BAC Information

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BAC

Clone NameB6Ng01-096B19
Chromosome16 (Build37)
Map Location 27,780,584 - 27,926,425
singlet/doubletdoublet
Overlap genenone
Upstream geneGm606, Ostn, Uts2d, Ccdc50
Downstream geneFgf12, 1600021P15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096B19.bB6Ng01-096B19.g
ACCDH906864DH906865
length989768
definitionDH906864|Mus musculus domesticus DNA, BAC clone: B6Ng01-096B19, 5' end.DH906865|Mus musculus domesticus DNA, BAC clone: B6Ng01-096B19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,925,442 - 27,926,425)(27,780,584 - 27,781,385)
sequence
gaattcaaatgcatttagttttgagccatctggtgatacacaaaacaatg
catatatttatctgggaggagcgagtgtacaccaagccatgcatatttat
ctgagaggggtaggtatatgccaaaccatgtgcatttttatttgagtcat
atttctggaagtagtagacagattacgttattatgggaacctctaaacag
tgtagtattttatcaggattttatttttgaggtcctataaaaatagactt
atcacagcagcctctagtaacatgaatggtgaaggacaaaaggaagccaa
gaaacatctctgttaaaaaacagatttttttttttttaggccctcagtag
accatatgtcactgcttaatctacagctctcaaaatgttcatgggcaagg
tataaataaacaaggctatgccttccaaccagaagattttagctgaagca
aaacattcagtgtgggtctccagatttgatcctcggttataggcttcacg
tagtggctggaaagtctcctcagtatcacaccagactctggaaatcttta
acatcttgttttggggaagggagtggaggttctgcatttctcagctcttc
ccggtgctatgttgatttgcagagcatctttgccgaggcatgtgtgaaca
ttttaacagggcacagcccttctccctgtctgtttgtttcttctgtttct
caggctgctgcaggaagggaagcacagaagtgttaagacttgacttagag
gtgacagacaaagcactggctttcactatttccctggacatgtgataaca
tagagaacgtgttgctggtggggcgaagaggtcaacgtgcttttcgagga
acatgcagcttgtgacagagagaatttctagattccacaataagattaaa
gaataatggagtatttattaccctttattatattcataagcatcttgtgg
ctcagaattacactcataaatttaaataccctttaaatt
gaattcaggaaaaaatagtttgctttaaaaggacaatttgacattttatt
gcctttacaatttattttcctgatatcttaaggctgtaaagtatattaga
tatgagatataggatatgagaaataatctatctatctatctctatctcta
tctctatctctatctctatctctatctctatctctatctctatctctatc
tctatctatatctatatctatggagagagagagagagattgcagttatct
cacagtaagttatctactgacaatgatttttatataggaaagttatggaa
ggaagtcaaagacactttttcatttggtgattatatttaatacgtacagc
tctctcaggtcctggaaaaagatattcctgttttgtaaatggcaacaggc
tttccaaacagatttatcatcagacacaaaaagaatttataatttcaagc
attttaaagtgaatgttctaagaaaagataagtaagaggctggagttggg
aagaaccaagtggctgaagaagaagaccatcttgcttgataagtatatgt
gatcattctatatctggctgtatcctatgagctagaatactctataaact
ctcactagttctgaatctaatgtgatctagagtgagacagaagtgaccgg
aagctatggatatggaattgtcatacatgacactcttcctagcattcagt
gattctcatctggagactaagcacaccatatgtacaagctctgtggtcgc
tagagtcagcatcagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_27925442_27926425
seq2: B6Ng01-096B19.b_43_1031 (reverse)

seq1  AATTTAAA-GGTATTTTAATTTATGAGTGT-ATTCTGAG-CACCAGATGC  47
      |||||||| ||||||| ||||||||||||| |||||||| ||| ||||||
seq2  AATTTAAAGGGTATTTAAATTTATGAGTGTAATTCTGAGCCACAAGATGC  50

seq1  TTATGAATATAATTAAGGGTAATAAATACCTCCATTATTC-TTAATCTTA  96
      ||||||||||||| |||||||||||||| ||||||||||| |||||||||
seq2  TTATGAATATAATAAAGGGTAATAAATA-CTCCATTATTCTTTAATCTTA  99

seq1  TTGTGGAATCTAGAAATTCTCTCTGTCAC-AGCTGCATGTT-CTCCGAAA  144
      ||||||||||||||||||||||||||||| ||||||||||| |||  |||
seq2  TTGTGGAATCTAGAAATTCTCTCTGTCACAAGCTGCATGTTCCTCGAAAA  149

seq1  GCACGTTGACCTCTTCGCCCCACCAGCAACACGTTCTCTATGTTATCACA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTTGACCTCTTCGCCCCACCAGCAACACGTTCTCTATGTTATCACA  199

seq1  TGTCCAGGGAAATAGTGAAAGCCAGTGCTTTGTCTGTCACCTCTAAGTCA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGGGAAATAGTGAAAGCCAGTGCTTTGTCTGTCACCTCTAAGTCA  249

seq1  AGTCTTAACACTTCTGTGCTTCCCTTCCTGCAGCAGCCTGAGAAACAGAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTAACACTTCTGTGCTTCCCTTCCTGCAGCAGCCTGAGAAACAGAA  299

seq1  GAAACAAACAGACAGGGAGAAGGGCTGTGCCCTGTTAAAATGTTCACACA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAACAGACAGGGAGAAGGGCTGTGCCCTGTTAAAATGTTCACACA  349

seq1  TGCCTCGGCAAAGATGCTCTGCAAATCAACATAGCACCGGGAAGAGCTGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCGGCAAAGATGCTCTGCAAATCAACATAGCACCGGGAAGAGCTGA  399

seq1  GAAATGCAGAACCTCCACTCCCTTCCCCAAAACAAGATGTTAAAGATTTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCAGAACCTCCACTCCCTTCCCCAAAACAAGATGTTAAAGATTTC  449

seq1  CAGAGTCTGGTGTGATACTGAGGAGACTTTCCAGCCACTACGTGAAGCCT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCTGGTGTGATACTGAGGAGACTTTCCAGCCACTACGTGAAGCCT  499

seq1  ATAACCGAGGATCAAATCTGGAGACCCACACTGAATGTTTTGCTTCAGCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCGAGGATCAAATCTGGAGACCCACACTGAATGTTTTGCTTCAGCT  549

seq1  AAAATCTTCTGGTTGGAAGGCATAGCCTTGTTTATTTATACCTTGCCCAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTCTGGTTGGAAGGCATAGCCTTGTTTATTTATACCTTGCCCAT  599

seq1  GAACATTTTGAGAGCTGTAGATTAAGCAGTGACATATGGTCTACTGAGGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTTGAGAGCTGTAGATTAAGCAGTGACATATGGTCTACTGAGGG  649

seq1  CCTAAAAAAAAAAAAATCTGTTTTTTAACAGAGATGTTTCTTGGCTTCCT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAAAAAAAAAAATCTGTTTTTTAACAGAGATGTTTCTTGGCTTCCT  699

seq1  TTTGTCCTTCACCATTCATGTTACTAGAGGCTGCTGTGATAAGTCTATTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCTTCACCATTCATGTTACTAGAGGCTGCTGTGATAAGTCTATTT  749

seq1  TTATAGGACCTCAAAAATAAAATCCTGATAAAATACTACACTGTTTAGAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGACCTCAAAAATAAAATCCTGATAAAATACTACACTGTTTAGAG  799

seq1  GTTCCCATAATAACGTAATCTGTCTACTACTTCCAGAAATATGACTCAAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCATAATAACGTAATCTGTCTACTACTTCCAGAAATATGACTCAAA  849

seq1  TAAAAATGCACATGGTTTGGCATATACCTACCCCTCTCAGATAAATATGC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGCACATGGTTTGGCATATACCTACCCCTCTCAGATAAATATGC  899

seq1  ATGGCTTGGTGTACACTCGCTCCTCCCAGATAAATATATGCATTGTTTTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTGGTGTACACTCGCTCCTCCCAGATAAATATATGCATTGTTTTG  949

seq1  TGTATCACCAGATGGCTCAAAACTAAATGCATTTGAATTC  984
      ||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCACCAGATGGCTCAAAACTAAATGCATTTGAATTC  989

seq1: chr16_27780584_27781385
seq2: B6Ng01-096B19.g_69_836

seq1  GAATTCAGGAAAAAATAGTTTGCTTTAAAAGGACAATTTGACATTTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAAAAATAGTTTGCTTTAAAAGGACAATTTGACATTTTATT  50

seq1  GCCTTTACAATTTATTTTCCTGATATCTTAAGGCTGTAAAGTATATTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTACAATTTATTTTCCTGATATCTTAAGGCTGTAAAGTATATTAGA  100

seq1  TATGAGATATAGGATATGAGAAATAATCTATCTA------TCTATCTCTA  144
      ||||||||||||||||||||||||||||||||||      ||||||||||
seq2  TATGAGATATAGGATATGAGAAATAATCTATCTATCTATCTCTATCTCTA  150

seq1  TCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATC  200

seq1  TCTATCTATATCTATATCTATGGAGAGAGAGAGAGAGATTGCAGTTATCT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTATATCTATATCTATGGAGAGAGAGAGAGAGATTGCAGTTATCT  250

seq1  CACAGTAAGTTATCTACTGACAATGATTTTTATATAGGAAAGTTATGGAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAAGTTATCTACTGACAATGATTTTTATATAGGAAAGTTATGGAA  300

seq1  GGAAGTCAAAGACACTTTTTCATTTGGTGATTATATTTAATACGTACAGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCAAAGACACTTTTTCATTTGGTGATTATATTTAATACGTACAGC  350

seq1  TCTCTCAGGTCCTGGAAAAAGATATTCCTGTTTTGTAAATGGCAACAGGC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAGGTCCTGGAAAAAGATATTCCTGTTTTGTAAATGGCAACAGGC  400

seq1  TTTCCAAACAGATTTATCATCAGACACAAAAAGAATTTATAATTTCAAGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAACAGATTTATCATCAGACACAAAAAGAATTTATAATTTCAAGC  450

seq1  ATTTTAAAGTGAATGTTCTAAGAAAAGATAAGTAAGAGGCTGGAGTTGGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGTGAATGTTCTAAGAAAAGATAAGTAAGAGGCTGGAGTTGGG  500

seq1  AAGAAACCCAAGTGGCTGAAAGAAAGAAAGACCATCTTGCTTGGATAAGT  544
      |||||  ||||||||||| |||||   ||||||||||||||| |||||||
seq2  AAGAA--CCAAGTGGCTG-AAGAA--GAAGACCATCTTGCTT-GATAAGT  544

seq1  ATATGTGATCATTCTATAATCTGGGCCTGTATCCTATGAGCTAGAAATAA  594
      ||||||||||||||||| ||||||  ||||||||||||||||||||   |
seq2  ATATGTGATCATTCTAT-ATCTGG--CTGTATCCTATGAGCTAGAA--TA  589

seq1  CTCCTATAAAACTCTCACTAAGTTCCTGAAATCTAAATGTGATCTAGAGT  644
      || |||| ||||||||||| |||| ||| ||||| |||||||||||||||
seq2  CT-CTAT-AAACTCTCACT-AGTT-CTG-AATCT-AATGTGATCTAGAGT  633

seq1  GAGACAGGAAGTGACCGGAAGCTATGGATATGGGGAATTGTCATAACAAT  694
      |||||| ||||||||||||||||||||||||  ||||||||||||   ||
seq2  GAGACA-GAAGTGACCGGAAGCTATGGATAT--GGAATTGTCATA--CAT  678

seq1  GACAACTCTTTTCCTAGCATTTCAGTGGATTCTCATCTGGAAGACTAAAG  744
      ||||   || ||||||||| |||||| ||||||||||||| |||||||  
seq2  GACA---CTCTTCCTAGCA-TTCAGT-GATTCTCATCTGG-AGACTAA--  720

seq1  GCACAACCAATAATGTACAAAGCTCTGTGGGTCCGGGCTAGAGGTTCAGC  794
      |||| ||||   |||||| ||||||||| ||||   |||||||  |||||
seq2  GCAC-ACCA--TATGTAC-AAGCTCTGT-GGTC---GCTAGAG--TCAGC  760

seq1  ATCAGTCA  802
      ||||||||
seq2  ATCAGTCA  768