAATGATCCTAGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTGTCCATTCTAGACCAGTTTTACACATTAGGTAATGATCCTAGG  198

seq1  AAAACGT-CCCCCCACCCAATCCCCCTTTCCTCTGTGTAAATGAACAGAA  248
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACGTCCCCCCCACCCAATCCCCCTTTCCTCTGTGTAAATGAACAGAA  248

seq1  TAAAGAGTCATAAGGCATGCCACTCAGACTGTACCTCTAACCTGTGAAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGTCATAAGGCATGCCACTCAGACTGTACCTCTAACCTGTGAAGA  298

seq1  CAAACAAAGCAGTGTTGGTCTTTTACACATTTTTCACACATTTTGTGTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAGCAGTGTTGGTCTTTTACACATTTTTCACACATTTTGTGTGT  348

seq1  TTTATTTTATTCCTCAGTCTATCCTTCTCACAACTTGACAATCCATAGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTATTCCTCAGTCTATCCTTCTCACAACTTGACAATCCATAGTT  398

seq1  AGACTTCCCTCCTTGCCATAGCCACCCTACTCTTAAAGAAGTAGCCTGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCCCTCCTTGCCATAGCCACCCTACTCTTAAAGAAGTAGCCTGAA  448

seq1  ACCAAAGCAAGGCGAATCTACAAGTGCATTAATCCCCCCTTGCTTGGCAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGCAAGGCGAATCTACAAGTGCATTAATCCCCCCTTGCTTGGCAC  498

seq1  GCCCTTGCTAATGGCCTCTTAATTCAGTGTGGGGAGGATGAGGGAGATAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTGCTAATGGCCTCTTAATTCAGTGTGGGGAGGATGAGGGAGATAT  548

seq1  GCTGCTGATATTCACTCTGCAGGTCAGTCCTGGAGGTTGCAAACAGGGTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGATATTCACTCTGCAGGTCAGTCCTGGAGGTTGCAAACAGGGTC  598

seq1  TCAGGGCCTCAGGACCCAACAGGGTACCAGCAGGTGTGTCAGAAGACAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCCTCAGGACCCAACAGGGTACCAGCAGGTGTGTCAGAAGACAGA  648

seq1  CAACTCTCTCTCCAAAATGTGACAGGAAGCTAAAGGAAGAACCCTGGGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCTCTCCAAAATGTGACAGGAAGCTAAAGGAAGAACCCTGGGAG  698

seq1  AATTTACAAAAGGCTGCAAAACAGTTGTAAATTCTTGGCCCTAAAATGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACAAAAGGCTGCAAAACAGTTGTAAATTCTTGGCCCTAAAATGAA  748

seq1  GAGCAAGGGTTACTTAGTGTTCTGAAGCCCAAATACAGGATGGATATTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGGGTTACTTAGTGTTCTGAAGCCCAAATACAGGATGGATATTTT  798

seq1  TTTGAAGCTGTAGCACAAAGAATTC  823
      |||||||||||||||||||||||||
seq2  TTTGAAGCTGTAGCACAAAGAATTC  823

seq1: chr16_28892872_28893415
seq2: B6Ng01-095C17.g_131_676

seq1  AACAGCTAGAAAATTCCCATCATACACAAAACTATGATGATATTTACGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTAGAAAATTCCCATCATACACAAAACTATGATGATATTTACGAT  50

seq1  GCCGGAGTAAAGAGAAGAGACTAAAGTACCCAGCCTAAGGGAGAACACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGAGTAAAGAGAAGAGACTAAAGTACCCAGCCTAAGGGAGAACACTA  100

seq1  CTCTATCAAAACATCCTGGGCGTAGCCTCACTGGAAACTCTGTTTGGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCAAAACATCCTGGGCGTAGCCTCACTGGAAACTCTGTTTGGACC  150

seq1  ATAACATAGTTCAAGTTTTCCTTATTCCTACTTCTTCTGTCTCAGAGCAA  200
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATAACATAGTTCAAGTTTTCCTTATTCCTACTTCTTCTGTCTCATAGCAA  200

seq1  AAAAGCTGTGGGTCTGCTGGGGTCCCTCCTACCATACCTCCTCCGCTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTGTGGGTCTGCTGGGGTCCCTCCTACCATACCTCCTCCGCTCCC  250

seq1  AGCCAGCTCTCCTCCTCTGTGAGCTTCTGTCCCTAGACACTGGAAGCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCTCTCCTCCTCTGTGAGCTTCTGTCCCTAGACACTGGAAGCTAG  300

seq1  CCCCTTCAGCACTGAGAGGGTGCCTTCCCGACACACTGGAGGTGTTTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCAGCACTGAGAGGGTGCCTTCCCGACACACTGGAGGTGTTTTAG  350

seq1  AACACAATAGTGGCTACTTTTTTGGCAACTTAACACAGGCGCTAAGGCCA  400
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AACACAATAGTGGCTACTTTTTTGGCTACTTAACACAGGCGCTAAGGCCA  400

seq1  TACGGGAAG-AAGAAACCTCAATTGAGAAAAACCGCCTCCATCAAACTGG  449
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TACGGGAAGAAAGAAACCTCAATTGAGAAAAACCGCCTCCATCAAACTGG  450

seq1  CCTGCAGGCAAGCCCATGGAGGATTTTACCGAGAAATGACTGACCTTGGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGGCAAGCCCATGGAGGATTTTACCGAGAAATGACTGACCTTGGG  500

seq1  AGAGGGTCTAGCCCACTGTGGATAATGCGA-CCCCTGGGCAGGTTG  544
      |||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGAGGGTCTAGCCCACTGTGGATAATGCGACCCCCTGGGCAGGTTG  546